Parameter identification for a nonlinear enzyme-catalytic dynamic system with time-delays
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DOI: 10.1007/s10898-014-0245-4
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- Ahonen, H. & de Alvarenga, A.G. & Amaral, A.R.S., 2014. "Simulated annealing and tabu search approaches for the Corridor Allocation Problem," European Journal of Operational Research, Elsevier, vol. 232(1), pages 221-233.
- A. Ferreiro & J. García & J. López-Salas & C. Vázquez, 2013. "An efficient implementation of parallel simulated annealing algorithm in GPUs," Journal of Global Optimization, Springer, vol. 57(3), pages 863-890, November.
- N. Barkai & S. Leibler, 1997. "Robustness in simple biochemical networks," Nature, Nature, vol. 387(6636), pages 913-917, June.
- Yuan, Jinlong & Zhu, Xi & Zhang, Xu & Yin, Hongchao & Feng, Enmin & Xiu, Zhilong, 2014. "Robust identification of enzymatic nonlinear dynamical systems for 1,3-propanediol transport mechanisms in microbial batch culture," Applied Mathematics and Computation, Elsevier, vol. 232(C), pages 150-163.
- Ishibuchi, Hisao & Misaki, Shinta & Tanaka, Hideo, 1995. "Modified simulated annealing algorithms for the flow shop sequencing problem," European Journal of Operational Research, Elsevier, vol. 81(2), pages 388-398, March.
- U. Alon & M. G. Surette & N. Barkai & S. Leibler, 1999. "Robustness in bacterial chemotaxis," Nature, Nature, vol. 397(6715), pages 168-171, January.
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Keywords
Parameter identification; Time-delay system; Biological robustness; Penalty approach; Parallel optimization;All these keywords.
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