Content
February 2010, Volume 5, Issue 2
- 1-12 The Dynamics of Transmission and Spatial Distribution of Malaria in Riverside Areas of Porto Velho, Rondônia, in the Amazon Region of Brazil
by Tony Hiroshi Katsuragawa & Luiz Herman Soares Gil & Mauro Shugiro Tada & Alexandre de Almeida e Silva & Joana D'Arc Neves Costa & Maisa da Silva Araújo & Ana Lúcia Escobar & Luiz Hildebrando Pereira da Silva - 1-12 High-Precision Radiosurgical Dose Delivery by Interlaced Microbeam Arrays of High-Flux Low-Energy Synchrotron X-Rays
by Raphaël Serduc & Elke Bräuer-Krisch & Erik A Siegbahn & Audrey Bouchet & Benoit Pouyatos & Romain Carron & Nicolas Pannetier & Luc Renaud & Gilles Berruyer & Christian Nemoz & Thierry Brochard & Chantal Rémy & Emmanuel L Barbier & Alberto Bravin & Géraldine Le Duc & Antoine Depaulis & François Estève & Jean A Laissue - 1-12 Plasma Protein Biomarkers for Depression and Schizophrenia by Multi Analyte Profiling of Case-Control Collections
by Enrico Domenici & David R Willé & Federica Tozzi & Inga Prokopenko & Sam Miller & Astrid McKeown & Claire Brittain & Dan Rujescu & Ina Giegling & Christoph W Turck & Florian Holsboer & Edward T Bullmore & Lefkos Middleton & Emilio Merlo-Pich & Robert C Alexander & Pierandrea Muglia - 1-13 Agent-Based Modeling of Endotoxin-Induced Acute Inflammatory Response in Human Blood Leukocytes
by Xu Dong & Panagiota T Foteinou & Steven E Calvano & Stephen F Lowry & Ioannis P Androulakis - 1-13 Delayed Onset of Positive Feedback Activation of Rab5 by Rabex-5 and Rabaptin-5 in Endocytosis
by Huaiping Zhu & Hong Qian & Guangpu Li - 1-14 Can Power-Law Scaling and Neuronal Avalanches Arise from Stochastic Dynamics?
by Jonathan Touboul & Alain Destexhe - 1-15 Classification of Genes and Putative Biomarker Identification Using Distribution Metrics on Expression Profiles
by Hung-Chung Huang & Daniel Jupiter & Vincent VanBuren - 1-15 Causal Relationship of Susceptibility Genes to Ischemic Stroke: Comparison to Ischemic Heart Disease and Biochemical Determinants
by Paul Bentley & George Peck & Liam Smeeth & John Whittaker & Pankaj Sharma - 1-15 Identifying Prototypical Components in Behaviour Using Clustering Algorithms
by Elke Braun & Bart Geurten & Martin Egelhaaf - 1-16 Impact of the Infection Period Distribution on the Epidemic Spread in a Metapopulation Model
by Elisabeta Vergu & Henri Busson & Pauline Ezanno - 1-18 Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges
by Robert J Prill & Daniel Marbach & Julio Saez-Rodriguez & Peter K Sorger & Leonidas G Alexopoulos & Xiaowei Xue & Neil D Clarke & Gregoire Altan-Bonnet & Gustavo Stolovitzky
January 2010, Volume 5, Issue 1
- 1-4 TreeVector: Scalable, Interactive, Phylogenetic Trees for the Web
by Ralph Pethica & Gary Barker & Tim Kovacs & Julian Gough - 1-6 Anaesthesia Monitoring by Recurrence Quantification Analysis of EEG Data
by Klaus Becker & Gerhard Schneider & Matthias Eder & Andreas Ranft & Eberhard F Kochs & Walter Zieglgänsberger & Hans-Ulrich Dodt - 1-6 Two Forms of Activation-Induced Cytidine Deaminase Differing in Their Ability to Bind Agarose
by Mirjam Metzner & Wolfgang Schuh & Edith Roth & Hans-Martin Jäck & Matthias Wabl - 1-6 Accuracy and Reliability of Pallor for Detecting Anaemia: A Hospital-Based Diagnostic Accuracy Study
by Ashwini Kalantri & Mandar Karambelkar & Rajnish Joshi & Shriprakash Kalantri & Ulhas Jajoo - 1-6 The Impact of Realistic Age Structure in Simple Models of Tuberculosis Transmission
by Ellen Brooks-Pollock & Ted Cohen & Megan Murray - 1-6 Multiple Imputations Applied to the DREAM3 Phosphoproteomics Challenge: A Winning Strategy
by Nicolas Guex & Eugenia Migliavacca & Ioannis Xenarios - 1-6 Socioeconomic Status and Subclinical Coronary Disease in the Whitehall II Epidemiological Study
by Andrew Steptoe & Mark Hamer & Katie O'Donnell & Shreenidhi Venuraju & Michael G Marmot & Avijit Lahiri - 1-6 Parameter Identifiability and Redundancy: Theoretical Considerations
by Mark P Little & Wolfgang F Heidenreich & Guangquan Li - 1-7 A Phase II Trial of the Epothilone B Analog Ixabepilone (BMS-247550) in Patients with Metastatic Melanoma
by Patrick A Ott & Anne Hamilton & Amanda Jones & Naomi Haas & Tsiporah Shore & Sandra Liddell & Paul J Christos & L Austin Doyle & Michael Millward & Franco M Muggia & Anna C Pavlick - 1-7 Sleep Deprivation Influences Diurnal Variation of Human Time Perception with Prefrontal Activity Change: A Functional Near-Infrared Spectroscopy Study
by Takahiro Soshi & Kenichi Kuriyama & Sayaka Aritake & Minori Enomoto & Akiko Hida & Miyuki Tamura & Yoshiharu Kim & Kazuo Mishima - 1-7 Conditional Knockout of NMDA Receptors in Dopamine Neurons Prevents Nicotine-Conditioned Place Preference
by Lei Phillip Wang & Fei Li & Xiaoming Shen & Joe Z Tsien - 1-7 Democrats and Republicans Can Be Differentiated from Their Faces
by Nicholas O Rule & Nalini Ambady - 1-7 Reaction Factoring and Bipartite Update Graphs Accelerate the Gillespie Algorithm for Large-Scale Biochemical Systems
by Sagar Indurkhya & Jacob Beal - 1-7 Mapping Change in Large Networks
by Martin Rosvall & Carl T Bergstrom - 1-7 A Role for BK Channels in Heart Rate Regulation in Rodents
by Wendy L Imlach & Sarah C Finch & John H Miller & Andrea L Meredith & Julie E Dalziel - 1-7 Risk Factors for Treatment Default among Re-Treatment Tuberculosis Patients in India, 2006
by Ugra Mohan Jha & Srinath Satyanarayana & Puneet K Dewan & Sarabjit Chadha & Fraser Wares & Suvanand Sahu & Devesh Gupta & L S Chauhan - 1-7 Phase 1 Safety and Immunogenicity Evaluation of ADMVA, a Multigenic, Modified Vaccinia Ankara-HIV-1 B'/C Candidate Vaccine
by Sandhya Vasan & Sarah J Schlesinger & Zhiwei Chen & Arlene Hurley & Angela Lombardo & Soe Than & Phumla Adesanya & Catherine Bunce & Mark Boaz & Rosanne Boyle & Eddy Sayeed & Lorna Clark & Daniel Dugin & Mar Boente-Carrera & Claudia Schmidt & Qing Fang & Ba Lei & Yaoxing Huang & Gerasimos J Zaharatos & David F Gardiner & Marina Caskey & Laura Seamons & Martin Ho & Len Dally & Carol Smith & Josephine Cox & Dilbinder Gill & Jill Gilmour & Michael C Keefer & Patricia Fast & David D Ho - 1-7 Does Modality of Survey Administration Impact Data Quality: Audio Computer Assisted Self Interview (ACASI) Versus Self-Administered Pen and Paper?
