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Eutrophication risk assessment using Bayesian calibration of process-based models: Application to a mesotrophic lake

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  • Arhonditsis, George B.
  • Qian, Song S.
  • Stow, Craig A.
  • Lamon, E. Conrad
  • Reckhow, Kenneth H.

Abstract

We introduce the Bayesian calibration of process-based models to address the urgent need for robust modeling tools that can effectively support environmental management. The proposed framework aims to combine the advantageous features of both mechanistic and statistical approaches. Models that are based on mechanistic understanding yet remain within the bounds of data-based parameter estimation can accommodate rigorous and complete error analysis. The incorporation of mechanism improves the confidence in predictions made for a variety of conditions, while the statistical methods provide an empirical basis for parameter estimation and allow for estimates of predictive uncertainty. Our illustration focuses on eutrophication modeling but the proposed methodological framework can be easily transferred to a wide variety of disciplines (e.g., hydrology, ecotoxicology, air pollution). We examine the advantages of the Bayesian calibration using a four state variable (phosphate–detritus–phytoplankton–zooplankton) model and the mesotrophic Lake Washington (Washington State, USA) as a case study. Prior parameter distributions were formed on the basis of literature information, while Markov chain Monte Carlo simulations provided a convenient means for approximating the posterior parameter distributions. The model reproduces the key epilimnetic temporal patterns of the system and provides realistic estimates of predictive uncertainty for water quality variables of environmental interest. Finally, we highlight the benefits of Bayesian parameter estimation, such as the quantification of uncertainty in model predictions, optimization of the sampling design of monitoring programs using value of information concepts from decision theory, alignment with the policy practice of adaptive management, and expression of model outputs as probability distributions, that are perfectly suited for stakeholders and policy makers when making decisions for sustainable environmental management.

Suggested Citation

  • Arhonditsis, George B. & Qian, Song S. & Stow, Craig A. & Lamon, E. Conrad & Reckhow, Kenneth H., 2007. "Eutrophication risk assessment using Bayesian calibration of process-based models: Application to a mesotrophic lake," Ecological Modelling, Elsevier, vol. 208(2), pages 215-229.
  • Handle: RePEc:eee:ecomod:v:208:y:2007:i:2:p:215-229
    DOI: 10.1016/j.ecolmodel.2007.05.020
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    References listed on IDEAS

