IDEAS home Printed from https://ideas.repec.org/a/taf/japsta/v37y2010i8p1399-1406.html
   My bibliography  Save this article

A real survival analysis application via variable selection methods for Cox's proportional hazards model

Author

Listed:
  • Emmanouil Androulakis
  • Christos Koukouvinos
  • Kalliopi Mylona
  • Filia Vonta

Abstract

Variable selection is fundamental to high-dimensional statistical modeling in diverse fields of sciences. In our health study, different statistical methods are applied to analyze trauma annual data, collected by 30 General Hospitals in Greece. The dataset consists of 6334 observations and 111 factors that include demographic, transport, and clinical data. The statistical methods employed in this work are the nonconcave penalized likelihood methods, Smoothly Clipped Absolute Deviation, Least Absolute Shrinkage and Selection Operator, and Hard, the maximum partial likelihood estimation method, and the best subset variable selection, adjusted to Cox's proportional hazards model and used to detect possible risk factors, which affect the length of stay in a hospital. A variety of different statistical models are considered, with respect to the combinations of factors while censored observations are present. A comparative survey reveals several differences between results and execution times of each method. Finally, we provide useful biological justification of our results.

Suggested Citation

  • Emmanouil Androulakis & Christos Koukouvinos & Kalliopi Mylona & Filia Vonta, 2010. "A real survival analysis application via variable selection methods for Cox's proportional hazards model," Journal of Applied Statistics, Taylor & Francis Journals, vol. 37(8), pages 1399-1406.
  • Handle: RePEc:taf:japsta:v:37:y:2010:i:8:p:1399-1406
    DOI: 10.1080/02664760903038406
    as

    Download full text from publisher

    File URL: http://www.tandfonline.com/doi/abs/10.1080/02664760903038406
    Download Restriction: Access to full text is restricted to subscribers.

    File URL: https://libkey.io/10.1080/02664760903038406?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    2. A. Antoniadis, 1997. "Wavelets in statistics: A review," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 6(2), pages 97-130, August.
    3. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    4. Jianqing Fan, 1997. "Comments on «Wavelets in statistics: A review» by A. Antoniadis," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 6(2), pages 131-138, August.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Canhong Wen & Xueqin Wang & Shaoli Wang, 2015. "Laplace Error Penalty-based Variable Selection in High Dimension," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 42(3), pages 685-700, September.
    2. Benjamin Poignard, 2020. "Asymptotic theory of the adaptive Sparse Group Lasso," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 72(1), pages 297-328, February.
    3. A. Karagrigoriou & C. Koukouvinos & K. Mylona, 2010. "On the advantages of the non-concave penalized likelihood model selection method with minimum prediction errors in large-scale medical studies," Journal of Applied Statistics, Taylor & Francis Journals, vol. 37(1), pages 13-24.
    4. Xingwei Tong & Xin He & Liuquan Sun & Jianguo Sun, 2009. "Variable Selection for Panel Count Data via Non‐Concave Penalized Estimating Function," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 36(4), pages 620-635, December.
    5. Ertefaie Ashkan & Asgharian Masoud & Stephens David A., 2018. "Variable Selection in Causal Inference using a Simultaneous Penalization Method," Journal of Causal Inference, De Gruyter, vol. 6(1), pages 1-16, March.
    6. Jianqing Fan & Jinchi Lv, 2010. "Comments on: ℓ 1 -penalization for mixture regression models," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 19(2), pages 264-269, August.
    7. Chalise, Prabhakar & Fridley, Brooke L., 2012. "Comparison of penalty functions for sparse canonical correlation analysis," Computational Statistics & Data Analysis, Elsevier, vol. 56(2), pages 245-254.
    8. Abhik Ghosh & Magne Thoresen, 2018. "Non-concave penalization in linear mixed-effect models and regularized selection of fixed effects," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 102(2), pages 179-210, April.
    9. Gao, Yan & Zhang, Xinyu & Wang, Shouyang & Zou, Guohua, 2016. "Model averaging based on leave-subject-out cross-validation," Journal of Econometrics, Elsevier, vol. 192(1), pages 139-151.
    10. Zhang, Ting, 2015. "Semiparametric model building for regression models with time-varying parameters," Journal of Econometrics, Elsevier, vol. 187(1), pages 189-200.
    11. Jianbo Li & Yuan Li & Riquan Zhang, 2017. "B spline variable selection for the single index models," Statistical Papers, Springer, vol. 58(3), pages 691-706, September.
    12. Li, Jianbo & Gu, Minggao, 2012. "Adaptive LASSO for general transformation models with right censored data," Computational Statistics & Data Analysis, Elsevier, vol. 56(8), pages 2583-2597.
    13. Li, Jianbo & Gu, Minggao & Zhang, Riquan, 2013. "Variable selection for general transformation models with right censored data via nonconcave penalties," Journal of Multivariate Analysis, Elsevier, vol. 115(C), pages 445-456.
    14. Jianqing Fan & Yuan Liao & Han Liu, 2016. "An overview of the estimation of large covariance and precision matrices," Econometrics Journal, Royal Economic Society, vol. 19(1), pages 1-32, February.
    15. Lee, Youngjo & Oh, Hee-Seok, 2014. "A new sparse variable selection via random-effect model," Journal of Multivariate Analysis, Elsevier, vol. 125(C), pages 89-99.
    16. Tutz, Gerhard & Pößnecker, Wolfgang & Uhlmann, Lorenz, 2015. "Variable selection in general multinomial logit models," Computational Statistics & Data Analysis, Elsevier, vol. 82(C), pages 207-222.
    17. Margherita Giuzio, 2017. "Genetic algorithm versus classical methods in sparse index tracking," Decisions in Economics and Finance, Springer;Associazione per la Matematica, vol. 40(1), pages 243-256, November.
    18. Xu, Yang & Zhao, Shishun & Hu, Tao & Sun, Jianguo, 2021. "Variable selection for generalized odds rate mixture cure models with interval-censored failure time data," Computational Statistics & Data Analysis, Elsevier, vol. 156(C).
    19. Ni, Xiao & Zhang, Hao Helen & Zhang, Daowen, 2009. "Automatic model selection for partially linear models," Journal of Multivariate Analysis, Elsevier, vol. 100(9), pages 2100-2111, October.
    20. Peng, Heng & Lu, Ying, 2012. "Model selection in linear mixed effect models," Journal of Multivariate Analysis, Elsevier, vol. 109(C), pages 109-129.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:taf:japsta:v:37:y:2010:i:8:p:1399-1406. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Chris Longhurst (email available below). General contact details of provider: http://www.tandfonline.com/CJAS20 .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.