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The k-NN algorithm for compositional data: a revised approach with and without zero values present

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  • Tsagris, Michail

Abstract

In compositional data, an observation is a vector with non-negative components which sum to a constant, typically 1. Data of this type arise in many areas, such as geology, archaeology, biology, economics and political science among others. The goal of this paper is to extend the taxicab metric and a newly suggested metric for com-positional data by employing a power transformation. Both metrics are to be used in the k-nearest neighbours algorithm regardless of the presence of zeros. Examples with real data are exhibited.

Suggested Citation

  • Tsagris, Michail, 2014. "The k-NN algorithm for compositional data: a revised approach with and without zero values present," MPRA Paper 65866, University Library of Munich, Germany.
    • Handle: RePEc:pra:mprapa:65866
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    References listed on IDEAS

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    1. J. L. Scealy & A. H. Welsh, 2011. "Regression for compositional data by using distributions defined on the hypersphere," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 73(3), pages 351-375, June.
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    4. Martín-Fernández, J.A. & Hron, K. & Templ, M. & Filzmoser, P. & Palarea-Albaladejo, J., 2012. "Model-based replacement of rounded zeros in compositional data: Classical and robust approaches," Computational Statistics & Data Analysis, Elsevier, vol. 56(9), pages 2688-2704.
    5. Paulo Rodrigues & Ana Lima, 2009. "Analysis of an European union election using principal component analysis," Statistical Papers, Springer, vol. 50(4), pages 895-904, August.
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    More about this item

    Keywords

    compositional data; entropy; k-NN algorithm; metric; supervised classification;
    All these keywords.

    JEL classification:

    • C18 - Mathematical and Quantitative Methods - - Econometric and Statistical Methods and Methodology: General - - - Methodolical Issues: General

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