by William M Reichmann & Elena Losina & George R Seage III & Christian Arbelaez & Steven A Safren & Jeffrey N Katz & Adam Hetland & Rochelle P Walensky - 1-8 Analysis of Compound Synergy in High-Throughput Cellular Screens by Population-Based Lifetime Modeling
by Martin Peifer & Jonathan Weiss & Martin L Sos & Mirjam Koker & Stefanie Heynck & Christian Netzer & Stefanie Fischer & Haridas Rode & Daniel Rauh & Jörg Rahnenführer & Roman K Thomas - 1-8 Antagonistic Parent-Offspring Co-Adaptation
by Mathias Kölliker & Benjamin J Ridenhour & Sabrina Gaba - 1-8 Automated Discovery of Novel Drug Formulations Using Predictive Iterated High Throughput Experimentation
by Filippo Caschera & Gianluca Gazzola & Mark A Bedau & Carolina Bosch Moreno & Andrew Buchanan & James Cawse & Norman Packard & Martin M Hanczyc - 1-8 A Statistical Method for the Detection of Alternative Splicing Using RNA-Seq
by Liguo Wang & Yuanxin Xi & Jun Yu & Liping Dong & Laising Yen & Wei Li - 1-8 Structure Learning in a Sensorimotor Association Task
by Daniel A Braun & Stephan Waldert & Ad Aertsen & Daniel M Wolpert & Carsten Mehring - 1-9 Evaluating Different Dimensions of Programme Effectiveness for Private Medicine Retailer Malaria Control Interventions in Kenya
by Timothy O Abuya & Greg Fegan & Abdinasir A Amin & Willis S Akhwale & Abdisalan M Noor & Robert W Snow & Vicki Marsh - 1-9 Site and Strain-Specific Variation in Gut Microbiota Profiles and Metabolism in Experimental Mice
by Melissa K Friswell & Helen Gika & Ian J Stratford & Georgios Theodoridis & Brian Telfer & Ian D Wilson & Andrew J McBain - 1-9 Waves of Adipose Tissue Growth in the Genetically Obese Zucker Fatty Rat
by Jennifer MacKellar & Samuel W Cushman & Vipul Periwal - 1-9 Dynamic Networks from Hierarchical Bayesian Graph Clustering
by Yongjin Park & Cristopher Moore & Joel S Bader - 1-9 Molecular Interaction Studies of Trimethoxy Flavone with Human Serum Albumin
by Mahesh Gokara & Babu Sudhamalla & Damu G Amooru & Rajagopal Subramanyam - 1-9 Using Small-Scale Studies to Prioritize Threats and Guide Recovery of a Rare Hemiparasitic Plant: Cordylanthus rigidus ssp. littoralis
by Sean M Watts & Melissa M Uhl & Stephen P Maurano & Erin E Nuccio - 1-9 Rapid Genomic Characterization of the Genus Vitis
by Sean Myles & Jer-Ming Chia & Bonnie Hurwitz & Charles Simon & Gan Yuan Zhong & Edward Buckler & Doreen Ware - 1-9 Using Ecological Null Models to Assess the Potential for Marine Protected Area Networks to Protect Biodiversity
by Brice X Semmens & Peter J Auster & Michelle J Paddack - 1-9 Phase 1 Trial of the Plasmodium falciparum Blood Stage Vaccine MSP142-C1/Alhydrogel with and without CPG 7909 in Malaria Naïve Adults
by Ruth D Ellis & Laura B Martin & Donna Shaffer & Carole A Long & Kazutoyo Miura & Michael P Fay & David L Narum & Daming Zhu & Gregory E D Mullen & Siddhartha Mahanty & Louis H Miller & Anna P Durbin - 1-9 Patterns of Urban Violent Injury: A Spatio-Temporal Analysis
by Michael Cusimano & Sean Marshall & Claus Rinner & Depeng Jiang & Mary Chipman - 1-9 A Novel Alignment-Free Method for Comparing Transcription Factor Binding Site Motifs
by Minli Xu & Zhengchang Su - 1-9 Human Ovarian Reserve from Conception to the Menopause
by W Hamish B Wallace & Thomas W Kelsey - 1-9 Improved Reconstruction of In Silico Gene Regulatory Networks by Integrating Knockout and Perturbation Data
by Kevin Y Yip & Roger P Alexander & Koon-Kiu Yan & Mark Gerstein - 1-9 Methamphetamine Self-Administration Is Associated with Persistent Biochemical Alterations in Striatal and Cortical Dopaminergic Terminals in the Rat
by Irina N Krasnova & Zuzana Justinova & Bruce Ladenheim & Subramaniam Jayanthi & Michael T McCoy & Chanel Barnes & John E Warner & Steven R Goldberg & Jean Lud Cadet - 1-9 Cognitive and Motivational Requirements for the Emergence of Cooperation in a Rat Social Game
by Duarte S Viana & Isabel Gordo & Élio Sucena & Marta A P Moita - 1-9 An Iterative Approach for Generating Statistically Realistic Populations of Households
by Floriana Gargiulo & Sônia Ternes & Sylvie Huet & Guillaume Deffuant - 1-9 Effect of Leucovorin (Folinic Acid) on the Developmental Quotient of Children with Down's Syndrome (Trisomy 21) and Influence of Thyroid Status
by Henri Blehaut & Clotilde Mircher & Aimé Ravel & Martine Conte & Veronique de Portzamparc & Gwendael Poret & Françoise Huon de Kermadec & Marie-Odile Rethore & Franck G Sturtz - 1-10 Identifying Thresholds for Ecosystem-Based Management
by Jameal F Samhouri & Phillip S Levin & Cameron H Ainsworth - 1-10 Characteristics of Motor Resonance Predict the Pattern of Flash-Lag Effects for Biological Motion
by Klaus Kessler & Lucy Gordon & Kari Cessford & Martin Lages - 1-11 Viability and Resilience of Languages in Competition
