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A Taxonomy for Agent-Based Models in Human Infectious Disease Epidemiology

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Agent-based simulation modelling has been used in many epidemiological studies on infectious diseases. However, because agent based modelling is a field without any clear protocol for developing simulations the researcher is given a high amount of flexibility. This flexibility has led to many different forms of agent-based epidemiological simulations. In this paper we review the existing literature on agent-based epidemiological simulation models. From our literature review we identify key similarities and differences in the exisiting simulations. We then use these similarities and differences to create a taxonomy of agent-based epidemiological models and show how the taxonomy can be used.

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  • Elizabeth Hunter & Brian Mac Namee & John D. Kelleher, 2017. "A Taxonomy for Agent-Based Models in Human Infectious Disease Epidemiology," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 20(3), pages 1-2.
    • Handle: RePEc:jas:jasssj:2016-84-3
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    1. Carol Y. Lin, 2008. "Modeling Infectious Diseases in Humans and Animals by KEELING, M. J. and ROHANI, P," Biometrics, The International Biometric Society, vol. 64(3), pages 993-993, September.
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    1. Yifan Wu & Fan Zhang & Albert P. C. Chan & Dezhi Li, 2025. "Sentiment Evolution of Online Public Opinion of Emergency Situations in Railway Stations: A Case Study of Wuhan Railway Stations," Sustainability, MDPI, vol. 17(2), pages 1-29, January.
    2. Andrea Guazzini & Mirko Duradoni & Alessandro Lazzeri & Giorgio Gronchi, 2018. "Simulating the Cost of Cooperation: A Recipe for Collaborative Problem-Solving," Future Internet, MDPI, vol. 10(6), pages 1-17, June.
    3. Priscilla Avegliano & Jaime Simão Sichman, 2023. "Equation-Based Versus Agent-Based Models: Why Not Embrace Both for an Efficient Parameter Calibration?," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 26(4), pages 1-3.
    4. Winston Garira & Kizito Muzhinji, 2023. "The Universal Theory for Multiscale Modelling of Infectious Disease Dynamics," Mathematics, MDPI, vol. 11(18), pages 1-40, September.
    5. repec:plo:pone00:0221564 is not listed on IDEAS
    6. Elizabeth Hunter & Brian Mac Namee & John Kelleher, 2018. "An open-data-driven agent-based model to simulate infectious disease outbreaks," PLOS ONE, Public Library of Science, vol. 13(12), pages 1-35, December.
    7. Ali Asgary & Hudson Blue & Adriano O. Solis & Zachary McCarthy & Mahdi Najafabadi & Mohammad Ali Tofighi & Jianhong Wu, 2022. "Modeling COVID-19 Outbreaks in Long-Term Care Facilities Using an Agent-Based Modeling and Simulation Approach," IJERPH, MDPI, vol. 19(5), pages 1-16, February.
    8. repec:plo:pcbi00:1007734 is not listed on IDEAS
    9. Talal Daghriri & Michael Proctor & Sarah Matthews, 2022. "Evolution of Select Epidemiological Modeling and the Rise of Population Sentiment Analysis: A Literature Review and COVID-19 Sentiment Illustration," IJERPH, MDPI, vol. 19(6), pages 1-20, March.
    10. Jagoda Kaszowska-Mojsa & Przemyslaw Wlodarczyk, 2020. "To freeze or not to freeze? Epidemic prevention and control in the DSGE model with agent-based epidemic component," Lodz Economics Working Papers 3/2020, University of Lodz, Faculty of Economics and Sociology.
    11. repec:plo:pone00:0226483 is not listed on IDEAS
    12. Bisin, Alberto & Moro, Andrea, 2022. "JUE insight: Learning epidemiology by doing: The empirical implications of a Spatial-SIR model with behavioral responses," Journal of Urban Economics, Elsevier, vol. 127(C).
    13. Pilar Hernández & Carlos Pena & Alberto Ramos & Juan José Gómez-Cadenas, 2021. "A new formulation of compartmental epidemic modelling for arbitrary distributions of incubation and removal times," PLOS ONE, Public Library of Science, vol. 16(2), pages 1-22, February.
    14. Beate Jahn & Sarah Friedrich & Joachim Behnke & Joachim Engel & Ursula Garczarek & Ralf Münnich & Markus Pauly & Adalbert Wilhelm & Olaf Wolkenhauer & Markus Zwick & Uwe Siebert & Tim Friede, 2022. "On the role of data, statistics and decisions in a pandemic," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 106(3), pages 349-382, September.
    15. Franziska Taeger & Lena Mende & Steffen Fleßa, 2025. "Modelling epidemiological and economics processes – the case of cervical cancer," Health Economics Review, Springer, vol. 15(1), pages 1-20, December.
    16. Maya Horii & Aidan Gould & Zachary Yun & Jaideep Ray & Cosmin Safta & Tarek Zohdi, 2024. "Calibration verification for stochastic agent-based disease spread models," PLOS ONE, Public Library of Science, vol. 19(12), pages 1-30, December.
    17. Elizabeth Hunter & Brian Mac Namee & John D. Kelleher, 2020. "A Model for the Spread of Infectious Diseases in a Region," IJERPH, MDPI, vol. 17(9), pages 1-19, April.
    18. Constanza Fosco & Felipe Zurita, 2021. "Assessing the short-run effects of lockdown policies on economic activity, with an application to the Santiago Metropolitan Region, Chile," PLOS ONE, Public Library of Science, vol. 16(6), pages 1-23, June.

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