IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v180y2023ics0167947322002420.html
   My bibliography  Save this article

Covariate dependent Beta-GOS process

Author

Listed:
  • Chen, Kunzhi
  • Shen, Weining
  • Zhu, Weixuan

Abstract

Covariate-dependent processes have been widely used in Bayesian nonparametric statistics thanks to their flexibility to incorporate covariate information and correlation among process realizations. Unlike most of the existing work that focuses on extensions of exchangeable species sampling processes such as Dirichlet process, a new class of covariate-dependent nonexchangeable priors is proposed by considering the generalization of an nonexchangeable sequence, namely the Beta-GOS model. The proposed prior has an equivalent formulation under a continuous kernel mixture. It also has a latent variable representation that leads to a natural nonexchangeable parallel with the classical dependent Dirichlet process formulation. This prior is further applied in regression and autoregressive models and it is shown that its posterior sampling algorithm enjoys the same computational complexity with that of the Beta-GOS. The excellent numerical performance of the method is demonstrated via simulation and two real data examples.

Suggested Citation

  • Chen, Kunzhi & Shen, Weining & Zhu, Weixuan, 2023. "Covariate dependent Beta-GOS process," Computational Statistics & Data Analysis, Elsevier, vol. 180(C).
  • Handle: RePEc:eee:csdana:v:180:y:2023:i:c:s0167947322002420
    DOI: 10.1016/j.csda.2022.107662
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0167947322002420
    Download Restriction: Full text for ScienceDirect subscribers only.

