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Understanding the Implications of Predicted Function for Assessment of Rapid Bioremediation in a Farmland-Oilfield Mixed Area

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  • Haoyu Wang

    (School of Chemical and Environment Engineering, China University of Mining & Technology (Beijing), Beijing 100083, China
    Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China)

  • Shanghua Wu

    (Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China)

  • Yuxiu Zhang

    (School of Chemical and Environment Engineering, China University of Mining & Technology (Beijing), Beijing 100083, China)

  • Tsing Bohu

    (State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology, Taipa, Macau 999078, China
    CSIRO Mineral Resources, Australian Resources and Research Centre, Kensington, WA 6151, Australia)

  • Zhihui Bai

    (Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
    College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100085, China
    Xiongan Institute of Innovation, Baoding 071700, China)

  • Xuliang Zhuang

    (Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
    College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100085, China)

Abstract

Farmland-oilfield mixed areas are fragile ecosystems that require dynamic remediation to counteract the undesirable impact of energy development. Practicable assessment methods are pivotal to a fast and accurate evaluation of the in situ bioremediation process. Petroleum pollutants impose component-dependent effects on autochthonous microbiota before and after remediation. Here, the predicted functional response of soil microbiomes to petroleum pollutants was analyzed in a historically polluted farmland-oilfield mixed area from the perspective of developing a set of feasible biomarkers for immediate post-bioremediation evaluation. An array of microbial, genetic, systematic, and phenotypic biomarkers was proposed. Our results showed that the biomarkers could proxy the stage of the bioremediation multidimensionally. We argue that functional diversity should be considered together with microbial community dynamic to evaluate the restoration status of the microbial communities in petroleum-contaminated farmland-oilfield mixed environments.

Suggested Citation

  • Haoyu Wang & Shanghua Wu & Yuxiu Zhang & Tsing Bohu & Zhihui Bai & Xuliang Zhuang, 2022. "Understanding the Implications of Predicted Function for Assessment of Rapid Bioremediation in a Farmland-Oilfield Mixed Area," Sustainability, MDPI, vol. 14(4), pages 1-14, February.
    • Handle: RePEc:gam:jsusta:v:14:y:2022:i:4:p:2248-:d:750665
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    References listed on IDEAS

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    1. Chu-Chun Yu & Ting-Chieh Chang & Chien-Sen Liao & Yi-Tang Chang, 2019. "A Comparison of the Microbial Community and Functional Genes Present in Free-Living and Soil Particle-Attached Bacteria from an Aerobic Bioslurry Reactor Treating High-Molecular-Weight PAHs," Sustainability, MDPI, vol. 11(4), pages 1-18, February.
    2. Xin Sui & Xuemei Wang & Yuhuan Li & Hongbing Ji, 2021. "Remediation of Petroleum-Contaminated Soils with Microbial and Microbial Combined Methods: Advances, Mechanisms, and Challenges," Sustainability, MDPI, vol. 13(16), pages 1-26, August.
    3. Sang-Hwan Lee & Min-Suk Kim & Jeong-Gyu Kim & Soon-Oh Kim, 2020. "Use of Soil Enzymes as Indicators for Contaminated Soil Monitoring and Sustainable Management," Sustainability, MDPI, vol. 12(19), pages 1-14, October.
    4. Peter J. Turnbaugh & Ruth E. Ley & Michael A. Mahowald & Vincent Magrini & Elaine R. Mardis & Jeffrey I. Gordon, 2006. "An obesity-associated gut microbiome with increased capacity for energy harvest," Nature, Nature, vol. 444(7122), pages 1027-1031, December.
    5. Fitzgerald, Timothy & Kuwayama, Yusuke & Olmstead, Sheila & Thompson, Alexandra, 2020. "Dynamic impacts of U.S. energy development on agricultural land use," Energy Policy, Elsevier, vol. 137(C).
    6. Ibukun O. Olasanmi & Ronald W. Thring, 2018. "The Role of Biosurfactants in the Continued Drive for Environmental Sustainability," Sustainability, MDPI, vol. 10(12), pages 1-12, December.
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