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Enhanced Sentinel Surveillance System for COVID-19 Outbreak Prediction in a Large European Dialysis Clinics Network

Author

Listed:
  • Francesco Bellocchio

    (Fresenius Medical Care Italia SpA, Palazzo Pignano, 26020 Lombardia, Italy)

  • Paola Carioni

    (Fresenius Medical Care Italia SpA, Palazzo Pignano, 26020 Lombardia, Italy)

  • Caterina Lonati

    (Center for Preclinical Research, Fondazione IRCCS Ca’ Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy)

  • Mario Garbelli

    (Fresenius Medical Care Italia SpA, Palazzo Pignano, 26020 Lombardia, Italy)

  • Francisco Martínez-Martínez

    (Santa Barbara Smart Health S. L., Parc Cientific Universitat id Valencia, Carrer del Catedràtic Agustín Escardino Benlloch, 9, 46980 Paterna, Spain)

  • Stefano Stuard

    (Fresenius Medical Care Deutschland GmbH, 61352 Bad Homburg, Germany)

  • Luca Neri

    (Fresenius Medical Care Italia SpA, Palazzo Pignano, 26020 Lombardia, Italy
    Current address: Clinical & Data Intelligence Systems—Advanced Analytics, Fresenius Medical Care Deutschland GmbH, Via Papa Giovanni Paolo II, 41, 26020 Vaiano Cremasco, Italy.)

Abstract

Accurate predictions of COVID-19 epidemic dynamics may enable timely organizational interventions in high-risk regions. We exploited the interconnection of the Fresenius Medical Care (FMC) European dialysis clinic network to develop a sentinel surveillance system for outbreak prediction. We developed an artificial intelligence-based model considering the information related to all clinics belonging to the European Nephrocare Network. The prediction tool provides risk scores of the occurrence of a COVID-19 outbreak in each dialysis center within a 2-week forecasting horizon. The model input variables include information related to the epidemic status and trends in clinical practice patterns of the target clinic, regional epidemic metrics, and the distance-weighted risk estimates of adjacent dialysis units. On the validation dates, there were 30 (5.09%), 39 (6.52%), and 218 (36.03%) clinics with two or more patients with COVID-19 infection during the 2-week prediction window. The performance of the model was suitable in all testing windows: AUC = 0.77, 0.80, and 0.81, respectively. The occurrence of new cases in a clinic propagates distance-weighted risk estimates to proximal dialysis units. Our machine learning sentinel surveillance system may allow for a prompt risk assessment and timely response to COVID-19 surges throughout networked European clinics.

Suggested Citation

  • Francesco Bellocchio & Paola Carioni & Caterina Lonati & Mario Garbelli & Francisco Martínez-Martínez & Stefano Stuard & Luca Neri, 2021. "Enhanced Sentinel Surveillance System for COVID-19 Outbreak Prediction in a Large European Dialysis Clinics Network," IJERPH, MDPI, vol. 18(18), pages 1-18, September.
  • Handle: RePEc:gam:jijerp:v:18:y:2021:i:18:p:9739-:d:636443
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    References listed on IDEAS

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    1. Elizabeth J. Williamson & Alex J. Walker & Krishnan Bhaskaran & Seb Bacon & Chris Bates & Caroline E. Morton & Helen J. Curtis & Amir Mehrkar & David Evans & Peter Inglesby & Jonathan Cockburn & Helen, 2020. "Factors associated with COVID-19-related death using OpenSAFELY," Nature, Nature, vol. 584(7821), pages 430-436, August.
    2. Jose L Herrera & Ravi Srinivasan & John S Brownstein & Alison P Galvani & Lauren Ancel Meyers, 2016. "Disease Surveillance on Complex Social Networks," PLOS Computational Biology, Public Library of Science, vol. 12(7), pages 1-16, July.
    3. Dyani Lewis, 2021. "Superspreading drives the COVID pandemic — and could help to tame it," Nature, Nature, vol. 590(7847), pages 544-546, February.
    4. Alison P. Galvani & Robert M. May, 2005. "Dimensions of superspreading," Nature, Nature, vol. 438(7066), pages 293-295, November.
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    Cited by:

    1. Tim Hulsen, 2022. "Data Science in Healthcare: COVID-19 and Beyond," IJERPH, MDPI, vol. 19(6), pages 1-4, March.

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