    File URL: https://libkey.io/10.1016/j.csda.2022.107662?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. De Iorio, Maria & Muller, Peter & Rosner, Gary L. & MacEachern, Steven N., 2004. "An ANOVA Model for Dependent Random Measures," Journal of the American Statistical Association, American Statistical Association, vol. 99, pages 205-215, January.
    2. Maria De Iorio & Wesley O. Johnson & Peter Müller & Gary L. Rosner, 2009. "Bayesian Nonparametric Nonproportional Hazards Survival Modeling," Biometrics, The International Biometric Society, vol. 65(3), pages 762-771, September.
    3. A. Jara & T. E. Hanson, 2011. "A class of mixtures of dependent tail-free processes," Biometrika, Biometrika Trust, vol. 98(3), pages 553-566.
    4. Gelfand, Alan E. & Kottas, Athanasios & MacEachern, Steven N., 2005. "Bayesian Nonparametric Spatial Modeling With Dirichlet Process Mixing," Journal of the American Statistical Association, American Statistical Association, vol. 100, pages 1021-1035, September.
    5. Xu Gao & Babak Shahbaba & Hernando Ombao, 2018. "Modeling Binary Time Series Using Gaussian Processes with Application to Predicting Sleep States," Journal of Classification, Springer;The Classification Society, vol. 35(3), pages 549-579, October.
    6. Edoardo M. Airoldi & Thiago Costa & Federico Bassetti & Fabrizio Leisen & Michele Guindani, 2014. "Generalized Species Sampling Priors With Latent Beta Reinforcements," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(508), pages 1466-1480, December.
    7. Lau, John W. & So, Mike K.P., 2008. "Bayesian mixture of autoregressive models," Computational Statistics & Data Analysis, Elsevier, vol. 53(1), pages 38-60, September.
    8. Jason A. Duan & Michele Guindani & Alan E. Gelfand, 2007. "Generalized Spatial Dirichlet Process Models," Biometrika, Biometrika Trust, vol. 94(4), pages 809-825.
    9. Rolando De la Cruz‐Mesía & Fernando A. Quintana & Peter Müller, 2007. "Semiparametric Bayesian classification with longitudinal markers," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 56(2), pages 119-137, March.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Kurtis Shuler & Samuel Verbanic & Irene A. Chen & Juhee Lee, 2021. "A Bayesian nonparametric analysis for zero‐inflated multivariate count data with application to microbiome study," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 70(4), pages 961-979, August.
    2. Bhattacharya, Indrabati & Ghosal, Subhashis, 2021. "Bayesian multivariate quantile regression using Dependent Dirichlet Process prior," Journal of Multivariate Analysis, Elsevier, vol. 185(C).
    3. Kassandra Fronczyk & Athanasios Kottas, 2017. "Risk Assessment for Toxicity Experiments with Discrete and Continuous Outcomes: A Bayesian Nonparametric Approach," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 22(4), pages 585-601, December.
    4. Michele Guindani & Wesley O. Johnson, 2018. "More nonparametric Bayesian inference in applications," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 27(2), pages 239-251, June.
    5. Andrés F. Barrientos & Alejandro Jara & Fernando A. Quintana, 2017. "Fully Nonparametric Regression for Bounded Data Using Dependent Bernstein Polynomials," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(518), pages 806-825, April.
    6. Gutiérrez, Luis & Mena, Ramsés H. & Ruggiero, Matteo, 2016. "A time dependent Bayesian nonparametric model for air quality analysis," Computational Statistics & Data Analysis, Elsevier, vol. 95(C), pages 161-175.
    7. Antonio Lijoi & Bernardo Nipoti, 2013. "A class of hazard rate mixtures for combining survival data from different experiments," DEM Working Papers Series 059, University of Pavia, Department of Economics and Management.
    8. Antonio Lijoi & Bernardo Nipoti, 2014. "A Class of Hazard Rate Mixtures for Combining Survival Data From Different Experiments," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(506), pages 802-814, June.
    9. Stefano Favaro & Antonio Lijoi & Igor Prünster, 2012. "On the stick–breaking representation of normalized inverse Gaussian priors," DEM Working Papers Series 008, University of Pavia, Department of Economics and Management.
    10. Pati, Debdeep & Dunson, David B. & Tokdar, Surya T., 2013. "Posterior consistency in conditional distribution estimation," Journal of Multivariate Analysis, Elsevier, vol. 116(C), pages 456-472.
    11. Abel Rodriguez & Enrique ter Horst, 2008. "Measuring expectations in options markets: An application to the SP500 index," Papers 0901.0033, arXiv.org.
    12. Cornwall, Gary J. & Parent, Olivier, 2017. "Embracing heterogeneity: the spatial autoregressive mixture model," Regional Science and Urban Economics, Elsevier, vol. 64(C), pages 148-161.
    13. Bruno Scarpa & David B. Dunson, 2009. "Bayesian Hierarchical Functional Data Analysis Via Contaminated Informative Priors," Biometrics, The International Biometric Society, vol. 65(3), pages 772-780, September.
    14. Yushu Shi & Purushottam Laud & Joan Neuner, 2021. "A dependent Dirichlet process model for survival data with competing risks," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 27(1), pages 156-176, January.
    15. Bassetti, Federico & Casarin, Roberto & Leisen, Fabrizio, 2014. "Beta-product dependent Pitman–Yor processes for Bayesian inference," Journal of Econometrics, Elsevier, vol. 180(1), pages 49-72.
    16. Haiming Zhou & Timothy Hanson & Jiajia Zhang, 2017. "Generalized accelerated failure time spatial frailty model for arbitrarily censored data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 23(3), pages 495-515, July.
    17. Mahdi Hosseinpouri & Majid Jafari Khaledi, 2019. "An area-specific stick breaking process for spatial data," Statistical Papers, Springer, vol. 60(1), pages 199-221, February.
    18. Juhee Lee & Peter F. Thall & Bora Lim & Pavlos Msaouel, 2022. "Utility‐based Bayesian personalized treatment selection for advanced breast cancer," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 71(5), pages 1605-1622, November.
    19. repec:jss:jstsof:40:i05 is not listed on IDEAS
    20. Athanasios Kottas & Milovan Krnjajić, 2009. "Bayesian Semiparametric Modelling in Quantile Regression," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 36(2), pages 297-319, June.
    21. Christoph Hellmayr & Alan E. Gelfand, 2021. "A Partition Dirichlet Process Model for Functional Data Analysis," Sankhya B: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 83(1), pages 30-65, May.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:180:y:2023:i:c:s0167947322002420. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.