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A Multi-Resolution Approximation for Massive Spatial Datasets

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  • Matthias Katzfuss

Abstract

Automated sensing instruments on satellites and aircraft have enabled the collection of massive amounts of high-resolution observations of spatial fields over large spatial regions. If these datasets can be efficiently exploited, they can provide new insights on a wide variety of issues. However, traditional spatial-statistical techniques such as kriging are not computationally feasible for big datasets. We propose a multi-resolution approximation (M-RA) of Gaussian processes observed at irregular locations in space. The M-RA process is specified as a linear combination of basis functions at multiple levels of spatial resolution, which can capture spatial structure from very fine to very large scales. The basis functions are automatically chosen to approximate a given covariance function, which can be nonstationary. All computations involving the M-RA, including parameter inference and prediction, are highly scalable for massive datasets. Crucially, the inference algorithms can also be parallelized to take full advantage of large distributed-memory computing environments. In comparisons using simulated data and a large satellite dataset, the M-RA outperforms a related state-of-the-art method. Supplementary materials for this article are available online.

Suggested Citation

  • Matthias Katzfuss, 2017. "A Multi-Resolution Approximation for Massive Spatial Datasets," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(517), pages 201-214, January.
  • Handle: RePEc:taf:jnlasa:v:112:y:2017:i:517:p:201-214
    DOI: 10.1080/01621459.2015.1123632
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    References listed on IDEAS

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    1. Matthias Katzfuss & Jonathan R. Stroud & Christopher K. Wikle, 2016. "Understanding the Ensemble Kalman Filter," The American Statistician, Taylor & Francis Journals, vol. 70(4), pages 350-357, October.
    2. Wenceslao González‐Manteiga & Rosa M. Crujeiras & Matthias Katzfuss & Noel Cressie, 2012. "Bayesian hierarchical spatio‐temporal smoothing for very large datasets," Environmetrics, John Wiley & Sons, Ltd., vol. 23(1), pages 94-107, February.
    3. Sudipto Banerjee & Alan E. Gelfand & Andrew O. Finley & Huiyan Sang, 2008. "Gaussian predictive process models for large spatial data sets," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(4), pages 825-848, September.
    4. Fuentes, Montserrat, 2007. "Approximate Likelihood for Large Irregularly Spaced Spatial Data," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 321-331, March.
    5. Michael L. Stein & Zhiyi Chi & Leah J. Welty, 2004. "Approximating likelihoods for large spatial data sets," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 66(2), pages 275-296, May.
    6. Caragea, Petruta C. & Smith, Richard L., 2007. "Asymptotic properties of computationally efficient alternative estimators for a class of multivariate normal models," Journal of Multivariate Analysis, Elsevier, vol. 98(7), pages 1417-1440, August.
    7. Gramacy, Robert B & Lee, Herbert K. H, 2008. "Bayesian Treed Gaussian Process Models With an Application to Computer Modeling," Journal of the American Statistical Association, American Statistical Association, vol. 103(483), pages 1119-1130.
    8. Matthias Katzfuss, 2013. "Bayesian nonstationary spatial modeling for very large datasets," Environmetrics, John Wiley & Sons, Ltd., vol. 24(3), pages 189-200, May.
    9. Schlather, Martin & Malinowski, Alexander & Menck, Peter J. & Oesting, Marco & Strokorb, Kirstin, 2015. "Analysis, Simulation and Prediction of Multivariate Random Fields with Package RandomFields," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 63(i08).
    10. Lemos, Ricardo T. & Sansó, Bruno, 2009. "A Spatio-Temporal Model for Mean, Anomaly, and Trend Fields of North Atlantic Sea Surface Temperature," Journal of the American Statistical Association, American Statistical Association, vol. 104(485), pages 5-18.
    11. Kaufman, Cari G. & Schervish, Mark J. & Nychka, Douglas W., 2008. "Covariance Tapering for Likelihood-Based Estimation in Large Spatial Data Sets," Journal of the American Statistical Association, American Statistical Association, vol. 103(484), pages 1545-1555.
    12. Kanti Mardia & Colin Goodall & Edwin Redfern & Francisco Alonso, 1998. "The Kriged Kalman filter," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 7(2), pages 217-282, December.
    13. Finn Lindgren & Håvard Rue & Johan Lindström, 2011. "An explicit link between Gaussian fields and Gaussian Markov random fields: the stochastic partial differential equation approach," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 73(4), pages 423-498, September.
    14. Noel Cressie & Gardar Johannesson, 2008. "Fixed rank kriging for very large spatial data sets," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(1), pages 209-226, February.
    15. Moreno Bevilacqua & Carlo Gaetan & Jorge Mateu & Emilio Porcu, 2012. "Estimating Space and Space-Time Covariance Functions for Large Data Sets: A Weighted Composite Likelihood Approach," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(497), pages 268-280, March.
    16. Matthias Katzfuss & Noel Cressie, 2011. "Spatio‐temporal smoothing and EM estimation for massive remote‐sensing data sets," Journal of Time Series Analysis, Wiley Blackwell, vol. 32, pages 430-446, July.
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    Cited by:

