IDEAS home Printed from https://ideas.repec.org/a/eee/phsmap/v642y2024ics0378437124002735.html
   My bibliography  Save this article

Comparison of two statistical measures of complexity applied to ecological bipartite networks

Author

Listed:
  • Huaylla, Claudia A.
  • Kuperman, Marcelo N.
  • Garibaldi, Lucas A.

Abstract

Networks are a convenient way to represent many interactions among different entities as they provide an efficient and clear methodology to evaluate and organize relevant data. While there are many features for characterizing networks, a quantity seems rather elusive: Complexity. The quantification of the complexity of networks is nowadays a fundamental problem. Here, we present a novel tool for identifying the complexity of ecological networks. We compare the behavior of two relevant indices of complexity: K-complexity and Single Value Decomposition (SVD) entropy. For that, we use real data and two types of null models. Both null models consist of randomized networks built by swapping a controlled number of links of the original ones. We analyze 23 plant–pollinator and 19 host-parasite networks as case studies. Our results show that (a) it is necessary to calculate, not only the original network K-complexity and SVD entropy but also to calculate the corresponding indices of the randomized networks (b) the density and degree distribution are essential in the characterization of a network and the randomized networks are a suitable tool to detect the network complexity, and (c) plant–pollinator networks are more complex than host-parasite networks. We found that, for the first null model, K-complexity and SVD did not change with link swapping in both pollinator-plant and host-parasite networks. For the second null model, K-complexity for pollinator-plant networks generally decreased with an increasing number of links swapped (i.e. negative slope), showing that plant–pollinator networks lose complexity with increasing link swapping. In contrast, there was a positive slope between K-complexity and link swapping for host-parasite networks, showing that these networks are less complex than plant–pollinator networks. For both types of networks, in general, the slope between K-complexity and the number of links swapped became more positive with network density. Overall, SVD entropy was less responsive to link swapping. Our analyses show that although SVD entropy has been widely used to characterize network complexity, K-complexity is a more reliable tool. Additionally, they show that degree distribution and density are important drivers of network complexity and should be accounted for in future studies.

Suggested Citation

  • Huaylla, Claudia A. & Kuperman, Marcelo N. & Garibaldi, Lucas A., 2024. "Comparison of two statistical measures of complexity applied to ecological bipartite networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 642(C).
  • Handle: RePEc:eee:phsmap:v:642:y:2024:i:c:s0378437124002735
    DOI: 10.1016/j.physa.2024.129764
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0378437124002735
    Download Restriction: Full text for ScienceDirect subscribers only. Journal offers the option of making the article available online on Science direct for a fee of $3,000