by Laetitia Chapel & Xavier Castelló & Claire Bernard & Guillaume Deffuant & Víctor M Eguíluz & Sophie Martin & Maxi San Miguel - 1-11 Regulation of Gene Expression by PI3K in Mouse Growth Plate Chondrocytes
by Veronica Ulici & Claudine G James & Katie D Hoenselaar & Frank Beier - 1-11 Relative Contributions of Geographic, Socioeconomic, and Lifestyle Factors to Quality of Life, Frailty, and Mortality in Elderly
by Jean Woo & Ruth Chan & Jason Leung & Moses Wong - 1-12 Processivity and Coupling in Messenger RNA Transcription
by Stuart Aitken & Marie-Cécile Robert & Ross D Alexander & Igor Goryanin & Edouard Bertrand & Jean D Beggs - 1-12 Dermatoglyphics from All Chinese Ethnic Groups Reveal Geographic Patterning
by Hai-Guo Zhang & Yao-Fong Chen & Ming Ding & Li Jin & D Troy Case & Yun-Ping Jiao & Xian-Ping Wang & Chong-Xian Bai & Gang Jin & Jiang-Ming Yang & Han Wang & Jian-Bing Yuan & Wei Huang & Zhu-Gang Wang & Ren-Biao Chen - 1-13 Development of a Three Dimensional Multiscale Computational Model of the Human Epidermis
by Salem Adra & Tao Sun & Sheila MacNeil & Mike Holcombe & Rod Smallwood - 1-13 Genome Wide Association for Addiction: Replicated Results and Comparisons of Two Analytic Approaches
by Tomas Drgon & Ping-Wu Zhang & Catherine Johnson & Donna Walther & Judith Hess & Michelle Nino & George R Uhl - 1-15 Song Practice Promotes Acute Vocal Variability at a Key Stage of Sensorimotor Learning
by Julie E Miller & Austin T Hilliard & Stephanie A White - 1-15 A Neurosemantic Theory of Concrete Noun Representation Based on the Underlying Brain Codes
by Marcel Adam Just & Vladimir L Cherkassky & Sandesh Aryal & Tom M Mitchell - 1-15 Genome-Wide Analysis of Binding Sites and Direct Target Genes of the Orphan Nuclear Receptor NR2F1/COUP-TFI
by Celina Montemayor & Oscar A Montemayor & Alex Ridgeway & Feng Lin & David A Wheeler & Scott D Pletcher & Fred A Pereira - 1-17 Structural Analysis to Determine the Core of Hypoxia Response Network
by Monika Heiner & K Sriram - 1-20 Critical Structural and Functional Roles for the N-Terminal Insertion Sequence in Surfactant Protein B Analogs
by Frans J Walther & Alan J Waring & Jose M Hernandez-Juviel & Larry M Gordon & Zhengdong Wang & Chun-Ling Jung & Piotr Ruchala & Andrew P Clark & Wesley M Smith & Shantanu Sharma & Robert H Notter
December 2009, Volume 4, Issue 12
- 1-4 Universal Behavior of Extreme Price Movements in Stock Markets
by Miguel A Fuentes & Austin Gerig & Javier Vicente - 1-4 Monoamine Oxidase A Gene (MAOA) Associated with Attitude Towards Longshot Risks
by Songfa Zhong & Salomon Israel & Hong Xue & Richard P Ebstein & Soo Hong Chew - 1-5 Systematic Differences in Impact across Publication Tracks at PNAS
by David G Rand & Thomas Pfeiffer - 1-5 Impact of Rescue-Thrombolysis during Cardiopulmonary Resuscitation in Patients with Pulmonary Embolism
by Fikret Er & Amir M Nia & Natig Gassanov & Evren Caglayan & Erland Erdmann & Uta C Hoppe - 1-6 PALM: A Paralleled and Integrated Framework for Phylogenetic Inference with Automatic Likelihood Model Selectors
by Shu-Hwa Chen & Sheng-Yao Su & Chen-Zen Lo & Kuei-Hsien Chen & Teng-Jay Huang & Bo-Han Kuo & Chung-Yen Lin - 1-6 The Level and Duration of RSV-Specific Maternal IgG in Infants in Kilifi Kenya
by Rachel Ochola & Charles Sande & Gregory Fegan & Paul D Scott & Graham F Medley & Patricia A Cane & D James Nokes - 1-6 Age at Puberty and the Emerging Obesity Epidemic
by Lise Aksglaede & Anders Juul & Lina W Olsen & Thorkild I A Sørensen - 1-6 Alternation of Sound Location Induces Visual Motion Perception of a Static Object
by Souta Hidaka & Yuko Manaka & Wataru Teramoto & Yoichi Sugita & Ryota Miyauchi & Jiro Gyoba & Yôiti Suzuki & Yukio Iwaya - 1-6 Differential Effects of Thiazolidinediones on Adipocyte Growth and Recruitment in Zucker Fatty Rats
by Jennifer MacKellar & Samuel W Cushman & Vipul Periwal - 1-6 Clustering of Socioeconomic, Behavioural, and Neonatal Risk Factors for Infant Health in Pregnant Smokers
by Caren I Lanting & Simone E Buitendijk & Matty R Crone & Dewi Segaar & Jack Bennebroek Gravenhorst & Jacobus P van Wouwe - 1-6 Optimizing Odor-Baited Trap Methods for Collecting Mosquitoes during the Malaria Season in The Gambia
by Musa Jawara & Renate C Smallegange & David Jeffries & Davis C Nwakanma & Taiwo Samson Awolola & Bart G J Knols & Willem Takken & David J Conway - 1-6 Laplacian Eigenfunctions Learn Population Structure
by Jun Zhang & Partha Niyogi & Mary Sara McPeek - 1-6 Parameter Identifiability and Redundancy in a General Class of Stochastic Carcinogenesis Models
by Mark P Little & Wolfgang F Heidenreich & Guangquan Li - 1-6 Normative Data for the 12 Item WHO Disability Assessment Schedule 2.0
by Gavin Andrews & Alice Kemp & Matthew Sunderland & Michael Von Korff & Tevik Bedirhan Ustun - 1-6 Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
