IDEAS home Printed from https://ideas.repec.org/a/eee/ecomod/v221y2010i16p1880-1888.html
   My bibliography  Save this article

Uncertainty analyses for calibrating a soil carbon balance model to agricultural field trial data in Sweden and Kenya

Author

Listed:
  • Juston, John
  • Andrén, Olof
  • Kätterer, Thomas
  • Jansson, Per-Erik

Abstract

How do additional data of the same and/or different type contribute to reducing model parameter and predictive uncertainties? Most modeling applications of soil organic carbon (SOC) time series in agricultural field trial datasets have been conducted without accounting for model parameter uncertainty. There have been recent advances with Monte Carlo-based uncertainty analyses in the field of hydrological modeling that are applicable, relevant and potentially valuable in modeling the dynamics of SOC. Here we employed a Monte Carlo method with threshold screening known as Generalized Likelihood Uncertainty Estimation (GLUE) to calibrate the Introductory Carbon Balance Model (ICBM) to long-term field trail data from Ultuna, Sweden and Machang’a, Kenya. Calibration results are presented in terms of parameter distributions and credibility bands on time series simulations for a number of case studies. Using these methods, we demonstrate that widely uncertain model parameters, as well as strong covariance between inert pool size and rate constant parameters, exist when root mean square simulation errors were within uncertainties in input estimations and data observations. We show that even rough estimates of the inert pool (perhaps from chemical analysis) can be quite valuable to reduce uncertainties in model parameters. In fact, such estimates were more effective at reducing parameter and predictive uncertainty than an additional 16 years time series data at Ultuna. We also demonstrate an effective method to jointly, simultaneously and in principle more robustly calibrate model parameters to multiple datasets across different climatic regions within an uncertainty framework. These methods and approaches should have benefits for use with other SOC models and datasets as well.