    File URL: https://libkey.io/10.1016/j.physa.2024.129764?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Steven H. Strogatz, 2001. "Exploring complex networks," Nature, Nature, vol. 410(6825), pages 268-276, March.
    2. Huaylla, Claudia A. & Nacif, Marcos E. & Coulin, Carolina & Kuperman, Marcelo N. & Garibaldi, Lucas A., 2021. "Decoding information in multilayer ecological networks: The keystone species case," Ecological Modelling, Elsevier, vol. 460(C).
    3. José M. Montoya & Stuart L. Pimm & Ricard V. Solé, 2006. "Ecological networks and their fragility," Nature, Nature, vol. 442(7100), pages 259-264, July.
    4. Fei Tan & Yongxiang Xia & Boyao Zhu, 2014. "Link Prediction in Complex Networks: A Mutual Information Perspective," PLOS ONE, Public Library of Science, vol. 9(9), pages 1-8, September.
    5. Fernando Soler-Toscano & Hector Zenil & Jean-Paul Delahaye & Nicolas Gauvrit, 2014. "Calculating Kolmogorov Complexity from the Output Frequency Distributions of Small Turing Machines," PLOS ONE, Public Library of Science, vol. 9(5), pages 1-18, May.
    6. Meila, Marina, 2007. "Comparing clusterings--an information based distance," Journal of Multivariate Analysis, Elsevier, vol. 98(5), pages 873-895, May.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Piccardi, Carlo & Calatroni, Lisa & Bertoni, Fabio, 2010. "Communities in Italian corporate networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(22), pages 5247-5258.
    2. Bellingeri, Michele & Cassi, Davide & Vincenzi, Simone, 2013. "Increasing the extinction risk of highly connected species causes a sharp robust-to-fragile transition in empirical food webs," Ecological Modelling, Elsevier, vol. 251(C), pages 1-8.
    3. Daniel Straulino & Mattie Landman & Neave O'Clery, 2020. "A bi-directional approach to comparing the modular structure of networks," Papers 2010.06568, arXiv.org.
    4. Christopher R Stephens & Joaquín Giménez Heau & Camila González & Carlos N Ibarra-Cerdeña & Victor Sánchez-Cordero & Constantino González-Salazar, 2009. "Using Biotic Interaction Networks for Prediction in Biodiversity and Emerging Diseases," PLOS ONE, Public Library of Science, vol. 4(5), pages 1-9, May.
    5. Emerson, Isaac Arnold & Amala, Arumugam, 2017. "Protein contact maps: A binary depiction of protein 3D structures," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 465(C), pages 782-791.
    6. Assaf Almog & Ferry Besamusca & Mel MacMahon & Diego Garlaschelli, 2015. "Mesoscopic Community Structure of Financial Markets Revealed by Price and Sign Fluctuations," PLOS ONE, Public Library of Science, vol. 10(7), pages 1-16, July.
    7. Ruiz Vargas, E. & Mitchell, D.G.V. & Greening, S.G. & Wahl, L.M., 2014. "Topology of whole-brain functional MRI networks: Improving the truncated scale-free model," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 405(C), pages 151-158.
    8. Igor Belykh & Mateusz Bocian & Alan R. Champneys & Kevin Daley & Russell Jeter & John H. G. Macdonald & Allan McRobie, 2021. "Emergence of the London Millennium Bridge instability without synchronisation," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    9. Berahmand, Kamal & Bouyer, Asgarali & Samadi, Negin, 2018. "A new centrality measure based on the negative and positive effects of clustering coefficient for identifying influential spreaders in complex networks," Chaos, Solitons & Fractals, Elsevier, vol. 110(C), pages 41-54.
    10. Zhang, Yun & Liu, Yongguo & Li, Jieting & Zhu, Jiajing & Yang, Changhong & Yang, Wen & Wen, Chuanbiao, 2020. "WOCDA: A whale optimization based community detection algorithm," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 539(C).
    11. Soh, Harold & Lim, Sonja & Zhang, Tianyou & Fu, Xiuju & Lee, Gary Kee Khoon & Hung, Terence Gih Guang & Di, Pan & Prakasam, Silvester & Wong, Limsoon, 2010. "Weighted complex network analysis of travel routes on the Singapore public transportation system," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(24), pages 5852-5863.
    12. Wang, Qingyun & Duan, Zhisheng & Chen, Guanrong & Feng, Zhaosheng, 2008. "Synchronization in a class of weighted complex networks with coupling delays," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 387(22), pages 5616-5622.
    13. He, He & Yang, Bo & Hu, Xiaoming, 2016. "Exploring community structure in networks by consensus dynamics," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 450(C), pages 342-353.
    14. Dingle, Kamaludin & Kamal, Rafiq & Hamzi, Boumediene, 2023. "A note on a priori forecasting and simplicity bias in time series," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 609(C).
    15. Wu, Tianyu & Huang, Xia & Chen, Xiangyong & Wang, Jing, 2020. "Sampled-data H∞ exponential synchronization for delayed semi-Markov jump CDNs: A looped-functional approach," Applied Mathematics and Computation, Elsevier, vol. 377(C).
    16. Yang, Hyeonchae & Jung, Woo-Sung, 2016. "Structural efficiency to manipulate public research institution networks," Technological Forecasting and Social Change, Elsevier, vol. 110(C), pages 21-32.
    17. Zhu, Mixin & Zhou, Xiaojun, 2023. "Hybrid opportunistic maintenance policy for serial-parallel multi-station manufacturing systems with spare part overlap," Reliability Engineering and System Safety, Elsevier, vol. 236(C).
    18. Ye, Dan & Yang, Xiang & Su, Lei, 2017. "Fault-tolerant synchronization control for complex dynamical networks with semi-Markov jump topology," Applied Mathematics and Computation, Elsevier, vol. 312(C), pages 36-48.
    19. Dragicevic, Arnaud Z. & Sinclair-Desgagné, Bernard, 2013. "Sustainable network dynamics," Ecological Modelling, Elsevier, vol. 270(C), pages 43-53.
    20. Luo, Mengzhuo & Liu, Xinzhi & Zhong, Shouming & Cheng, Jun, 2018. "Synchronization of multi-stochastic-link complex networks via aperiodically intermittent control with two different switched periods," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 509(C), pages 20-38.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:phsmap:v:642:y:2024:i:c:s0378437124002735. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/physica-a-statistical-mechpplications/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.