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    1. Ben D. MacArthur & Richard O. C. Oreffo, 2005. "Bridging the gap," Nature, Nature, vol. 433(7021), pages 19-19, January.
    2. Marc C. Kennedy & Anthony O'Hagan, 2001. "Bayesian calibration of computer models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 63(3), pages 425-464.
    3. Craig P. S & Goldstein M. & Rougier J. C & Seheult A. H, 2001. "Bayesian Forecasting for Complex Systems Using Computer Simulators," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 717-729, June.
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    1. Law, Tony & Zhang, Weitao & Zhao, Jingyang & Arhonditsis, George B., 2009. "Structural changes in lake functioning induced from nutrient loading and climate variability," Ecological Modelling, Elsevier, vol. 220(7), pages 979-997.
    2. Alessio C. Spassiani & Matthew S. Mason & Vincent Y. S. Cheng, 2023. "An Australian convective wind gust climatology using Bayesian hierarchical modelling," Natural Hazards: Journal of the International Society for the Prevention and Mitigation of Natural Hazards, Springer;International Society for the Prevention and Mitigation of Natural Hazards, vol. 118(3), pages 2037-2067, September.
    3. Zhang, Weitao & Kim, Dong-Kyun & Rao, Yerubandi R. & Watson, Sue & Mugalingam, Shan & Labencki, Tanya & Dittrich, Maria & Morley, Andrew & Arhonditsis, George B., 2013. "Can simple phosphorus mass balance models guide management decisions? A case study in the Bay of Quinte, Ontario, Canada," Ecological Modelling, Elsevier, vol. 257(C), pages 66-79.
    4. Lindim, C. & Pinho, J.L. & Vieira, J.M.P., 2011. "Analysis of spatial and temporal patterns in a large reservoir using water quality and hydrodynamic modeling," Ecological Modelling, Elsevier, vol. 222(14), pages 2485-2494.
    5. Yang, Likun & Zhao, Xinhua & Peng, Sen & Li, Xia, 2016. "Water quality assessment analysis by using combination of Bayesian and genetic algorithm approach in an urban lake, China," Ecological Modelling, Elsevier, vol. 339(C), pages 77-88.
    6. Li, Yuzhao & Liu, Yong & Zhao, Lei & Hastings, Alan & Guo, Huaicheng, 2015. "Exploring change of internal nutrients cycling in a shallow lake: A dynamic nutrient driven phytoplankton model," Ecological Modelling, Elsevier, vol. 313(C), pages 137-148.
    7. Katin, Alexey & Giudice, Dario Del & Hall, Nathan S. & Paerl, Hans W. & Obenour, Daniel R., 2021. "Simulating algal dynamics within a Bayesian framework to evaluate controls on estuary productivity," Ecological Modelling, Elsevier, vol. 447(C).
    8. Hosack, Geoffrey R. & Eldridge, Peter M., 2009. "Do microbial processes regulate the stability of a coral atoll's enclosed pelagic ecosystem?," Ecological Modelling, Elsevier, vol. 220(20), pages 2665-2682.
    9. Ramin, Maryam & Labencki, Tanya & Boyd, Duncan & Trolle, Dennis & Arhonditsis, George B., 2012. "A Bayesian synthesis of predictions from different models for setting water quality criteria," Ecological Modelling, Elsevier, vol. 242(C), pages 127-145.
    10. Xu, Yanhong & Peng, Hong & Yang, Yinqun & Zhang, Wanshun & Wang, Shuangling, 2014. "A cumulative eutrophication risk evaluation method based on a bioaccumulation model," Ecological Modelling, Elsevier, vol. 289(C), pages 77-85.
    11. Zhang, Weitao & Arhonditsis, George B., 2009. "A Bayesian hierarchical framework for calibrating aquatic biogeochemical models," Ecological Modelling, Elsevier, vol. 220(18), pages 2142-2161.
    12. McDonald, C.P. & Bennington, V. & Urban, N.R. & McKinley, G.A., 2012. "1-D test-bed calibration of a 3-D Lake Superior biogeochemical model," Ecological Modelling, Elsevier, vol. 225(C), pages 115-126.
    13. Sawyer, Jennifer M. & Arts, Michael T. & Arhonditsis, George & Diamond, Miriam L., 2016. "A general model of polyunsaturated fatty acid (PUFA) uptake, loss and transformation in freshwater fish," Ecological Modelling, Elsevier, vol. 323(C), pages 96-105.
    14. Mata Almonacid, Pablo & Medel, Carolina, 2022. "A structure-preserving model for the dynamics of estuarine ecosystems and its application in western Patagonia fjords," Ecological Modelling, Elsevier, vol. 466(C).
    15. Shimoda, Yuko & Arhonditsis, George B., 2016. "Phytoplankton functional type modelling: Running before we can walk? A critical evaluation of the current state of knowledge," Ecological Modelling, Elsevier, vol. 320(C), pages 29-43.
    16. Ramin, Maryam & Perhar, Gurbir & Shimoda, Yuko & Arhonditsis, George B., 2012. "Examination of the effects of nutrient regeneration mechanisms on plankton dynamics using aquatic biogeochemical modeling," Ecological Modelling, Elsevier, vol. 240(C), pages 139-155.
    17. Hesse, Cornelia & Krysanova, Valentina & Päzolt, Jens & Hattermann, Fred F., 2008. "Eco-hydrological modelling in a highly regulated lowland catchment to find measures for improving water quality," Ecological Modelling, Elsevier, vol. 218(1), pages 135-148.
    18. Kim, Dong-Kyun & Zhang, Weitao & Rao, Yerubandi R. & Watson, Sue & Mugalingam, Shan & Labencki, Tanya & Dittrich, Maria & Morley, Andrew & Arhonditsis, George B., 2013. "Improving the representation of internal nutrient recycling with phosphorus mass balance models: A case study in the Bay of Quinte, Ontario, Canada," Ecological Modelling, Elsevier, vol. 256(C), pages 53-68.
    19. Rigosi, Anna & Rueda, Francisco J., 2012. "Propagation of uncertainty in ecological models of reservoirs: From physical to population dynamic predictions," Ecological Modelling, Elsevier, vol. 247(C), pages 199-209.
    20. Zhang, Weitao & Watson, Sue B. & Rao, Yerubandi R. & Kling, Hedy J., 2013. "A linked hydrodynamic, water quality and algal biomass model for a large, multi-basin lake: A working management tool," Ecological Modelling, Elsevier, vol. 269(C), pages 37-50.

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