Suggested Citation

  • Juston, John & Andrén, Olof & Kätterer, Thomas & Jansson, Per-Erik, 2010. "Uncertainty analyses for calibrating a soil carbon balance model to agricultural field trial data in Sweden and Kenya," Ecological Modelling, Elsevier, vol. 221(16), pages 1880-1888.
  • Handle: RePEc:eee:ecomod:v:221:y:2010:i:16:p:1880-1888
    DOI: 10.1016/j.ecolmodel.2010.04.019
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0304380010002358
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ecolmodel.2010.04.019?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Xenakis, Georgios & Ray, Duncan & Mencuccini, Maurizio, 2008. "Sensitivity and uncertainty analysis from a coupled 3-PG and soil organic matter decomposition model," Ecological Modelling, Elsevier, vol. 219(1), pages 1-16.
    2. Ben D. MacArthur & Richard O. C. Oreffo, 2005. "Bridging the gap," Nature, Nature, vol. 433(7021), pages 19-19, January.
    3. Svensson, Magnus & Jansson, Per-Erik & Gustafsson, David & Kleja, Dan Berggren & Langvall, Ola & Lindroth, Anders, 2008. "Bayesian calibration of a model describing carbon, water and heat fluxes for a Swedish boreal forest stand," Ecological Modelling, Elsevier, vol. 213(3), pages 331-344.
    4. Unknown, 2004. "Modelling Nutrient Management in Tropical Cropping Systems," ACIAR Proceedings Series 135389, Australian Centre for International Agricultural Research.
    5. Bationo, Andre & Kihara, Job & Vanlauwe, Bernard & Waswa, Boaz & Kimetu, Joseph, 2007. "Soil organic carbon dynamics, functions and management in West African agro-ecosystems," Agricultural Systems, Elsevier, vol. 94(1), pages 13-25, April.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Ortiz, Carina A. & Liski, Jari & Gärdenäs, Annemieke I. & Lehtonen, Aleksi & Lundblad, Mattias & Stendahl, Johan & Ågren, Göran I. & Karltun, Erik, 2013. "Soil organic carbon stock changes in Swedish forest soils—A comparison of uncertainties and their sources through a national inventory and two simulation models," Ecological Modelling, Elsevier, vol. 251(C), pages 221-231.
    2. Fortin, J.G. & Bolinder, M.A. & Anctil, F. & Kätterer, T. & Andrén, O. & Parent, L.E., 2011. "Effects of climatic data low-pass filtering on the ICBM temperature- and moisture-based soil biological activity factors in a cool and humid climate," Ecological Modelling, Elsevier, vol. 222(17), pages 3050-3060.
    3. Ortiz, Carina & Karltun, Erik & Stendahl, Johan & Gärdenäs, Annemieke I. & Ågren, Göran I., 2011. "Modelling soil carbon development in Swedish coniferous forest soils—An uncertainty analysis of parameters and model estimates using the GLUE method," Ecological Modelling, Elsevier, vol. 222(17), pages 3020-3032.
    4. Shafiei, Mojtaba & Ghahraman, Bijan & Saghafian, Bahram & Davary, Kamran & Pande, Saket & Vazifedoust, Majid, 2014. "Uncertainty assessment of the agro-hydrological SWAP model application at field scale: A case study in a dry region," Agricultural Water Management, Elsevier, vol. 146(C), pages 324-334.
    5. M. Bolinder & J. Fortin & F. Anctil & O. Andrén & T. Kätterer & R. Jong & L. Parent, 2013. "Spatial and temporal variability of soil biological activity in the Province of Québec, Canada (45–58 °N, 1960–2009)—calculations based on climate records," Climatic Change, Springer, vol. 117(4), pages 739-755, April.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Bagnara, Maurizio & Van Oijen, Marcel & Cameron, David & Gianelle, Damiano & Magnani, Federico & Sottocornola, Matteo, 2018. "Bayesian calibration of simple forest models with multiplicative mathematical structure: A case study with two Light Use Efficiency models in an alpine forest," Ecological Modelling, Elsevier, vol. 371(C), pages 90-100.
    2. Xenakis, Georgios & Ray, Duncan & Mencuccini, Maurizio, 2008. "Sensitivity and uncertainty analysis from a coupled 3-PG and soil organic matter decomposition model," Ecological Modelling, Elsevier, vol. 219(1), pages 1-16.
    3. Wu, Si Hong & Jansson, Per-Erik & Kolari, Pasi, 2011. "Modeling seasonal course of carbon fluxes and evapotranspiration in response to low temperature and moisture in a boreal Scots pine ecosystem," Ecological Modelling, Elsevier, vol. 222(17), pages 3103-3119.
    4. Bagnara, Maurizio & Sottocornola, Matteo & Cescatti, Alessandro & Minerbi, Stefano & Montagnani, Leonardo & Gianelle, Damiano & Magnani, Federico, 2015. "Bayesian optimization of a light use efficiency model for the estimation of daily gross primary productivity in a range of Italian forest ecosystems," Ecological Modelling, Elsevier, vol. 306(C), pages 57-66.