by Ludmil B Alexandrov & Stoyana Alexandrova & Anny Usheva - 1-7 An Experiment on Prediction Markets in Science
by Johan Almenberg & Ken Kittlitz & Thomas Pfeiffer - 1-7 Eukaryotic Initiation Factor 2B (eIF2B) GEF Activity as a Diagnostic Tool for EIF2B-Related Disorders
by Laetitia Horzinski & Aurélia Huyghe & Marie-Céleste Cardoso & Céline Gonthier & Lemlih Ouchchane & Raphael Schiffmann & Pierre Blanc & Odile Boespflug-Tanguy & Anne Fogli - 1-7 Testosterone Administration Decreases Generosity in the Ultimatum Game
by Paul J Zak & Robert Kurzban & Sheila Ahmadi & Ronald S Swerdloff & Jang Park & Levan Efremidze & Karen Redwine & Karla Morgan & William Matzner - 1-7 Prediction of Pharmacological and Xenobiotic Responses to Drugs Based on Time Course Gene Expression Profiles
by Tao Huang & WeiRen Cui & LeLe Hu & KaiYan Feng & Yi-Xue Li & Yu-Dong Cai - 1-7 School Variation in Asthma: Compositional or Contextual?
by Tracy K Richmond & S V Subramanian - 1-7 Deletion of RAGE Causes Hyperactivity and Increased Sensitivity to Auditory Stimuli in Mice
by Seiichi Sakatani & Kazuyuki Yamada & Chihiro Homma & Seiichi Munesue & Yasuhiko Yamamoto & Hiroshi Yamamoto & Hajime Hirase - 1-7 Birth Weight in Relation to Leisure Time Physical Activity in Adolescence and Adulthood: Meta-Analysis of Results from 13 Nordic Cohorts
by Lise Geisler Andersen & Lars Ängquist & Michael Gamborg & Liisa Byberg & Calle Bengtsson & Dexter Canoy & Johan G Eriksson & Marit Eriksson & Marjo-Riitta Järvelin & Lauren Lissner & Tom I Nilsen & Merete Osler & Kim Overvad & Finn Rasmussen & Minna K Salonen & Lene Schack-Nielsen & Tuija H Tammelin & Tomi-Pekka Tuomainen & Thorkild I A Sørensen & Jennifer L Baker & for the NordNet Study Group - 1-7 Causes of Early Childhood Deaths in Urban Dhaka, Bangladesh
by Amal K Halder & Emily S Gurley & Aliya Naheed & Samir K Saha & W Abdullah Brooks & Shams El Arifeen & Hossain M S Sazzad & Eben Kenah & Stephen P Luby - 1-8 Investigating the Role of Mitochondrial Haplogroups in Genetic Predisposition to Meningococcal Disease
by Antonio Salas & Laura Fachal & Sonia Marcos-Alonso & Ana Vega & Federico Martinón-Torres & Grupo de investigación ESIGEM (Estudio Sobre la Influencia Genética en la Enfermedad Meningocócica) ¶ - 1-8 Ambulatory-Based Standardized Therapy for Multi-Drug Resistant Tuberculosis: Experience from Nepal, 2005–2006
by Pushpa Malla & Elisabeth Eva Kanitz & Mohammad Akhtar & Dennis Falzon & Knut Feldmann & Christian Gunneberg & Shyam Sundar Jha & Bhagwan Maharjan & Mohan Kumar Prasai & Bhabana Shrestha & Sharat Chandra Verma & Matteo Zignol - 1-8 Within-Subject Variability of Interferon-g Assay Results for Tuberculosis and Boosting Effect of Tuberculin Skin Testing: A Systematic Review
by Richard N van Zyl-Smit & Alice Zwerling & Keertan Dheda & Madhukar Pai - 1-8 Effective Identification of Conserved Pathways in Biological Networks Using Hidden Markov Models
by Xiaoning Qian & Byung-Jun Yoon - 1-8 Clinical and Financial Outcomes Due to Methicillin Resistant Staphylococcus aureus Surgical Site Infection: A Multi-Center Matched Outcomes Study
by Deverick J Anderson & Keith S Kaye & Luke F Chen & Kenneth E Schmader & Yong Choi & Richard Sloane & Daniel J Sexton - 1-8 Impact of Previous Virological Treatment Failures and Adherence on the Outcome of Antiretroviral Therapy in 2007
by Marie Ballif & Bruno Ledergerber & Manuel Battegay & Matthias Cavassini & Enos Bernasconi & Patrick Schmid & Bernard Hirschel & Hansjakob Furrer & Martin Rickenbach & Milos Opravil & Rainer Weber & the Swiss HIV Cohort Study ¶ - 1-8 Plasma Levels of Transforming Growth Factor-β1 Reflect Left Ventricular Remodeling in Aortic Stenosis
by Ana V Villar & Manuel Cobo & Miguel Llano & Cecilia Montalvo & Francisco González-Vílchez & Rafael Martín-Durán & María A Hurlé & J Francisco Nistal - 1-8 Early Assessment of Anxiety and Behavioral Response to Novel Swine-Origin Influenza A(H1N1)
by James Holland Jones & Marcel Salathé - 1-8 Steered Molecular Dynamics Simulations Reveal the Likelier Dissociation Pathway of Imatinib from Its Targeting Kinases c-Kit and Abl
by Li-Jun Yang & Jun Zou & Huan-Zhang Xie & Lin-Li Li & Yu-Quan Wei & Sheng-Yong Yang - 1-8 Ground State Robustness as an Evolutionary Design Principle in Signaling Networks
by Önder Kartal & Oliver Ebenhöh - 1-9 A High-Throughput DNA Sequence Aligner for Microbial Ecology Studies
by Patrick D Schloss - 1-9 Scalable Steady State Analysis of Boolean Biological Regulatory Networks
by Ferhat Ay & Fei Xu & Tamer Kahveci - 1-9 Improving the Clinical Diagnosis of Influenza—a Comparative Analysis of New Influenza A (H1N1) Cases
by Adrian K Ong & Mark I Chen & Li Lin & Adriana S Tan & Ni Win Nwe & Timothy Barkham & Seow Yian Tay & Yee Sin Leo - 1-9 Family-Based Bivariate Association Tests for Quantitative Traits
