IDEAS home Printed from https://ideas.repec.org/a/spr/jagbes/v22y2017i4d10.1007_s13253-017-0300-y.html
   My bibliography  Save this article

Assessing the Impacts of Time-to-Detection Distribution Assumptions on Detection Probability Estimation

Author

Listed:
  • Adam Martin-Schwarze

    (Iowa State University)

  • Jarad Niemi

    (Iowa State University)

  • Philip Dixon

    (Iowa State University)

Abstract

Abundance estimates from animal point-count surveys require accurate estimates of detection probabilities. The standard model for estimating detection from removal-sampled point-count surveys assumes that organisms at a survey site are detected at a constant rate; however, this assumption can often lead to biased estimates. We consider a class of N-mixture models that allows for detection heterogeneity over time through a flexibly defined time-to-detection distribution (TTDD) and allows for fixed and random effects for both abundance and detection. Our model is thus a combination of survival time-to-event analysis with unknown-N, unknown-p abundance estimation. We specifically explore two-parameter families of TTDDs, e.g., gamma, that can additionally include a mixture component to model increased probability of detection in the initial observation period. Based on simulation analyses, we find that modeling a TTDD by using a two-parameter family is necessary when data have a chance of arising from a distribution of this nature. In addition, models with a mixture component can outperform non-mixture models even when the truth is non-mixture. Finally, we analyze an Ovenbird data set from the Chippewa National Forest using mixed effect models for both abundance and detection. We demonstrate that the effects of explanatory variables on abundance and detection are consistent across mixture TTDDs but that flexible TTDDs result in lower estimated probabilities of detection and therefore higher estimates of abundance. Supplementary materials accompanying this paper appear on-line.

