IDEAS home Printed from https://ideas.repec.org/a/spr/scient/v117y2018i1d10.1007_s11192-018-2841-4.html
   My bibliography  Save this article

Overlapping thematic structures extraction with mixed-membership stochastic blockmodel

Author

Listed:
  • Shuo Xu

    (Beijing University of Technology
    Jilin University)

  • Junwan Liu

    (Beijing University of Technology)

  • Dongsheng Zhai

    (Beijing University of Technology)

  • Xin An

    (Beijing Forestry University)

  • Zheng Wang

    (Institute of Scientific and Technical Information of China)

  • Hongshen Pang

    (Shenzhen University)

Abstract

It is increasing important to identify automatically thematic structures from massive scientific literature. The interdisciplinarity enables thematic structures without natural boundaries. In this work, the identification of thematic structures is regarded as an overlapping community detection problem from the large-scale citation-link network. A mixed-membership stochastic blockmodel, armed with stochastic variational inference algorithm, is utilized to detect the overlapping thematic structures. In the meanwhile, in order to enhance readability, each theme is labeled with soft mutual information based method by several topical terms. Extensive experimental results on the astro dataset indicate that mixed-membership stochastic blockmodel primarily uses the local information and allows for the pervasive overlaps, but it favors similar sized themes, which disqualifies this approach from being used to extract the thematic structures from scientific literature. In addition, the thematic structures from the bibliographic coupling network is similar to those from the co-citation network.

