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Inverse Modelling, Sensitivity and Monte Carlo Analysis in R Using Package FME

Citations

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Cited by:

  1. Krishna, Shubham & Ulloa, Hugo N. & Kerimoglu, Onur & Minaudo, Camille & Anneville, Orlane & Wüest, Alfred, 2021. "Model-based data analysis of the effect of winter mixing on primary production in a lake under reoligotrophication," Ecological Modelling, Elsevier, vol. 440(C).
  2. Voinson, Marina & Vanden Broecke, Bram & Leirs, Herwig & Sluydts, Vincent, 2025. "Modeling rodent population and pathogen dynamics in agricultural environments: Assessing the impact of control strategies on disease transmission," Ecological Modelling, Elsevier, vol. 507(C).
  3. Meier, Laura & Brauns, Mario & Grimm, Volker & Weitere, Markus & Frank, Karin, 2022. "MASTIFF: A mechanistic model for cross-scale analyses of the functioning of multiple stressed riverine ecosystems," Ecological Modelling, Elsevier, vol. 470(C).
  4. Beck, Marcus W. & Lehrter, John C. & Lowe, Lisa L. & Jarvis, Brandon M., 2017. "Parameter sensitivity and identifiability for a biogeochemical model of hypoxia in the northern Gulf of Mexico," Ecological Modelling, Elsevier, vol. 363(C), pages 17-30.
  5. McCullough, Ian M. & Dugan, Hilary A. & Farrell, Kaitlin J. & Morales-Williams, Ana M. & Ouyang, Zutao & Roberts, Derek & Scordo, Facundo & Bartlett, Sarah L. & Burke, Samantha M. & Doubek, Jonathan P, 2018. "Dynamic modeling of organic carbon fates in lake ecosystems," Ecological Modelling, Elsevier, vol. 386(C), pages 71-82.
  6. Huancheng Dai & Mingke Luo & Xia Jiang & Xixi Li & Peng Zhang & Yong Niu, 2025. "Research on the Characteristics of Heavy Metal Pollution in Lake and Reservoir Sediments in China Based on Meta-Analysis," Sustainability, MDPI, vol. 17(12), pages 1-32, June.
  7. Hussnain Mukhtar & Yu-Pin Lin & Oleg V. Shipin & Joy R. Petway, 2017. "Modeling Nitrogen Dynamics in a Waste Stabilization Pond System Using Flexible Modeling Environment with MCMC," IJERPH, MDPI, vol. 14(7), pages 1-15, July.
  8. Kankoé Sallah & Roch Giorgi & El-Hadj Ba & Martine Piarroux & Renaud Piarroux & Badara Cisse & Jean Gaudart, 2020. "Targeting Malaria Hotspots to Reduce Transmission Incidence in Senegal," IJERPH, MDPI, vol. 18(1), pages 1-17, December.
  9. Jinyoung Yang & Jeffrey S. Rosenthal, 2017. "Automatically tuned general-purpose MCMC via new adaptive diagnostics," Computational Statistics, Springer, vol. 32(1), pages 315-348, March.
  10. Shoya Iwanami & Kosaku Kitagawa & Hirofumi Ohashi & Yusuke Asai & Kaho Shionoya & Wakana Saso & Kazane Nishioka & Hisashi Inaba & Shinji Nakaoka & Takaji Wakita & Odo Diekmann & Shingo Iwami & Koichi , 2020. "Should a viral genome stay in the host cell or leave? A quantitative dynamics study of how hepatitis C virus deals with this dilemma," PLOS Biology, Public Library of Science, vol. 18(7), pages 1-17, July.
  11. Hannah Al Ali & Alireza Daneshkhah & Abdesslam Boutayeb & Zindoga Mukandavire, 2022. "Examining Type 1 Diabetes Mathematical Models Using Experimental Data," IJERPH, MDPI, vol. 19(2), pages 1-20, January.
  12. G. Máthé-Gáspár & N. Fodor, 2012. "Modeling the phosphorus balance of different soilsusing the 4M crop model," Plant, Soil and Environment, Czech Academy of Agricultural Sciences, vol. 58(9), pages 391-398.
  13. Haas, Marcelo B. & Guse, Björn & Pfannerstill, Matthias & Fohrer, Nicola, 2015. "Detection of dominant nitrate processes in ecohydrological modeling with temporal parameter sensitivity analysis," Ecological Modelling, Elsevier, vol. 314(C), pages 62-72.
  14. Taffi, Marianna & Paoletti, Nicola & Liò, Pietro & Pucciarelli, Sandra & Marini, Mauro, 2015. "Bioaccumulation modelling and sensitivity analysis for discovering key players in contaminated food webs: The case study of PCBs in the Adriatic Sea," Ecological Modelling, Elsevier, vol. 306(C), pages 205-215.
  15. Sehjeong Kim & Abdessamad Tridane, 2017. "Thalassemia in the United Arab Emirates: Why it can be prevented but not eradicated," PLOS ONE, Public Library of Science, vol. 12(1), pages 1-13, January.
  16. Boulange, Julien & Nizamov, Sherzod & Nurbekov, Aziz & Ziyatov, Musulmon & Kamilov, Bakhtiyor & Nizamov, Sirojiddin & Abduvasikov, Abduaziz & Khamdamova, Gulnoza & Watanabe, Hirozumi, 2025. "Calibration and validation of the AquaCrop model for simulating cotton growth under a semi-arid climate in Uzbekistan," Agricultural Water Management, Elsevier, vol. 310(C).
  17. repec:jss:jstsof:33:i09 is not listed on IDEAS