    1. Matthias Katzfuss & Joseph Guinness & Wenlong Gong & Daniel Zilber, 2020. "Vecchia Approximations of Gaussian-Process Predictions," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 25(3), pages 383-414, September.
    2. Chen, Yewen & Chang, Xiaohui & Luo, Fangzhi & Huang, Hui, 2023. "Additive dynamic models for correcting numerical model outputs," Computational Statistics & Data Analysis, Elsevier, vol. 187(C).
    3. Zilber, Daniel & Katzfuss, Matthias, 2021. "Vecchia–Laplace approximations of generalized Gaussian processes for big non-Gaussian spatial data," Computational Statistics & Data Analysis, Elsevier, vol. 153(C).
    4. Edwards, Matthew & Castruccio, Stefano & Hammerling, Dorit, 2020. "Marginally parameterized spatio-temporal models and stepwise maximum likelihood estimation," Computational Statistics & Data Analysis, Elsevier, vol. 151(C).
    5. Huang Huang & Sameh Abdulah & Ying Sun & Hatem Ltaief & David E. Keyes & Marc G. Genton, 2021. "Competition on Spatial Statistics for Large Datasets," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 26(4), pages 580-595, December.
    6. Horváth, Lajos & Kokoszka, Piotr & Wang, Shixuan, 2020. "Testing normality of data on a multivariate grid," Journal of Multivariate Analysis, Elsevier, vol. 179(C).
    7. Fangpo Wang & Anirban Bhattacharya & Alan E. Gelfand, 2018. "Rejoinder on: Process modeling for slope and aspect with application to elevation data maps," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 27(4), pages 783-786, December.
    8. Bevilacqua, Moreno & Caamaño-Carrillo, Christian & Porcu, Emilio, 2022. "Unifying compactly supported and Matérn covariance functions in spatial statistics," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    9. Matthew J. Heaton & Abhirup Datta & Andrew O. Finley & Reinhard Furrer & Joseph Guinness & Rajarshi Guhaniyogi & Florian Gerber & Robert B. Gramacy & Dorit Hammerling & Matthias Katzfuss & Finn Lindgr, 2019. "A Case Study Competition Among Methods for Analyzing Large Spatial Data," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 24(3), pages 398-425, September.
    10. Jingjie Zhang & Matthias Katzfuss, 2022. "Multi-Scale Vecchia Approximations of Gaussian Processes," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 27(3), pages 440-460, September.
    11. Bledar A. Konomi & Emily L. Kang & Ayat Almomani & Jonathan Hobbs, 2023. "Bayesian Latent Variable Co-kriging Model in Remote Sensing for Quality Flagged Observations," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 28(3), pages 423-441, September.
    12. Zammit-Mangion, Andrew & Rougier, Jonathan, 2018. "A sparse linear algebra algorithm for fast computation of prediction variances with Gaussian Markov random fields," Computational Statistics & Data Analysis, Elsevier, vol. 123(C), pages 116-130.
    13. Kirsner, Daniel & Sansó, Bruno, 2020. "Multi-scale shotgun stochastic search for large spatial datasets," Computational Statistics & Data Analysis, Elsevier, vol. 146(C).

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