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Evaluating the Adequacy of Gravity Models as a Description of Human Mobility for Epidemic Modelling

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  • James Truscott
  • Neil M Ferguson

Abstract

Gravity models have a long history of use in describing and forecasting the movements of people as well as goods and services, making them a natural basis for disease transmission rates over distance. In agent-based micro-simulations, gravity models can be directly used to represent movement of individuals and hence disease. In this paper, we consider a range of gravity models as fits to movement data from the UK and the US. We examine the ability of synthetic networks generated from fitted models to match those from the data in terms of epidemic behaviour; in particular, times to first infection. For both datasets, best fits are obtained with a two-piece ‘matched’ power law distance distribution. Epidemics on synthetic UK networks match well those on data networks across all but the smallest nodes for a range of aggregation levels. We derive an expression for time to infection between nodes in terms of epidemiological and network parameters which illuminates the influence of network clustering in spread across networks and suggests an approximate relationship between the log-likelihood deviance of model fit and the match times to infection between synthetic and data networks. On synthetic US networks, the match in epidemic behaviour is initially poor and sensitive to the initially infected node. Analysis of times to infection indicates a failure of models to capture infrequent long-range contact between large nodes. An assortative model based on node population size captures this heterogeneity, considerably improving the epidemiological match between synthetic and data networks. Author Summary: An accurate representation of disease transmission between spatially-distinct regions is an essential part of modelling epidemic behaviour on a national or international scale. Gravity models, which describe movement fluxes between regions in terms of their populations and distance from each other, have a history of successful use in the geography and economics and are increasingly used in epidemiology. We look at the ability of a range of gravity models to fit human movement data from the UK and the US. In particular, we compare the behaviour of a simple flu-like epidemic model on synthetic networks generated by fitted gravity models and on the original network present in the data, using time to first infection. For UK data, epidemic behaviour on synthetic networks matches that on the original data quite closely. For US movement data, synthetic networks perform much worse. We develop an analytic expression for infection time between two regions which indicates that our gravity models fail to capture long range connections between large populations. A model with assortative mixing based on population size greatly improves the match between synthetic and data networks.

Suggested Citation

  • James Truscott & Neil M Ferguson, 2012. "Evaluating the Adequacy of Gravity Models as a Description of Human Mobility for Epidemic Modelling," PLOS Computational Biology, Public Library of Science, vol. 8(10), pages 1-12, October.
  • Handle: RePEc:plo:pcbi00:1002699
    DOI: 10.1371/journal.pcbi.1002699
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    References listed on IDEAS

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    1. John Stillwell & Oliver Duke‐Williams, 2007. "Understanding the 2001 UK census migration and commuting data: the effect of small cell adjustment and problems of comparison with 1991," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 170(2), pages 425-445, March.
    2. Tini Garske & Hongjie Yu & Zhibin Peng & Min Ye & Hang Zhou & Xiaowen Cheng & Jiabing Wu & Neil Ferguson, 2011. "Travel Patterns in China," PLOS ONE, Public Library of Science, vol. 6(2), pages 1-9, February.
    3. Neil M. Ferguson & Derek A. T. Cummings & Christophe Fraser & James C. Cajka & Philip C. Cooley & Donald S. Burke, 2006. "Strategies for mitigating an influenza pandemic," Nature, Nature, vol. 442(7101), pages 448-452, July.
    4. Filippo Simini & Marta C. González & Amos Maritan & Albert-László Barabási, 2012. "A universal model for mobility and migration patterns," Nature, Nature, vol. 484(7392), pages 96-100, April.
    5. Neil M. Ferguson & Derek A.T. Cummings & Simon Cauchemez & Christophe Fraser & Steven Riley & Aronrag Meeyai & Sopon Iamsirithaworn & Donald S. Burke, 2005. "Strategies for containing an emerging influenza pandemic in Southeast Asia," Nature, Nature, vol. 437(7056), pages 209-214, September.
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    Cited by:

    1. Constanze Ciavarella & Neil M Ferguson, 2021. "Deriving fine-scale models of human mobility from aggregated origin-destination flow data," PLOS Computational Biology, Public Library of Science, vol. 17(2), pages 1-18, February.
    2. Dasgupta,Susmita & Wheeler,David R., 2020. "Modeling and Predicting the Spread of Covid-19: Comparative Results for the United States, thePhilippines, and South Africa," Policy Research Working Paper Series 9419, The World Bank.
    3. Victoria Romeo-Aznar & Laís Picinini Freitas & Oswaldo Gonçalves Cruz & Aaron A. King & Mercedes Pascual, 2022. "Fine-scale heterogeneity in population density predicts wave dynamics in dengue epidemics," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
    4. Desbordes, Rodolphe, 2021. "Spatial dynamics of major infectious diseases outbreaks: A global empirical assessment," Journal of Mathematical Economics, Elsevier, vol. 93(C).
    5. Chao Zhang & Si Chen & Chunyang Wang & Yi Zhao & Min Ao, 2022. "Population Flow and Epidemic Spread: Direct Impact and Spatial Spillover Effect," SAGE Open, , vol. 12(1), pages 21582440211, January.
    6. Fangzhou Li & Zhiming Feng & Peng Li & Zhen You, 2017. "Measuring directional urban spatial interaction in China: A migration perspective," PLOS ONE, Public Library of Science, vol. 12(1), pages 1-19, January.

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