by Lei Zhang & Aaron J Bonham & Jian Li & Yu-Fang Pei & Jie Chen & Christopher J Papasian & Hong-Wen Deng - 1-9 Insufficient Milk Supply and Breast Cancer Risk: A Systematic Review
by Jacqueline M Cohen & Jennifer A Hutcheon & Sofi G Julien & Michel L Tremblay & Rebecca Fuhrer - 1-9 Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler
by Daniel R Zerbino & Gayle K McEwen & Elliott H Margulies & Ewan Birney - 1-9 Culture Modulates Eye-Movements to Visual Novelty
by Joshua O Goh & Jiat Chow Tan & Denise C Park - 1-10 Accurate and Reliable Cancer Classification Based on Probabilistic Inference of Pathway Activity
by Junjie Su & Byung-Jun Yoon & Edward R Dougherty - 1-10 How to Turn a Genetic Circuit into a Synthetic Tunable Oscillator, or a Bistable Switch
by Lucia Marucci & David A W Barton & Irene Cantone & Maria Aurelia Ricci & Maria Pia Cosma & Stefania Santini & Diego di Bernardo & Mario di Bernardo - 1-10 In Vivo Dynamical Interactions between CD4 Tregs, CD8 Tregs and CD4+CD25− Cells in Mice
by Arnon Arazi & Amir Sharabi & Heidy Zinger & Edna Mozes & Avidan U Neumann - 1-10 Peeling Plaids Apart: Context Counteracts Cross-Orientation Contrast Masking
by Elliot Freeman & Preeti Verghese - 1-11 Intraclonal Protein Expression Heterogeneity in Recombinant CHO Cells
by Warren Pilbrough & Trent P Munro & Peter Gray - 1-11 Generating Triangulated Macromolecular Surfaces by Euclidean Distance Transform
by Dong Xu & Yang Zhang - 1-11 A Comparison of the Wellbeing of Orphans and Abandoned Children Ages 6–12 in Institutional and Community-Based Care Settings in 5 Less Wealthy Nations
by Kathryn Whetten & Jan Ostermann & Rachel A Whetten & Brian W Pence & Karen O'Donnell & Lynne C Messer & Nathan M Thielman & The Positive Outcomes for Orphans (POFO) Research Team - 1-12 Examination of Genome Homogeneity in Prokaryotes Using Genomic Signatures
by Jon Bohlin & Eystein Skjerve - 1-12 An Information Gap in DNA Evidence Interpretation
by Mark W Perlin & Alexander Sinelnikov - 1-12 The Acrylamide (S)-2 As a Positive and Negative Modulator of Kv7 Channels Expressed in Xenopus laevis Oocytes
by Sigrid Marie Blom & Nicole Schmitt & Henrik Sindal Jensen - 1-12 Long-Branch Attraction Bias and Inconsistency in Bayesian Phylogenetics
by Bryan Kolaczkowski & Joseph W Thornton - 1-12 Anti-dsDNA Antibodies Promote Initiation, and Acquired Loss of Renal Dnase1 Promotes Progression of Lupus Nephritis in Autoimmune (NZBxNZW)F1 Mice
by Kristin Fenton & Silje Fismen & Annica Hedberg & Natalya Seredkina & Chris Fenton & Elin Synnøve Mortensen & Ole Petter Rekvig - 1-12 A Dynamic Analysis of IRS-PKR Signaling in Liver Cells: A Discrete Modeling Approach
by Ming Wu & Xuerui Yang & Christina Chan - 1-12 A Cellular Automata-Based Mathematical Model for Thymocyte Development
by Hallan Souza-e-Silva & Wilson Savino & Raúl A Feijóo & Ana Tereza Ribeiro Vasconcelos - 1-13 Sub-Optimal Allocation of Time in Sequential Movements
by Shih-Wei Wu & Maria F Dal Martello & Laurence T Maloney - 1-13 A Large Scale Analysis of Information-Theoretic Network Complexity Measures Using Chemical Structures
by Matthias Dehmer & Nicola Barbarini & Kurt Varmuza & Armin Graber - 1-13 Exploring Hypotheses of the Actions of TGF-β1 in Epidermal Wound Healing Using a 3D Computational Multiscale Model of the Human Epidermis
by Tao Sun & Salem Adra & Rod Smallwood & Mike Holcombe & Sheila MacNeil - 1-13 AutoEPG: Software for the Analysis of Electrical Activity in the Microcircuit Underpinning Feeding Behaviour of Caenorhabditis elegans
by James Dillon & Ioannis Andrianakis & Kate Bull & Steve Glautier & Vincent O'Connor & Lindy Holden-Dye & Christopher James - 1-14 Fulfilling the Promise of Personalized Medicine? Systematic Review and Field Synopsis of Pharmacogenetic Studies
by Michael V Holmes & Tina Shah & Christine Vickery & Liam Smeeth & Aroon D Hingorani & Juan P Casas - 1-15 A Biochemical Genomics Screen for Substrates of Ste20p Kinase Enables the In Silico Prediction of Novel Substrates
by Robert B Annan & Anna Y Lee & Ian D Reid & Azin Sayad & Malcolm Whiteway & Michael Hallett & David Y Thomas - 1-16 Vector Field Embryogeny
by Till Steiner & Yaochu Jin & Bernhard Sendhoff - 1-19 Applied Climate-Change Analysis: The Climate Wizard Tool
by Evan H Girvetz & Chris Zganjar & George T Raber & Edwin P Maurer & Peter Kareiva & Joshua J Lawler
November 2009, Volume 4, Issue 11
- 1-4 Limits of Principal Components Analysis for Producing a Common Trait Space: Implications for Inferring Selection, Contingency, and Chance in Evolution
by Kevin J Parsons & W James Cooper & R Craig Albertson - 1-4 A Decade Later, How Much of Rwanda's Musculoskeletal Impairment Is Caused by the War in 1994 and by Related Violence?
