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Parametric bootstrap methods for bias correction in linear mixed models

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  • Kubokawa, Tatsuya
  • Nagashima, Bui

Abstract

The empirical best linear unbiased predictor (EBLUP) in the linear mixed model (LMM) is useful for the small area estimation, and the estimation of the mean squared error (MSE) of EBLUP is important as a measure of uncertainty of EBLUP. To obtain a second-order unbiased estimator of the MSE, the second-order bias correction has been derived based on Taylor series expansions. However, this approach is hard to implement in complicated models with many unknown parameters like variance components, since we need to compute asymptotic bias, variance and covariance for estimators of unknown parameters as well as partial derivatives of some quantities. A similar difficulty occurs in the construction of confidence intervals based on EBLUP with second-order correction and in the derivation of second-order bias correction in the Akaike Information Criterion (AIC) and the conditional AIC. To avoid such difficulty in the derivation of second-order bias correction in these problems, the parametric bootstrap methods are suggested in this paper, and their second-order justifications are established. Finally, performances of the suggested procedures are numerically investigated in comparison with some existing procedures given in the literature.

Suggested Citation

  • Kubokawa, Tatsuya & Nagashima, Bui, 2012. "Parametric bootstrap methods for bias correction in linear mixed models," Journal of Multivariate Analysis, Elsevier, vol. 106(C), pages 1-16.
  • Handle: RePEc:eee:jmvana:v:106:y:2012:i:c:p:1-16
    DOI: 10.1016/j.jmva.2011.12.002
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    References listed on IDEAS

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    1. Gauri Sankar Datta & J. N. K. Rao & David Daniel Smith, 2005. "On measuring the variability of small area estimators under a basic area level model," Biometrika, Biometrika Trust, vol. 92(1), pages 183-196, March.
    2. Gauri Sankar Datta & Malay Ghosh & David Daniel Smith & Parthasarathi Lahiri, 2002. "On an Asymptotic Theory of Conditional and Unconditional Coverage Probabilities of Empirical Bayes Confidence Intervals," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 29(1), pages 139-152, March.
    3. Gauri Datta & Tatsuya Kubokawa & Isabel Molina & J. Rao, 2011. "Estimation of mean squared error of model-based small area estimators," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 20(2), pages 367-388, August.
    4. Hua Liang & Hulin Wu & Guohua Zou, 2008. "A note on conditional aic for linear mixed-effects models," Biometrika, Biometrika Trust, vol. 95(3), pages 773-778.
    5. Peter Hall & Tapabrata Maiti, 2006. "On parametric bootstrap methods for small area prediction," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(2), pages 221-238, April.
    6. Tatsuya Kubokawa, 2010. "On Measuring Uncertainty of Small Area Estimators with Higher Order Accuracy," CIRJE F-Series CIRJE-F-754, CIRJE, Faculty of Economics, University of Tokyo.
    7. Doornik, Jurgen A. & Ooms, Marius, 2003. "Computational aspects of maximum likelihood estimation of autoregressive fractionally integrated moving average models," Computational Statistics & Data Analysis, Elsevier, vol. 42(3), pages 333-348, March.
    8. Basu, Ruma & Ghosh, J. K. & Mukerjee, Rahul, 2003. "Empirical Bayes prediction intervals in a normal regression model: higher order asymptotics," Statistics & Probability Letters, Elsevier, vol. 63(2), pages 197-203, June.
    9. Florin Vaida & Suzette Blanchard, 2005. "Conditional Akaike information for mixed-effects models," Biometrika, Biometrika Trust, vol. 92(2), pages 351-370, June.
    10. Kubokawa, Tatsuya, 2011. "Conditional and unconditional methods for selecting variables in linear mixed models," Journal of Multivariate Analysis, Elsevier, vol. 102(3), pages 641-660, March.
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    Cited by:

    1. Yuki Kawakubo & Shonosuke Sugasawa & Tatsuya Kubokawa, 2014. "Conditional AIC under Covariate Shift with Application to Small Area Prediction," CIRJE F-Series CIRJE-F-944, CIRJE, Faculty of Economics, University of Tokyo.
    2. Kawakubo, Yuki & Kubokawa, Tatsuya, 2014. "Modified conditional AIC in linear mixed models," Journal of Multivariate Analysis, Elsevier, vol. 129(C), pages 44-56.
    3. Tatsuya Kubokawa, 2012. "Mixed Effects Prediction under Benchmarking and Applications to Small Area Estimation," CIRJE F-Series CIRJE-F-832, CIRJE, Faculty of Economics, University of Tokyo.
    4. Flores-Agreda, Daniel & Cantoni, Eva, 2019. "Bootstrap estimation of uncertainty in prediction for generalized linear mixed models," Computational Statistics & Data Analysis, Elsevier, vol. 130(C), pages 1-17.
    5. Yuki Kawakubo & Tatsuya Kubokawa, 2013. "Modfiied Conditional AIC in Linear Mixed Models," CIRJE F-Series CIRJE-F-895, CIRJE, Faculty of Economics, University of Tokyo.

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