IDEAS home Printed from https://ideas.repec.org/a/gam/jagris/v14y2024i5p693-d1385063.html
   My bibliography  Save this article

Genetic Enhancement of Blast and Bacterial Leaf Blight Resistance in Rice Variety CO 51 through Marker-Assisted Selection

Author

Listed:
  • Samuthirapandi Subburaj

    (Department of Genetics and Plant Breeding, Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India
    These authors contributed equally to this work.)

  • Thiyagarajan Thulasinathan

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India
    These authors contributed equally to this work.)

  • Viswabharathy Sakthivel

    (Department of Genetics and Plant Breeding, Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Bharathi Ayyenar

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Rohit Kambale

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Veera Ranjani Rajagopalan

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Sudha Manickam

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Raghu Rajasekaran

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Gopalakrishnan Chellappan

    (Department of Rice, Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Kalaimagal Thiyagarajan

    (Department of Genetics and Plant Breeding, Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Manonmani Swaminathan

    (Department of Rice, Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

  • Raveendran Muthurajan

    (Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641 003, Tamil Nadu, India)

Abstract

The increased use of chemicals in rice farming poses significant issues regarding the emergence of pesticide/fungicide resistance and environmental sustainability concerns. This study was aimed at the genetic improvement of blast, bacterial leaf blight (BB) and gall midge resistance in a popular rice variety CO 51 which already harbours a blast resistance gene Pi54 . Efforts were made to pyramid an additional blast resistance gene Pi9 along with two BB resistance genes ( xa13 and Xa21 ) and two gall midge resistance genes ( Gm1 and Gm4 ) into an elite rice variety CO 51 to enhance the resistance level to biotic stresses. The superior lines were selected using functional markers conferring resistance to blast (NBS4 and Pi54MAS linked to Pi9 and Pi54 genes, respectively) and BB [( xa13Prom ( xa13 ) and pTA248 ( Xa21 )] and SSR markers linked to Gm1 (RM1328) and Gm4 (RM22550) for phenotypic screening and agronomic evaluation. The genotyping and phenotyping of F 6 and BC 2 F 6 progenies of CO 51 X 562-4, for agronomic traits and resistance to BB and blast, identified ten superior progenies in F 6 and five superior progenies in BC 2 F 6 . The breeding lines harbouring both xa13 + Xa21 exhibited high levels of resistance to BB (score ≤ 1 cm) and Pi9 + Pi54 exhibited strong resistance to blast (score ≤ 2). Identified lines can be evaluated further for varietal improvement or utilised as genetic stocks in breeding programs.

Suggested Citation

  • Samuthirapandi Subburaj & Thiyagarajan Thulasinathan & Viswabharathy Sakthivel & Bharathi Ayyenar & Rohit Kambale & Veera Ranjani Rajagopalan & Sudha Manickam & Raghu Rajasekaran & Gopalakrishnan Chel, 2024. "Genetic Enhancement of Blast and Bacterial Leaf Blight Resistance in Rice Variety CO 51 through Marker-Assisted Selection," Agriculture, MDPI, vol. 14(5), pages 1-20, April.
    • Handle: RePEc:gam:jagris:v:14:y:2024:i:5:p:693-:d:1385063
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2077-0472/14/5/693/pdf
    Download Restriction: no
    File URL: https://www.mdpi.com/2077-0472/14/5/693/
    Download Restriction: no
    ---><---