by Hannah Kuper & Oluwarantimi Atijosan & Dorothea Rischewski & Victoria Simms & Chris Lavy - 1-5 A Note on Trader Sharpe Ratios
by John M Coates & Lionel Page - 1-5 A Prospective Controlled Trial of Routine Opt-Out HIV Testing in a Men's Jail
by Ravi Kavasery & Duncan Smith-Rohrberg Maru & Laurie N Sylla & David Smith & Frederick L Altice - 1-5 The Astronomical Orientation of Ancient Greek Temples
by Alun M Salt - 1-5 Interaction between Plate Make and Protein in Protein Crystallisation Screening
by Gordon J King & Kai-En Chen & Gautier Robin & Jade K Forwood & Begoña Heras & Anil S Thakur & Bostjan Kobe & Simon P Blomberg & Jennifer L Martin - 1-6 The Progressive Increase of Food Waste in America and Its Environmental Impact
by Kevin D Hall & Juen Guo & Michael Dore & Carson C Chow - 1-6 Patients' Perception of Quality of Pre-Operative Informed Consent in Athens, Greece: A Pilot Study
by Matthew E Falagas & Patrick D Akrivos & Vangelis G Alexiou & Vasilios Saridakis & Theofanis Moutos & George Peppas & Barbara K Kondilis - 1-6 Estimation of Immune Cell Densities in Immune Cell Conglomerates: An Approach for High-Throughput Quantification
by Niels Halama & Inka Zoernig & Anna Spille & Kathi Westphal & Peter Schirmacher & Dirk Jaeger & Niels Grabe - 1-6 Modulation of Motor Area Activity by the Outcome for a Player during Observation of a Baseball Game
by Sotaro Shimada - 1-7 What Is the Optimal Value of the g-Ratio for Myelinated Fibers in the Rat CNS? A Theoretical Approach
by Taylor Chomiak & Bin Hu - 1-7 Long-Range Correlation in Synchronization and Syncopation Tapping: A Linear Phase Correction Model
by Didier Delignières & Kjerstin Torre & Loïc Lemoine - 1-7 Male Perspectives on Incorporating Men into Antenatal HIV Counseling and Testing
by David A Katz & James N Kiarie & Grace C John-Stewart & Barbra A Richardson & Francis N John & Carey Farquhar - 1-7 New Policies, New Technologies: Modelling the Potential for Improved Smear Microscopy Services in Malawi
by Andrew Ramsay & Luis E Cuevas & Catherine J F Mundy & Carl-Michael Nathanson & Petros Chirambo & Russell Dacombe & S Bertel Squire & Felix M L Salaniponi & Sera Munthali - 1-7 Common Polymorphisms Influencing Serum Uric Acid Levels Contribute to Susceptibility to Gout, but Not to Coronary Artery Disease
by Klaus Stark & Wibke Reinhard & Martina Grassl & Jeanette Erdmann & Heribert Schunkert & Thomas Illig & Christian Hengstenberg - 1-7 Early Life Exposure to Famine and Colorectal Cancer Risk: A Role for Epigenetic Mechanisms
by Laura A E Hughes & Piet A van den Brandt & Adriaan P de Bruïne & Kim A D Wouters & Sarah Hulsmans & Angela Spiertz & R Alexandra Goldbohm & Anton F P M de Goeij & James G Herman & Matty P Weijenberg & Manon van Engeland - 1-7 Beyond Word Frequency: Bursts, Lulls, and Scaling in the Temporal Distributions of Words
by Eduardo G Altmann & Janet B Pierrehumbert & Adilson E Motter - 1-8 Novel Protein-Protein Interactions Inferred from Literature Context
by Herman H H B M van Haagen & Peter A C 't Hoen & Alessandro Botelho Bovo & Antoine de Morrée & Erik M van Mulligen & Christine Chichester & Jan A Kors & Johan T den Dunnen & Gert-Jan B van Ommen & Silvère M van der Maarel & Vinícius Medina Kern & Barend Mons & Martijn J Schuemie - 1-9 Implications of Conflicting Associations of the Prion Protein (PrP) Gene with Scrapie Susceptibility and Fitness on the Persistence of Scrapie
by Andrea Doeschl-Wilson & Rami Sawalha & Simon Gubbins & Beatriz Villanueva - 1-9 Alien Invasive Slider Turtle in Unpredicted Habitat: A Matter of Niche Shift or of Predictors Studied?