  18. Zhou, Wei & O'Neill, Eoghan & Moncaster, Alice & Reiner, David M. & Guthrie, Peter, 2020. "Forecasting urban residential stock turnover dynamics using system dynamics and Bayesian model averaging," Applied Energy, Elsevier, vol. 275(C).
  19. Krishna, Shubham & Pahlow, Markus & Schartau, Markus, 2019. "Comparison of two carbon-nitrogen regulatory models calibrated with mesocosm data," Ecological Modelling, Elsevier, vol. 411(C).
  20. Hanson, Paul C. & Stillman, Aviah B. & Jia, Xiaowei & Karpatne, Anuj & Dugan, Hilary A. & Carey, Cayelan C. & Stachelek, Joseph & Ward, Nicole K. & Zhang, Yu & Read, Jordan S. & Kumar, Vipin, 2020. "Predicting lake surface water phosphorus dynamics using process-guided machine learning," Ecological Modelling, Elsevier, vol. 430(C).
  21. Tom Shatwell & Jan Köhler & Andreas Nicklisch, 2014. "Temperature and Photoperiod Interactions with Phosphorus-Limited Growth and Competition of Two Diatoms," PLOS ONE, Public Library of Science, vol. 9(7), pages 1-15, July.
  22. Van Frausum, Johan & Middelburg, Jack J. & Soetaert, Karline & Meysman, Filip J.R., 2010. "Different proxies for the reactivity of aquatic sediments towards oxygen: A model assessment," Ecological Modelling, Elsevier, vol. 221(17), pages 2054-2067.
  23. Lucash, Melissa S. & Marshall, Adrienne M. & Weiss, Shelby A. & McNabb, John W. & Nicolsky, Dmitry J. & Flerchinger, Gerald N. & Link, Timothy E. & Vogel, Jason G. & Scheller, Robert M. & Abramoff, Ro, 2023. "Burning trees in frozen soil: Simulating fire, vegetation, soil, and hydrology in the boreal forests of Alaska," Ecological Modelling, Elsevier, vol. 481(C).
  24. Raquel Martins Lana & Maíra Moreira Morais & Tiago França Melo de Lima & Tiago Garcia de Senna Carneiro & Lucas Martins Stolerman & Jefferson Pereira Caldas dos Santos & José Joaquín Carvajal Cortés &, 2018. "Assessment of a trap based Aedes aegypti surveillance program using mathematical modeling," PLOS ONE, Public Library of Science, vol. 13(1), pages 1-16, January.
  25. Littfinski, Tobias & Stricker, Max & Nettmann, Edith & Gehring, Tito & Hiegemann, Heinz & Krimmler, Stefan & Lübken, Manfred & Pant, Deepak & Wichern, Marc, 2022. "A generalized whole-cell model for wastewater-fed microbial fuel cells," Applied Energy, Elsevier, vol. 321(C).
  26. Chengyao Jiang & Ke Xu & Jiahui Rao & Jiaming Liu & Yushan Li & Yu Song & Mengyao Li & Yangxia Zheng & Wei Lu, 2024. "Establishment and Solution of a Finite Element Gas Exchange Model in Greenhouse-Grown Tomatoes for Two-Dimensional Porous Media with Light Quantity and Light Direction," Agriculture, MDPI, vol. 14(8), pages 1-19, July.
  27. Venolia, Celeste T. & Lavaud, Romain & Green-Gavrielidis, Lindsay A. & Thornber, Carol & Humphries, Austin T., 2020. "Modeling the Growth of Sugar Kelp (Saccharina latissima) in Aquaculture Systems using Dynamic Energy Budget Theory," Ecological Modelling, Elsevier, vol. 430(C).
  28. Elisa Fesce & Claudia Romeo & Eleonora Chinchio & Nicola Ferrari, 2020. "How to choose the best control strategy? Mathematical models as a tool for pre-intervention evaluation on a macroparasitic disease," PLOS Neglected Tropical Diseases, Public Library of Science, vol. 14(10), pages 1-17, October.
  29. Lee, Kyoungjae & Lee, Jaeyong & Dass, Sarat C., 2018. "Inference for differential equation models using relaxation via dynamical systems," Computational Statistics & Data Analysis, Elsevier, vol. 127(C), pages 116-134.
  30. Wei Zhou & Eoghan O'Neill & Alice Moncaster & David M Reiner & Peter Guthrie, 2019. "Applying Bayesian Model Averaging to Characterise Urban Residential Stock Turnover Dynamics," Working Papers EPRG1933, Energy Policy Research Group, Cambridge Judge Business School, University of Cambridge.
  31. Zindoga Mukandavire & Farai Nyabadza & Noble J Malunguza & Diego F Cuadros & Tinevimbo Shiri & Godfrey Musuka, 2020. "Quantifying early COVID-19 outbreak transmission in South Africa and exploring vaccine efficacy scenarios," PLOS ONE, Public Library of Science, vol. 15(7), pages 1-11, July.
  32. Husson, Bérengère & Sarrazin, Jozée & van Oevelen, Dick & Sarradin, Pierre-Marie & Soetaert, Karline & Menesguen, Alain, 2018. "Modelling the interactions of the hydrothermal mussel Bathymodiolus azoricus with vent fluid," Ecological Modelling, Elsevier, vol. 377(C), pages 35-50.
  33. Keane, Robert E. & McKenzie, Donald & Falk, Donald A. & Smithwick, Erica A.H. & Miller, Carol & Kellogg, Lara-Karena B., 2015. "Representing climate, disturbance, and vegetation interactions in landscape models," Ecological Modelling, Elsevier, vol. 309, pages 33-47.
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