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Classification of functional data: A segmentation approach

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  • Li, Bin
  • Yu, Qingzhao

Abstract

We suggest a classification and feature extraction method on functional data where the predictor variables are curves. The method, called functional segment discriminant analysis (FSDA), combines the classical linear discriminant analysis and support vector machine. FSDA is particularly useful for irregular functional data, characterized by spatial heterogeneity and local patterns like spikes. FSDA not only reduces the computation and storage burden by using a fraction of the spectrum, but also identifies important predictors and extracts features. FSDA is highly flexible, easy to incorporate information from other data sources and/or prior knowledge from the investigators. We apply FSDA to two public domain data sets and discuss the understanding developed from the study.

Suggested Citation

  • Li, Bin & Yu, Qingzhao, 2008. "Classification of functional data: A segmentation approach," Computational Statistics & Data Analysis, Elsevier, vol. 52(10), pages 4790-4800, June.
  • Handle: RePEc:eee:csdana:v:52:y:2008:i:10:p:4790-4800
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    References listed on IDEAS

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    1. Yuedong Wang, 1998. "Mixed effects smoothing spline analysis of variance," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 60(1), pages 159-174.
    2. Wensheng Guo, 2002. "Functional Mixed Effects Models," Biometrics, The International Biometric Society, vol. 58(1), pages 121-128, March.
    3. Jeffrey S. Morris & Raymond J. Carroll, 2006. "Wavelet‐based functional mixed models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(2), pages 179-199, April.
    4. John A. Rice & Colin O. Wu, 2001. "Nonparametric Mixed Effects Models for Unequally Sampled Noisy Curves," Biometrics, The International Biometric Society, vol. 57(1), pages 253-259, March.
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    Cited by:

    1. Olusola Samuel Makinde, 2019. "Classification rules based on distribution functions of functional depth," Statistical Papers, Springer, vol. 60(3), pages 629-640, June.
    2. Hongxiao Zhu & Philip J. Brown & Jeffrey S. Morris, 2012. "Robust Classification of Functional and Quantitative Image Data Using Functional Mixed Models," Biometrics, The International Biometric Society, vol. 68(4), pages 1260-1268, December.
    3. Li Cai & Lisha Li & Simin Huang & Liang Ma & Lijian Yang, 2020. "Oracally efficient estimation for dense functional data with holiday effects," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 29(1), pages 282-306, March.
    4. Alonso, Andrés M. & Casado, David & Romo, Juan, 2012. "Supervised classification for functional data: A weighted distance approach," Computational Statistics & Data Analysis, Elsevier, vol. 56(7), pages 2334-2346.
    5. Martin-Barragan, Belen & Lillo, Rosa & Romo, Juan, 2014. "Interpretable support vector machines for functional data," European Journal of Operational Research, Elsevier, vol. 232(1), pages 146-155.
    6. Poskitt, D.S. & Sengarapillai, Arivalzahan, 2013. "Description length and dimensionality reduction in functional data analysis," Computational Statistics & Data Analysis, Elsevier, vol. 58(C), pages 98-113.
    7. Maria Ruiz-Medina & Rosa Espejo & Elvira Romano, 2014. "Spatial functional normal mixed effect approach for curve classification," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 8(3), pages 257-285, September.
    8. Epifanio, Irene & Ventura-Campos, Noelia, 2011. "Functional data analysis in shape analysis," Computational Statistics & Data Analysis, Elsevier, vol. 55(9), pages 2758-2773, September.
    9. Joseph, Esdras & Galeano San Miguel, Pedro & Lillo Rodríguez, Rosa Elvira, 2013. "The Mahalanobis distance for functional data with applications to classification," DES - Working Papers. Statistics and Econometrics. WS ws131312, Universidad Carlos III de Madrid. Departamento de Estadística.
    10. Flores Díaz, Ramón Jesús & Lillo Rodríguez, Rosa Elvira & Romo, Juan, 2014. "Homogeneity test for functional data based on depth measures," DES - Working Papers. Statistics and Econometrics. WS ws140101, Universidad Carlos III de Madrid. Departamento de Estadística.
    11. Alonso Fernández, Andrés Modesto & Casado, David & Romo, Juan, 2009. "Classification of functional data: a weighted distance approach," DES - Working Papers. Statistics and Econometrics. WS ws093915, Universidad Carlos III de Madrid. Departamento de Estadística.
    12. Llop, P. & Forzani, L. & Fraiman, R., 2011. "On local times, density estimation and supervised classification from functional data," Journal of Multivariate Analysis, Elsevier, vol. 102(1), pages 73-86, January.
    13. Valencia García, Dalia Jazmin & Lillo Rodríguez, Rosa Elvira & Romo, Juan, 2013. "Spearman coefficient for functions," DES - Working Papers. Statistics and Econometrics. WS ws133329, Universidad Carlos III de Madrid. Departamento de Estadística.
    14. Mia Hubert & Peter Rousseeuw & Pieter Segaert, 2017. "Multivariate and functional classification using depth and distance," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 11(3), pages 445-466, September.
    15. Guanqun Cao & Lijian Yang & David Todem, 2012. "Simultaneous inference for the mean function based on dense functional data," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 24(2), pages 359-377.

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