by Dennis Rödder & Sebastian Schmidtlein & Michael Veith & Stefan Lötters - 1-9 Expression Profile of MicroRNAs in Young Stroke Patients
by Kay Sin Tan & Arunmozhiarasi Armugam & Sugunavathi Sepramaniam & Kai Ying Lim & Karolina Dwi Setyowati & Chee Woon Wang & Kandiah Jeyaseelan - 1-9 A Genome-Wide Analysis of Array-Based Comparative Genomic Hybridization (CGH) Data to Detect Intra-Species Variations and Evolutionary Relationships
by Apratim Mitra & George Liu & Jiuzhou Song - 1-10 Dihydroartemisinin-Piperaquine and Artemether-Lumefantrine for Treating Uncomplicated Malaria in African Children: A Randomised, Non-Inferiority Trial
by Quique Bassat & Modest Mulenga & Halidou Tinto & Patrice Piola & Steffen Borrmann & Clara Menéndez & Michael Nambozi & Innocent Valéa & Carolyn Nabasumba & Philip Sasi & Antonella Bacchieri & Marco Corsi & David Ubben & Ambrose Talisuna & Umberto D'Alessandro - 1-10 Size-Sensitive Perceptual Representations Underlie Visual and Haptic Object Recognition
by Matt Craddock & Rebecca Lawson - 1-10 A Method for Investigating Population Declines of Migratory Birds Using Stable Isotopes: Origins of Harvested Lesser Scaup in North America
by Keith A Hobson & Michael B Wunder & Steven L Van Wilgenburg & Robert G Clark & Leonard I Wassenaar - 1-10 The Typical Flight Performance of Blowflies: Measuring the Normal Performance Envelope of Calliphora vicina Using a Novel Corner-Cube Arena
by Richard J Bomphrey & Simon M Walker & Graham K Taylor - 1-10 Novel Rank-Based Statistical Methods Reveal MicroRNAs with Differential Expression in Multiple Cancer Types
by Roy Navon & Hui Wang & Israel Steinfeld & Anya Tsalenko & Amir Ben-Dor & Zohar Yakhini - 1-10 Widespread Dysregulation of MiRNAs by MYCN Amplification and Chromosomal Imbalances in Neuroblastoma: Association of miRNA Expression with Survival
by Isabella Bray & Kenneth Bryan & Suzanne Prenter & Patrick G Buckley & Niamh H Foley & Derek M Murphy & Leah Alcock & Pieter Mestdagh & Jo Vandesompele & Frank Speleman & Wendy B London & Patrick W McGrady & Desmond G Higgins & Anne O'Meara & Maureen O'Sullivan & Raymond L Stallings - 1-10 Quality and Reporting of Diagnostic Accuracy Studies in TB, HIV and Malaria: Evaluation Using QUADAS and STARD Standards
by Patricia Scolari Fontela & Nitika Pant Pai & Ian Schiller & Nandini Dendukuri & Andrew Ramsay & Madhukar Pai - 1-11 Survey of the Quality of Experimental Design, Statistical Analysis and Reporting of Research Using Animals
by Carol Kilkenny & Nick Parsons & Ed Kadyszewski & Michael F W Festing & Innes C Cuthill & Derek Fry & Jane Hutton & Douglas G Altman - 1-11 On Theoretical Models of Gene Expression Evolution with Random Genetic Drift and Natural Selection
by Osamu Ogasawara & Kousaku Okubo - 1-11 Pathway Analysis of GWAS Provides New Insights into Genetic Susceptibility to 3 Inflammatory Diseases
by Hariklia Eleftherohorinou & Victoria Wright & Clive Hoggart & Anna-Liisa Hartikainen & Marjo-Riitta Jarvelin & David Balding & Lachlan Coin & Michael Levin - 1-12 BFAST: An Alignment Tool for Large Scale Genome Resequencing
by Nils Homer & Barry Merriman & Stanley F Nelson - 1-13 Roles of ES Cell-Derived Gliogenic Neural Stem/Progenitor Cells in Functional Recovery after Spinal Cord Injury
by Gentaro Kumagai & Yohei Okada & Junichi Yamane & Narihito Nagoshi & Kazuya Kitamura & Masahiko Mukaino & Osahiko Tsuji & Kanehiro Fujiyoshi & Hiroyuki Katoh & Seiji Okada & Shinsuke Shibata & Yumi Matsuzaki & Satoshi Toh & Yoshiaki Toyama & Masaya Nakamura & Hideyuki Okano
October 2009, Volume 4, Issue 10
- 1-3 Education in Time: Cohort Differences in Educational Attainment in African-American Twins
by Sarah L Szanton & Brandon Johnson & Roland J Thorpe Jr. & Keith Whitfield - 1-4 Calprotectin — A Novel Marker of Obesity
by Ole Hartvig Mortensen & Anders Rinnov Nielsen & Christian Erikstrup & Peter Plomgaard & Christian Philip Fischer & Rikke Krogh-Madsen & Birgitte Lindegaard & Anne Marie Petersen & Sarah Taudorf & Bente Klarlund Pedersen - 1-4 Variation at GRN 3′-UTR rs5848 Is Not Associated with a Risk of Frontotemporal Lobar Degeneration in Dutch Population
by Javier Simón-Sánchez & Harro Seelaar & Zoltán Bochdanovits & Dorly J H Deeg & John C van Swieten & Peter Heutink - 1-5 The Impact of Nature Experience on Willingness to Support Conservation
by Patricia A Zaradic & Oliver R W Pergams & Peter Kareiva - 1-5 Involvement of the Modifier Gene of a Human Mendelian Disorder in a Negative Selection Process
by Isabelle Jéru & Hasmik Hayrapetyan & Philippe Duquesnoy & Emmanuelle Cochet & Jean-Louis Serre & Josué Feingold & Gilles Grateau & Tamara Sarkisian & Marc Jeanpierre & Serge Amselem - 1-5 A New Method for Publishing Three-Dimensional Content
by Eugene Raush & Max Totrov & Brian D Marsden & Ruben Abagyan - 1-5 Discovery of the Largest Orbweaving Spider Species: The Evolution of Gigantism in Nephila
by Matjaž Kuntner & Jonathan A Coddington - 1-6 Increasing Short-Stay Unplanned Hospital Admissions among Children in England; Time Trends Analysis ’97–‘06
by Sonia Saxena & Alex Bottle & Ruth Gilbert & Mike Sharland - 1-6 Exposure to p,p′-DDE: A Risk Factor for Type 2 Diabetes
by Anna Rignell-Hydbom & Jonas Lidfeldt & Hannu Kiviranta & Panu Rantakokko & Göran Samsioe & Carl-David Agardh & Lars Rylander - 1-6 Dominance, Politics, and Physiology: Voters' Testosterone Changes on the Night of the 2008 United States Presidential Election
by Steven J Stanton & Jacinta C Beehner & Ekjyot K Saini & Cynthia M Kuhn & Kevin S LaBar - 1-6 SGC - Structural Biology and Human Health: A New Approach to Publishing Structural Biology Results