Suggested Citation

  • Adam Martin-Schwarze & Jarad Niemi & Philip Dixon, 2017. "Assessing the Impacts of Time-to-Detection Distribution Assumptions on Detection Probability Estimation," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 22(4), pages 465-480, December.
  • Handle: RePEc:spr:jagbes:v:22:y:2017:i:4:d:10.1007_s13253-017-0300-y
    DOI: 10.1007/s13253-017-0300-y
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s13253-017-0300-y
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s13253-017-0300-y?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Brent A. Coull & Alan Agresti, 1999. "The Use of Mixed Logit Models to Reflect Heterogeneity in Capture-Recapture Studies," Biometrics, The International Biometric Society, vol. 55(1), pages 294-301, March.
    2. John Geweke, 1991. "Evaluating the accuracy of sampling-based approaches to the calculation of posterior moments," Staff Report 148, Federal Reserve Bank of Minneapolis.
    3. J. Andrew Royle, 2004. "N-Mixture Models for Estimating Population Size from Spatially Replicated Counts," Biometrics, The International Biometric Society, vol. 60(1), pages 108-115, March.
    4. Angela Noufaily & M. Jones, 2013. "On maximization of the likelihood for the generalized gamma distribution," Computational Statistics, Springer, vol. 28(2), pages 505-517, April.
    5. Robert M. Dorazio & Howard L. Jelks & Frank Jordan, 2005. "Improving Removal-Based Estimates of Abundance by Sampling a Population of Spatially Distinct Subpopulations," Biometrics, The International Biometric Society, vol. 61(4), pages 1093-1101, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Adam Martin-Schwarze & Jarad Niemi & Philip Dixon, 2021. "Joint Modeling of Distances and Times in Point-Count Surveys," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 26(2), pages 289-305, June.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Yuzi Zhang & Howard H. Chang & Qu Cheng & Philip A. Collender & Ting Li & Jinge He & Justin V. Remais, 2023. "A hierarchical model for analyzing multisite individual‐level disease surveillance data from multiple systems," Biometrics, The International Biometric Society, vol. 79(2), pages 1507-1519, June.
    2. Buddhavarapu, Prasad & Bansal, Prateek & Prozzi, Jorge A., 2021. "A new spatial count data model with time-varying parameters," Transportation Research Part B: Methodological, Elsevier, vol. 150(C), pages 566-586.
    3. Jesús Fernández-Villaverde & Juan F. Rubio-Ramirez, 2001. "Comparing dynamic equilibrium economies to data," FRB Atlanta Working Paper 2001-23, Federal Reserve Bank of Atlanta.
    4. Atahan Afsar; José Elías Gallegos; Richard Jaimes; Edgar Silgado Gómez & José Elías Gallegos & Richard Jaimes & Edgar Silgado Gómez, 2020. "Reconciling Empirics and Theory: The Behavioral Hybrid New Keynesian Model," Vniversitas Económica 18560, Universidad Javeriana - Bogotá.
    5. Bai, Yizhou & Xue, Cheng, 2021. "An empirical study on the regulated Chinese agricultural commodity futures market based on skew Ornstein-Uhlenbeck model," Research in International Business and Finance, Elsevier, vol. 57(C).
    6. Mevin B. Hooten & Michael R. Schwob & Devin S. Johnson & Jacob S. Ivan, 2023. "Multistage hierarchical capture–recapture models," Environmetrics, John Wiley & Sons, Ltd., vol. 34(6), September.
    7. Pedro L Ramos & Diego C Nascimento & Paulo H Ferreira & Karina T Weber & Taiza E G Santos & Francisco Louzada, 2019. "Modeling traumatic brain injury lifetime data: Improved estimators for the Generalized Gamma distribution under small samples," PLOS ONE, Public Library of Science, vol. 14(8), pages 1-22, August.
    8. Aßmann, Christian & Boysen-Hogrefe, Jens & Pape, Markus, 2012. "The directional identification problem in Bayesian factor analysis: An ex-post approach," Kiel Working Papers 1799, Kiel Institute for the World Economy (IfW Kiel).
    9. Brent A. Coull & Alan Agresti, 2000. "Random Effects Modeling of Multiple Binomial Responses Using the Multivariate Binomial Logit-Normal Distribution," Biometrics, The International Biometric Society, vol. 56(1), pages 73-80, March.
    10. Ben C. Stevenson & Rachel M. Fewster & Koustubh Sharma, 2022. "Spatial correlation structures for detections of individuals in spatial capture–recapture models," Biometrics, The International Biometric Society, vol. 78(3), pages 963-973, September.
    11. Michael T. Owyang, 2002. "Modeling Volcker as a non-absorbing state: agnostic identification of a Markov-switching VAR," Working Papers 2002-018, Federal Reserve Bank of St. Louis.
    12. André Pereira & Bernardo Andrade, 2015. "On the genetic algorithm with adaptive mutation rate and selected statistical applications," Computational Statistics, Springer, vol. 30(1), pages 131-150, March.
    13. Francesco Bartolucci & Antonio Forcina, 2001. "Analysis of Capture-Recapture Data with a Rasch-Type Model Allowing for Conditional Dependence and Multidimensionality," Biometrics, The International Biometric Society, vol. 57(3), pages 714-719, September.
    14. Feng Dai & Baumgartner Richard & Svetnik Vladimir, 2018. "A Bayesian Framework for Estimating the Concordance Correlation Coefficient Using Skew-elliptical Distributions," The International Journal of Biostatistics, De Gruyter, vol. 14(1), pages 1-8, May.
    15. Keane, Michael & Stavrunova, Olena, 2016. "Adverse selection, moral hazard and the demand for Medigap insurance," Journal of Econometrics, Elsevier, vol. 190(1), pages 62-78.
    16. He, Yongda & Lin, Boqiang, 2018. "Time-varying effects of cyclical fluctuations in China's energy industry on the macro economy and carbon emissions," Energy, Elsevier, vol. 155(C), pages 1102-1112.
    17. Steen, Valerie A. & Duarte, Adam & Peterson, James T., 2023. "An evaluation of multistate occupancy models for estimating relative abundance and population trends," Ecological Modelling, Elsevier, vol. 478(C).
    18. Brand, Claus & Goy, Gavin W & Lemke, Wolfgang, 2020. "Natural rate chimera and bond pricing reality," VfS Annual Conference 2020 (Virtual Conference): Gender Economics 224546, Verein für Socialpolitik / German Economic Association.
    19. González-Astudillo, Manuel, 2019. "An output gap measure for the euro area: Exploiting country-level and cross-sectional data heterogeneity," European Economic Review, Elsevier, vol. 120(C).
    20. Mevin B. Hooten & Christopher K. Wikle & Robert M. Dorazio & J. Andrew Royle, 2007. "Hierarchical Spatiotemporal Matrix Models for Characterizing Invasions," Biometrics, The International Biometric Society, vol. 63(2), pages 558-567, June.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:jagbes:v:22:y:2017:i:4:d:10.1007_s13253-017-0300-y. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.