    References listed on IDEAS

    as
    1. Bharathi Ayyenar & Rohit Kambale & Sudhakar Duraialagaraja & Sudha Manickam & Vignesh Mohanavel & Priyanka Shanmugavel & Senthil Alagarsamy & Tsutomu Ishimaru & S.V. Krishna Jagadish & Geethalakshmi V, 2023. "Developing Early Morning Flowering Version of Rice Variety CO 51 to Mitigate the Heat-Induced Yield Loss," Agriculture, MDPI, vol. 13(3), pages 1-13, February.
    2. Nathaniel D. Mueller & James S. Gerber & Matt Johnston & Deepak K. Ray & Navin Ramankutty & Jonathan A. Foley, 2012. "Closing yield gaps through nutrient and water management," Nature, Nature, vol. 490(7419), pages 254-257, October.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Cao, Juan & Zhang, Zhao & Tao, Fulu & Chen, Yi & Luo, Xiangzhong & Xie, Jun, 2023. "Forecasting global crop yields based on El Nino Southern Oscillation early signals," Agricultural Systems, Elsevier, vol. 205(C).
    2. Westhoek, Henk & Ingram, John & van Berkum, Siemen & Hajer, Maarten, 2015. "The European food system and natural resources: Impacts and Options," 148th Seminar, November 30-December 1, 2015, The Hague, The Netherlands 229279, European Association of Agricultural Economists.
    3. Giacomo Falchetta & Nicolò Stevanato & Magda Moner-Girona & Davide Mazzoni & Emanuela Colombo & Manfred Hafner, 2020. "M-LED: Multi-sectoral Latent Electricity Demand Assessment for Energy Access Planning," Working Papers 2020.09, Fondazione Eni Enrico Mattei.
    4. Kathrin Stenchly & Marc Victor Hansen & Katharina Stein & Andreas Buerkert & Wilhelm Loewenstein, 2018. "Income Vulnerability of West African Farming Households to Losses in Pollination Services: A Case Study from Ouagadougou, Burkina Faso," Sustainability, MDPI, vol. 10(11), pages 1-12, November.
    5. Singh, Kuntal & McClean, Colin J. & Büker, Patrick & Hartley, Sue E. & Hill, Jane K., 2017. "Mapping regional risks from climate change for rainfed rice cultivation in India," Agricultural Systems, Elsevier, vol. 156(C), pages 76-84.
    6. Thomas M. Koutsos & Georgios C. Menexes & Andreas P. Mamolos, 2021. "The Use of Crop Yield Autocorrelation Data as a Sustainable Approach to Adjust Agronomic Inputs," Sustainability, MDPI, vol. 13(4), pages 1-17, February.
    7. Mr. Emmanuel Momolu Pope & Prof. Wilson Opile & Dr. Lucas Ngode & Dr. Chepkoech Emmy, 2023. "Assessment of Upland Rice Production Constraints and Farmers’ Preferred Varieties in Liberia," International Journal of Research and Innovation in Social Science, International Journal of Research and Innovation in Social Science (IJRISS), vol. 7(2), pages 1307-1322, February.
    8. F. Jorge Bornemann & David P. Rowell & Barbara Evans & Dan J. Lapworth & Kamazima Lwiza & David M.J. Macdonald & John H. Marsham & Kindie Tesfaye & Matthew J. Ascott & Celia Way, 2019. "Future changes and uncertainty in decision-relevant measures of East African climate," Climatic Change, Springer, vol. 156(3), pages 365-384, October.
    9. Purola, Tuomo & Lehtonen, Heikki, 2020. "Evaluating profitability of soil-renovation investments under crop rotation constraints in Finland," Agricultural Systems, Elsevier, vol. 180(C).
    10. Yibo Luan & Wenquan Zhu & Xuefeng Cui & Günther Fischer & Terence P. Dawson & Peijun Shi & Zhenke Zhang, 2019. "Cropland yield divergence over Africa and its implication for mitigating food insecurity," Mitigation and Adaptation Strategies for Global Change, Springer, vol. 24(5), pages 707-734, June.
    11. Zheng, Huifang & Mei, Peipei & Wang, Wending & Yin, Yulong & Li, Haojie & Zheng, Mengyao & Ou, Xingqi & Cui, Zhenling, 2023. "Effects of super absorbent polymer on crop yield, water productivity and soil properties: A global meta-analysis," Agricultural Water Management, Elsevier, vol. 282(C).
    12. Minghao Bai & Shenbei Zhou & Ting Tang, 2022. "A Reconstruction of Irrigated Cropland Extent in China from 2000 to 2019 Using the Synergy of Statistics and Satellite-Based Datasets," Land, MDPI, vol. 11(10), pages 1-27, September.
    13. Nina Repar & Pierrick Jan & Thomas Nemecek & Dunja Dux & Martina Alig Ceesay & Reiner Doluschitz, 2016. "Local versus Global Environmental Performance of Dairying and Their Link to Economic Performance: A Case Study of Swiss Mountain Farms," Sustainability, MDPI, vol. 8(12), pages 1-19, December.
    14. Zhang, Bangbang & Li, Xian & Chen, Haibin & Niu, Wenhao & Kong, Xiangbin & Yu, Qiang & Zhao, Minjuan & Xia, Xianli, 2022. "Identifying opportunities to close yield gaps in China by use of certificated cultivars to estimate potential productivity," Land Use Policy, Elsevier, vol. 117(C).
    15. Hampf, Anna C. & Carauta, Marcelo & Latynskiy, Evgeny & Libera, Affonso A.D. & Monteiro, Leonardo & Sentelhas, Paulo & Troost, Christian & Berger, Thomas & Nendel, Claas, 2018. "The biophysical and socio-economic dimension of yield gaps in the southern Amazon – A bio-economic modelling approach," Agricultural Systems, Elsevier, vol. 165(C), pages 1-13.
    16. Dapeng WANG & Liang ZHENG & Songdong GU & Yuefeng SHI & Long LIANG & Fanqiao MENG & Yanbin GUO & Xiaotang JU & Wenliang WU, 2018. "Soil nitrate accumulation and leaching in conventional, optimized and organic cropping systems," Plant, Soil and Environment, Czech Academy of Agricultural Sciences, vol. 64(4), pages 156-163.
    17. Xiong, Wei & Balkovič, Juraj & van der Velde, Marijn & Zhang, Xuesong & Izaurralde, R. César & Skalský, Rastislav & Lin, Erda & Mueller, Nathan & Obersteiner, Michael, 2014. "A calibration procedure to improve global rice yield simulations with EPIC," Ecological Modelling, Elsevier, vol. 273(C), pages 128-139.
    18. Zecca, Francesco & D’Errico, Marco, 2021. "Food security and land use: The Ethiopian case," Economia agro-alimentare / Food Economy, Italian Society of Agri-food Economics/Società Italiana di Economia Agro-Alimentare (SIEA), vol. 23(2), July.
    19. Leroux, L. & Falconnier, G.N. & Diouf, A.A. & Ndao, B. & Gbodjo, J.E. & Tall, L. & Balde, A.A. & Clermont-Dauphin, C. & Bégué, A. & Affholder, F. & Roupsard, O., 2020. "Using remote sensing to assess the effect of trees on millet yield in complex parklands of Central Senegal," Agricultural Systems, Elsevier, vol. 184(C).
    20. Feng, Yu & Jia, Yue & Cui, Ningbo & Zhao, Lu & Li, Chen & Gong, Daozhi, 2017. "Calibration of Hargreaves model for reference evapotranspiration estimation in Sichuan basin of southwest China," Agricultural Water Management, Elsevier, vol. 181(C), pages 1-9.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jagris:v:14:y:2024:i:5:p:693-:d:1385063. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.