by Wen Hwa Lee & Julián Atienza-Herrero & Ruben Abagyan & Brian D Marsden - 1-7 Chimpanzees Help Each Other upon Request
by Shinya Yamamoto & Tatyana Humle & Masayuki Tanaka - 1-7 Mapping Oil and Gas Development Potential in the US Intermountain West and Estimating Impacts to Species
by Holly E Copeland & Kevin E Doherty & David E Naugle & Amy Pocewicz & Joseph M Kiesecker - 1-8 Efficacy of Artesunate + Sulfamethoxypyrazine/Pyrimethamine versus Praziquantel in the Treatment of Schistosoma haematobium in Children
by Mahamadou S Sissoko & Abdoulaye Dabo & Hamidou Traoré & Mouctar Diallo & Boubacar Traoré & Drissa Konaté & Boubacar Niaré & Moussa Diakité & Bourama Kamaté & Abdrahamane Traoré & Aboudramane Bathily & Amadou Tapily & Ousmane B Touré & Sarah Cauwenbergh & Herwig F Jansen & Ogobara K Doumbo - 1-8 Drugs Associated with More Suicidal Ideations Are also Associated with More Suicide Attempts
by Henry T Robertson & David B Allison - 1-8 An Eight-Gene Blood Expression Profile Predicts the Response to Infliximab in Rheumatoid Arthritis
by Antonio Julià & Alba Erra & Carles Palacio & Carlos Tomas & Xavier Sans & Pere Barceló & Sara Marsal - 1-8 Ecological Equivalence: A Realistic Assumption for Niche Theory as a Testable Alternative to Neutral Theory
by C Patrick Doncaster - 1-8 A Comparison of Biomarker Based Incidence Estimators
by Thomas A McWalter & Alex Welte - 1-9 Accounting for Redundancy when Integrating Gene Interaction Databases
by Antigoni Elefsinioti & Marit Ackermann & Andreas Beyer - 1-9 Analysis of Group Randomized Trials with Multiple Binary Endpoints and Small Number of Groups
by Ji-Hyun Lee & Michael J Schell & Richard Roetzheim - 1-9 Species-Specific Traits Rather Than Resource Partitioning Mediate Diversity Effects on Resource Use
by Jasmin A Godbold & Rutger Rosenberg & Martin Solan - 1-9 Multi-Determinants Analysis of Molecular Alterations for Predicting Clinical Benefit to EGFR-Targeted Monoclonal Antibodies in Colorectal Cancer
by Andrea Sartore-Bianchi & Federica Di Nicolantonio & Michele Nichelatti & Francesca Molinari & Sara De Dosso & Piercarlo Saletti & Miriam Martini & Tiziana Cipani & Giovanna Marrapese & Luca Mazzucchelli & Simona Lamba & Silvio Veronese & Milo Frattini & Alberto Bardelli & Salvatore Siena - 1-9 Cost-Effectiveness of an Intervention to Reduce Emergency Re-Admissions to Hospital among Older Patients
by Nicholas Graves & Mary Courtney & Helen Edwards & Anne Chang & Anthony Parker & Kathleen Finlayson - 1-10 Multivariate Statistical Analyses Demonstrate Unique Host Immune Responses to Single and Dual Lentiviral Infection
by Sunando Roy & Jennie Lavine & Francesca Chiaromonte & Julie Terwee & Sue VandeWoude & Ottar Bjornstad & Mary Poss - 1-10 A Statistical Model of Protein Sequence Similarity and Function Similarity Reveals Overly-Specific Function Predictions
by Brenton Louie & Roger Higdon & Eugene Kolker - 1-10 Lacunarity Analysis: A Promising Method for the Automated Assessment of Melanocytic Naevi and Melanoma
by Stephen Gilmore & Rainer Hofmann-Wellenhof & Jim Muir & H Peter Soyer - 1-10 The Perfect Family: Decision Making in Biparental Care
by Erol Akçay & Joan Roughgarden - 1-10 A Unique, Consistent Identifier for Alternatively Spliced Transcript Variants
by Alberto Riva & Graziano Pesole - 1-10 Cross-Talk between Signaling Pathways Can Generate Robust Oscillations in Calcium and cAMP
by Fernando Siso-Nadal & Jeffrey J Fox & Stéphane A Laporte & Terence E Hébert & Peter S Swain - 1-10 High Resolution MEMS Accelerometers to Estimate VO2 and Compare Running Mechanics between Highly Trained Inter-Collegiate and Untrained Runners
by Stephen J McGregor & Michael A Busa & James A Yaggie & Erik M Bollt - 1-10 Assessment of Metabolome Annotation Quality: A Method for Evaluating the False Discovery Rate of Elemental Composition Searches
by Fumio Matsuda & Yoko Shinbo & Akira Oikawa & Masami Yokota Hirai & Oliver Fiehn & Shigehiko Kanaya & Kazuki Saito - 1-10 Determining Protein Complex Connectivity Using a Probabilistic Deletion Network Derived from Quantitative Proteomics
by Mihaela E Sardiu & Joshua M Gilmore & Michael J Carrozza & Bing Li & Jerry L Workman & Laurence Florens & Michael P Washburn - 1-11 DYRK1A, a Novel Determinant of the Methionine-Homocysteine Cycle in Different Mouse Models Overexpressing this Down-Syndrome-Associated Kinase
by Christophe Noll & Chris Planque & Clémentine Ripoll & Fayçal Guedj & Anna Diez & Véronique Ducros & Nicole Belin & Arnaud Duchon & Jean-Louis Paul & Anne Badel & Bénédicte de Freminville & Yann Grattau & Henri Bléhaut & Yann Herault & Nathalie Janel & Jean-Maurice Delabar - 1-11 Safety and Immunogenicity of the Malaria Vaccine Candidate MSP3 Long Synthetic Peptide in 12–24 Months-Old Burkinabe Children
by Sodiomon B Sirima & Alfred B Tiono & Alphonse Ouédraogo & Amidou Diarra & André Lin Ouédraogo & Jean Baptiste Yaro & Espérance Ouédraogo & Adama Gansané & Edith C Bougouma & Amadou T Konaté & Youssouf Kaboré & Abdoulaye Traoré & Chilengi Roma & Issiaka Soulama & Adrian J F Luty & Simon Cousens & Issa Nébié - 1-11 Balancing with Vibration: A Prelude for “Drift and Act” Balance Control
by John G Milton & Toru Ohira & Juan Luis Cabrera & Ryan M Fraiser & Janelle B Gyorffy & Ferrin K Ruiz & Meredith A Strauss & Elizabeth C Balch & Pedro J Marin & Jeffrey L Alexander - 1-11 The Repertoire of Heterotrimeric G Proteins and RGS Proteins in Ciona intestinalis
by R Prasobh & Narayanan Manoj