    5. Chen, Dianyu & Wang, Xing & Liu, Shouyang & Wang, Youke & Gao, Zhiyong & Zhang, Linlin & Wei, Xinguang & Wei, Xindong, 2015. "Using Bayesian analysis to compare the performance of three evapotranspiration models for rainfed jujube (Ziziphus jujuba Mill.) plantations in the Loess Plateau," Agricultural Water Management, Elsevier, vol. 159(C), pages 341-357.
    6. Yousefpour, Rasoul & You, Bin & Hanewinkel, Marc, 2019. "Simulation of extreme storm effects on regional forest soil carbon stock," Ecological Modelling, Elsevier, vol. 399(C), pages 39-53.
    7. Chen, Dianyu & Hsu, Kuolin & Duan, Xingwu & Wang, Youke & Wei, Xinguang & Muhammad, Saifullah, 2020. "Bayesian analysis of jujube canopy transpiration models: Does embedding the key environmental factor in Jarvis canopy resistance sub-model always associate with improving transpiration modeling?," Agricultural Water Management, Elsevier, vol. 234(C).
    8. Vanessa Taylor & Sarah Ashelford & Patricia Fell & Penelope J Goacher, 2015. "Biosciences in nurse education: is the curriculum fit for practice? Lecturers' views and recommendations from across the UK," Journal of Clinical Nursing, John Wiley & Sons, vol. 24(19-20), pages 2797-2806, October.
    9. Booth, Heather, 2006. "Demographic forecasting: 1980 to 2005 in review," International Journal of Forecasting, Elsevier, vol. 22(3), pages 547-581.
    10. Ercan Tomakin, 2014. "Teaching English Tenses (grammar) in the Turkish Texts; A Case of Simple Present Tense: Is?l Maketi Iter," International Journal of Learning and Development, Macrothink Institute, vol. 4(1), pages 115-131, March.
    11. Peter Viggo Jakobsen, 2009. "Small States, Big Influence: The Overlooked Nordic Influence on the Civilian ESDP," Journal of Common Market Studies, Wiley Blackwell, vol. 47(1), pages 81-102, January.
    12. Radha Jagannathan & Michael J. Camasso & Bagavan Das & Jale Tosun & Sadagopan Iyengar, 2017. "Family, society and the individual: determinants of entrepreneurial attitudes among youth in Chennai, South India," Journal of Global Entrepreneurship Research, Springer;UNESCO Chair in Entrepreneurship, vol. 7(1), pages 1-22, December.
    13. Tautenhahn, Susanne & Heilmeier, Hermann & Jung, Martin & Kahl, Anja & Kattge, Jens & Moffat, Antje & Wirth, Christian, 2012. "Beyond distance-invariant survival in inverse recruitment modeling: A case study in Siberian Pinus sylvestris forests," Ecological Modelling, Elsevier, vol. 233(C), pages 90-103.
    14. Sheahan, Megan & Black, Roy & Jayne, T.S., 2013. "Are Kenyan farmers under-utilizing fertilizer? Implications for input intensification strategies and research," Food Policy, Elsevier, vol. 41(C), pages 39-52.
    15. Vincenzo Galasso, 2020. "Market Reactions to Quest for Decentralization and Independence: Evidence from Catalonia," CESifo Working Paper Series 8254, CESifo.
    16. Thijs Fassaert & Matty A.S. De Wit & Wilco C. Tuinebreijer & Jeroen W. Knipscheer & Arnoud P. Verhoeff & Aartjan T.F. Beekman & Jack Dekker, 2011. "Acculturation and Psychological Distress Among Non-Western Muslim Migrants - a Population-Based Survey," International Journal of Social Psychiatry, , vol. 57(2), pages 132-143, March.
    17. Jakub Bijak & Jason D. Hilton & Eric Silverman & Viet Dung Cao, 2013. "Reforging the Wedding Ring," Demographic Research, Max Planck Institute for Demographic Research, Rostock, Germany, vol. 29(27), pages 729-766.
    18. Philippe De Donder & Michel Le Breton & Eugenio Peluso, 2012. "Majority Voting in Multidimensional Policy Spaces: Kramer–Shepsle versus Stackelberg," Journal of Public Economic Theory, Association for Public Economic Theory, vol. 14(6), pages 879-909, December.
    19. Sheahan, Megan & Black, Roy & Jayne, Thomas S., 2012. "Are Farmers Under-Utilizing Fertilizer? Evidence from Kenya," 2012 Conference, August 18-24, 2012, Foz do Iguacu, Brazil 126739, International Association of Agricultural Economists.
    20. Grace Kite, 2014. "Linked in? Software and Information Technology Services in India’s Economic Development," Journal of South Asian Development, , vol. 9(2), pages 99-119, August.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:ecomod:v:221:y:2010:i:16:p:1880-1888. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/ecological-modelling .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.