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A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales

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  • Nicholas E Young
  • Catherine S Jarnevich
  • Helen R Sofaer
  • Ian Pearse
  • Julia Sullivan
  • Peder Engelstad
  • Thomas J Stohlgren

Abstract

Predictions of habitat suitability for invasive plant species can guide risk assessments at regional and national scales and inform early detection and rapid-response strategies at local scales. We present a general approach to invasive species modeling and mapping that meets objectives at multiple scales. Our methodology is designed to balance trade-offs between developing highly customized models for few species versus fitting non-specific and generic models for numerous species. We developed a national library of environmental variables known to physiologically limit plant distributions and relied on human input based on natural history knowledge to further narrow the variable set for each species before developing habitat suitability models. To ensure efficiency, we used largely automated modeling approaches and human input only at key junctures. We explore and present uncertainty by using two alternative sources of background samples, including five statistical algorithms, and constructing model ensembles. We demonstrate the use and efficiency of the Software for Assisted Habitat Modeling [SAHM 2.1.2], a package in VisTrails, which performs the majority of the modeling analyses. Our workflow includes solicitation of expert feedback on model outputs such as spatial prediction results and variable response curves, and iterative improvement based on new data availability and directed field validation of initial model results. We highlight the utility of the models for decision-making at regional and local scales with case studies of two plant species that invade natural areas: fountain grass (Pennisetum setaceum) and goutweed (Aegopodium podagraria). By balancing model automation with human intervention, we can efficiently provide land managers with mapped predicted distributions for multiple invasive species to inform decisions across spatial scales.

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  • Nicholas E Young & Catherine S Jarnevich & Helen R Sofaer & Ian Pearse & Julia Sullivan & Peder Engelstad & Thomas J Stohlgren, 2020. "A modeling workflow that balances automation and human intervention to inform invasive plant management decisions at multiple spatial scales," PLOS ONE, Public Library of Science, vol. 15(3), pages 1-21, March.
  • Handle: RePEc:plo:pone00:0229253
    DOI: 10.1371/journal.pone.0229253
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    References listed on IDEAS

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    1. Thomas J. Stohlgren & John L. Schnase, 2006. "Risk Analysis for Biological Hazards: What We Need to Know about Invasive Species," Risk Analysis, John Wiley & Sons, vol. 26(1), pages 163-173, February.
    2. Jarnevich, Catherine S. & Talbert, Marian & Morisette, Jeffery & Aldridge, Cameron & Brown, Cynthia S. & Kumar, Sunil & Manier, Daniel & Talbert, Colin & Holcombe, Tracy, 2017. "Minimizing effects of methodological decisions on interpretation and prediction in species distribution studies: An example with background selection," Ecological Modelling, Elsevier, vol. 363(C), pages 48-56.
    3. Thomas J. Stohlgren & Peter Ma & Sunil Kumar & Monique Rocca & Jeffrey T. Morisette & Catherine S. Jarnevich & Nate Benson, 2010. "Ensemble Habitat Mapping of Invasive Plant Species," Risk Analysis, John Wiley & Sons, vol. 30(2), pages 224-235, February.
    4. Barve, Narayani & Barve, Vijay & Jiménez-Valverde, Alberto & Lira-Noriega, Andrés & Maher, Sean P. & Peterson, A. Townsend & Soberón, Jorge & Villalobos, Fabricio, 2011. "The crucial role of the accessible area in ecological niche modeling and species distribution modeling," Ecological Modelling, Elsevier, vol. 222(11), pages 1810-1819.
    5. Regan Early & Bethany A. Bradley & Jeffrey S. Dukes & Joshua J. Lawler & Julian D. Olden & Dana M. Blumenthal & Patrick Gonzalez & Edwin D. Grosholz & Ines Ibañez & Luke P. Miller & Cascade J. B. Sort, 2016. "Global threats from invasive alien species in the twenty-first century and national response capacities," Nature Communications, Nature, vol. 7(1), pages 1-9, November.
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