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On empirical Bayes penalized quasi-likelihood inference in GLMMs and in Bayesian disease mapping and ecological modeling

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  • MacNab, Ying C.
  • Lin, Yi

Abstract

Penalized quasi-likelihood(PQL) procedure for statistical inference in generalized linear mixed models (GLMMs) and in Bayesian disease mapping and ecological modeling are revisited. In GLMM framework, empirical Bayes PQL (EBPQL) procedure is discussed in the context of approximating posterior point and interval prediction of random effects. An in-depth Monte Carlo assessment on EBPQL point and interval estimation of random effects, fixed effects, and prior parameters in univariate and bivariate (shared component) disease mapping and ecological models is presented, with illustrative examples including spatial and ecological modeling of infant mortality rates (relative uncommon events), suicide hospitalization rates (rare events) and suicide mortality rates (extremely rare events), and associated ecological risk factors in local health areas in British Columbia Canada. In particular, EBPQL interval prediction of random effects is explored by prediction uncertainty attributions with respect to uncertainties associated with estimation of random effects, fixed effects, and prior parameters. Estimation of percent attributions of EBPQL random effects prediction errors to prior uncertainty is developed in the context of GLMMs and explored in Bayesian disease mapping and ecological models, suggesting evidence that uncertainty about prior parameter(s) may have minor and negligible influence on EBPQL interval prediction of random effects in Bayesian hierarchical disease mapping and ecological modeling of moderate Poisson observations. The EBPQL inference procedure may be judiciously and profitably utilized in Bayesian disease mapping and ecological model development.

Suggested Citation

  • MacNab, Ying C. & Lin, Yi, 2009. "On empirical Bayes penalized quasi-likelihood inference in GLMMs and in Bayesian disease mapping and ecological modeling," Computational Statistics & Data Analysis, Elsevier, vol. 53(8), pages 2950-2967, June.
  • Handle: RePEc:eee:csdana:v:53:y:2009:i:8:p:2950-2967
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    References listed on IDEAS

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    1. Ying C. MacNab & Patrick J. Farrell & Paul Gustafson & Sijin Wen, 2004. "Estimation in Bayesian Disease Mapping," Biometrics, The International Biometric Society, vol. 60(4), pages 865-873, December.
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    1. Ying C. MacNab, 2018. "Rejoinder on: Some recent work on multivariate Gaussian Markov random fields," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 27(3), pages 554-569, September.
    2. Miguel Boubeta & María José Lombardía & Domingo Morales, 2016. "Empirical best prediction under area-level Poisson mixed models," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(3), pages 548-569, September.
    3. LeSage, James & Banerjee, Sudipto & Fischer, Manfred M. & Congdon, Peter, 2009. "Spatial statistics: Methods, models & computation," Computational Statistics & Data Analysis, Elsevier, vol. 53(8), pages 2781-2785, June.

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