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Hybrid control on bifurcation for a delayed fractional gene regulatory network

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  • Huang, Chengdai
  • Cao, Jinde
  • Xiao, Min

Abstract

A novel delayed fractional-order gene regulatory network model is proposed in this paper. Firstly, the sum of delays is chosen as the bifurcation parameter, the conditions of the existence for the Hopf bifurcation are obtained by analyzing the associated characteristic equation. Then, it is the first time that a hybrid controller is designed to control the Hopf bifurcation for the proposed network. It is demonstrated that both fractional order and feedback gain can effectively control the dynamics of such network, the stability domain can be extended under the small fractional order or feedback gain. The controller is enough to delay the onset of the Hopf bifurcation and achieve some desirable dynamical behaviors by changing the appropriate order or feedback gain. Finally, numerical simulations are employed to justify the validity of our theoretical analysis.

Suggested Citation

  • Huang, Chengdai & Cao, Jinde & Xiao, Min, 2016. "Hybrid control on bifurcation for a delayed fractional gene regulatory network," Chaos, Solitons & Fractals, Elsevier, vol. 87(C), pages 19-29.
    • Handle: RePEc:eee:chsofr:v:87:y:2016:i:c:p:19-29
    DOI: 10.1016/j.chaos.2016.02.036
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    1. Perc, Matjaž & Grigolini, Paolo, 2013. "Collective behavior and evolutionary games – An introduction," Chaos, Solitons & Fractals, Elsevier, vol. 56(C), pages 1-5.
    2. Shen, Jianwei & Liu, Zengrong & Zheng, Weixing & Xu, Fengdan & Chen, Luonan, 2009. "Oscillatory dynamics in a simple gene regulatory network mediated by small RNAs," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 388(14), pages 2995-3000.
    3. Michael B. Elowitz & Stanislas Leibler, 2000. "A synthetic oscillatory network of transcriptional regulators," Nature, Nature, vol. 403(6767), pages 335-338, January.
    4. Jinglei Tian & Yongguang Yu & Hu Wang, 2014. "Stability and Bifurcation of Two Kinds of Three-Dimensional Fractional Lotka-Volterra Systems," Mathematical Problems in Engineering, Hindawi, vol. 2014, pages 1-8, March.
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    Cited by:

    1. Li, Peiluan & Gao, Rong & Xu, Changjin & Ahmad, Shabir & Li, Ying & Akgül, Ali, 2023. "Bifurcation behavior and PDγ control mechanism of a fractional delayed genetic regulatory model," Chaos, Solitons & Fractals, Elsevier, vol. 168(C).
    2. Kaslik, Eva & Rădulescu, Ileana Rodica, 2022. "Stability and bifurcations in fractional-order gene regulatory networks," Applied Mathematics and Computation, Elsevier, vol. 421(C).
    3. Arjunan, Mani Mallika & Abdeljawad, Thabet & Anbalagan, Pratap, 2022. "Impulsive effects on fractional order time delayed gene regulatory networks: Asymptotic stability analysis," Chaos, Solitons & Fractals, Elsevier, vol. 154(C).
    4. Huang, Chengdai, 2018. "Multiple scales scheme for bifurcation in a delayed extended van der Pol oscillator," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 490(C), pages 643-652.
    5. Li, Hong-Li & Hu, Cheng & Jiang, Yao-Lin & Wang, Zuolei & Teng, Zhidong, 2016. "Pinning adaptive and impulsive synchronization of fractional-order complex dynamical networks," Chaos, Solitons & Fractals, Elsevier, vol. 92(C), pages 142-149.
    6. Yang, Juanping & Sheng, Yuhong & Li, Hong-Li & Hu, Cheng, 2023. "Stability and adaptive control-based synchronization of delayed uncertain fractional-order gene regulatory networks," Chaos, Solitons & Fractals, Elsevier, vol. 174(C).
    7. Zhang, Yan-Jie & Liu, Song & Yang, Ran & Tan, Ying-Ying & Li, Xiaoyan, 2019. "Global synchronization of fractional coupled networks with discrete and distributed delays," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 514(C), pages 830-837.
    8. Huang, Chengdai & Meng, Yijie & Cao, Jinde & Alsaedi, Ahmed & Alsaadi, Fuad E., 2017. "New bifurcation results for fractional BAM neural network with leakage delay," Chaos, Solitons & Fractals, Elsevier, vol. 100(C), pages 31-44.
    9. Fang, Qingxiang & Peng, Jigen, 2018. "Synchronization of fractional-order linear complex networks with directed coupling topology," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 490(C), pages 542-553.
    10. Zhou, Weigang & Huang, Chengdai & Xiao, Min & Cao, Jinde, 2019. "Hybrid tactics for bifurcation control in a fractional-order delayed predator–prey model," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 515(C), pages 183-191.
    11. Huang, Chengdai & Cao, Jinde & Xiao, Min & Alsaedi, Ahmed & Hayat, Tasawar, 2017. "Bifurcations in a delayed fractional complex-valued neural network," Applied Mathematics and Computation, Elsevier, vol. 292(C), pages 210-227.
    12. Bahrampour, Elham & Asemani, Mohammad Hassan & Dehghani, Maryam, 2023. "Robust global synchronization of delayed incommensurate fractional-order gene regulatory networks," Chaos, Solitons & Fractals, Elsevier, vol. 172(C).
    13. Huang, Chengdai & Cao, Jinde & Xiao, Min & Alsaedi, Ahmed & Alsaadi, Fuad E., 2017. "Controlling bifurcation in a delayed fractional predator–prey system with incommensurate orders," Applied Mathematics and Computation, Elsevier, vol. 293(C), pages 293-310.
    14. Xu, Changjin & Liao, Maoxin & Li, Peiluan & Yuan, Shuai, 2021. "Impact of leakage delay on bifurcation in fractional-order complex-valued neural networks," Chaos, Solitons & Fractals, Elsevier, vol. 142(C).
    15. Narayanan, G. & Syed Ali, M. & Karthikeyan, Rajagopal & Rajchakit, Grienggrai & Jirawattanapanit, Anuwat, 2022. "Novel adaptive strategies for synchronization control mechanism in nonlinear dynamic fuzzy modeling of fractional-order genetic regulatory networks," Chaos, Solitons & Fractals, Elsevier, vol. 165(P1).
    16. repec:taf:tsysxx:v:48:y:2017:i:7:p:1460-1471 is not listed on IDEAS

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