Suggested Citation

  • Shuo Xu & Junwan Liu & Dongsheng Zhai & Xin An & Zheng Wang & Hongshen Pang, 2018. "Overlapping thematic structures extraction with mixed-membership stochastic blockmodel," Scientometrics, Springer;Akadémiai Kiadó, vol. 117(1), pages 61-84, October.
  • Handle: RePEc:spr:scient:v:117:y:2018:i:1:d:10.1007_s11192-018-2841-4
    DOI: 10.1007/s11192-018-2841-4
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s11192-018-2841-4
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s11192-018-2841-4?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Richard Klavans & Kevin W. Boyack, 2011. "Using global mapping to create more accurate document-level maps of research fields," Journal of the Association for Information Science & Technology, Association for Information Science & Technology, vol. 62(1), pages 1-18, January.
    2. Frank Havemann & Jochen Gläser & Michael Heinz & Alexander Struck, 2012. "Identifying Overlapping and Hierarchical Thematic Structures in Networks of Scholarly Papers: A Comparison of Three Approaches," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-12, March.
    3. Ludo Waltman & Nees Jan Eck, 2012. "A new methodology for constructing a publication-level classification system of science," Journal of the Association for Information Science & Technology, Association for Information Science & Technology, vol. 63(12), pages 2378-2392, December.
    4. Wolfgang Glänzel & Bart Thijs, 2017. "Using hybrid methods and ‘core documents’ for the representation of clusters and topics: the astronomy dataset," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1071-1087, May.
    5. Kevin W. Boyack, 2017. "Thesaurus-based methods for mapping contents of publication sets," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1141-1155, May.
    6. Jochen Gläser & Wolfgang Glänzel & Andrea Scharnhorst, 2017. "Same data—different results? Towards a comparative approach to the identification of thematic structures in science," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 981-998, May.
    7. van Eck, N.J.P. & Waltman, L., 2009. "How to Normalize Co-Occurrence Data? An Analysis of Some Well-Known Similarity Measures," ERIM Report Series Research in Management ERS-2009-001-LIS, Erasmus Research Institute of Management (ERIM), ERIM is the joint research institute of the Rotterdam School of Management, Erasmus University and the Erasmus School of Economics (ESE) at Erasmus University Rotterdam.
    8. Theresa Velden & Kevin W. Boyack & Jochen Gläser & Rob Koopman & Andrea Scharnhorst & Shenghui Wang, 2017. "Comparison of topic extraction approaches and their results," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1169-1221, May.
    9. Nees Jan Eck & Ludo Waltman, 2017. "Citation-based clustering of publications using CitNetExplorer and VOSviewer," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1053-1070, May.
    10. Nees Jan Eck & Ludo Waltman, 2010. "Software survey: VOSviewer, a computer program for bibliometric mapping," Scientometrics, Springer;Akadémiai Kiadó, vol. 84(2), pages 523-538, August.
    11. Healey, Peter & Rothman, Harry & Hoch, Paul K., 1986. "An experiment in science mapping for research planning," Research Policy, Elsevier, vol. 15(5), pages 233-251, October.
    12. Ludo Waltman & Nees Jan van Eck, 2012. "A new methodology for constructing a publication‐level classification system of science," Journal of the American Society for Information Science and Technology, Association for Information Science & Technology, vol. 63(12), pages 2378-2392, December.
    13. Chyi-Kwei Yau & Alan Porter & Nils Newman & Arho Suominen, 2014. "Clustering scientific documents with topic modeling," Scientometrics, Springer;Akadémiai Kiadó, vol. 100(3), pages 767-786, September.
    14. Richard Klavans & Kevin W. Boyack, 2011. "Using global mapping to create more accurate document‐level maps of research fields," Journal of the American Society for Information Science and Technology, Association for Information Science & Technology, vol. 62(1), pages 1-18, January.
    15. Michel Zitt & Suzy Ramanana-Rahary & Elise Bassecoulard, 2005. "Relativity of citation performance and excellence measures: From cross-field to cross-scale effects of field-normalisation," Scientometrics, Springer;Akadémiai Kiadó, vol. 63(2), pages 373-401, April.
    16. Frizo Janssens & Wolfgang Glänzel & Bart Moor, 2008. "A hybrid mapping of information science," Scientometrics, Springer;Akadémiai Kiadó, vol. 75(3), pages 607-631, June.
    17. Frank Havemann & Jochen Gläser & Michael Heinz, 2017. "Memetic search for overlapping topics based on a local evaluation of link communities," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1089-1118, May.
    18. Rob Koopman & Shenghui Wang, 2017. "Mutual information based labelling and comparing clusters," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1157-1167, May.
    19. Leydesdorff, Loet & Welbers, Kasper, 2011. "The semantic mapping of words and co-words in contexts," Journal of Informetrics, Elsevier, vol. 5(3), pages 469-475.
    20. Nees Jan van Eck & Ludo Waltman, 2009. "How to normalize cooccurrence data? An analysis of some well‐known similarity measures," Journal of the American Society for Information Science and Technology, Association for Information Science & Technology, vol. 60(8), pages 1635-1651, August.
    21. Naoki Shibata & Yuya Kajikawa & Yoshiyuki Takeda & Katsumori Matsushima, 2009. "Comparative study on methods of detecting research fronts using different types of citation," Journal of the American Society for Information Science and Technology, Association for Information Science & Technology, vol. 60(3), pages 571-580, March.
    22. Paul Ginsparg, 2011. "ArXiv at 20," Nature, Nature, vol. 476(7359), pages 145-147, August.
    23. Wolfgang Glänzel & Bart Thijs, 2011. "Using ‘core documents’ for the representation of clusters and topics," Scientometrics, Springer;Akadémiai Kiadó, vol. 88(1), pages 297-309, July.
    24. Ahlgren, Per & Colliander, Cristian, 2009. "Document–document similarity approaches and science mapping: Experimental comparison of five approaches," Journal of Informetrics, Elsevier, vol. 3(1), pages 49-63.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Shuo Xu & Mengjia An & Xin An, 2021. "Do scientific publications by editorial board members have shorter publication delays and then higher influence?," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(8), pages 6697-6713, August.
    2. Shuo Xu & Liyuan Hao & Xin An & Dongsheng Zhai & Hongshen Pang, 2019. "Types of DOI errors of cited references in Web of Science with a cleaning method," Scientometrics, Springer;Akadémiai Kiadó, vol. 120(3), pages 1427-1437, September.
    3. Xu, Haiyun & Winnink, Jos & Yue, Zenghui & Zhang, Huiling & Pang, Hongshen, 2021. "Multidimensional Scientometric indicators for the detection of emerging research topics," Technological Forecasting and Social Change, Elsevier, vol. 163(C).
    4. Xu, Shuo & Hao, Liyuan & An, Xin & Yang, Guancan & Wang, Feifei, 2019. "Emerging research topics detection with multiple machine learning models," Journal of Informetrics, Elsevier, vol. 13(4).
    5. Shuo Xu & Ling Li & Xin An & Liyuan Hao & Guancan Yang, 2021. "An approach for detecting the commonality and specialty between scientific publications and patents," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(9), pages 7445-7475, September.
    6. An, Xin & Li, Jinghong & Xu, Shuo & Chen, Liang & Sun, Wei, 2021. "An improved patent similarity measurement based on entities and semantic relations," Journal of Informetrics, Elsevier, vol. 15(2).
    7. Xu, Shuo & Hao, Liyuan & Yang, Guancan & Lu, Kun & An, Xin, 2021. "A topic models based framework for detecting and forecasting emerging technologies," Technological Forecasting and Social Change, Elsevier, vol. 162(C).
    8. Paul Donner, 2021. "Validation of the Astro dataset clustering solutions with external data," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(2), pages 1619-1645, February.
    9. Wang, Feifei & Jia, Chenran & Wang, Xiaohan & Liu, Junwan & Xu, Shuo & Liu, Yang & Yang, Chenyuyan, 2019. "Exploring all-author tripartite citation networks: A case study of gene editing," Journal of Informetrics, Elsevier, vol. 13(3), pages 856-873.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Jochen Gläser & Wolfgang Glänzel & Andrea Scharnhorst, 2017. "Same data—different results? Towards a comparative approach to the identification of thematic structures in science," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 981-998, May.
    2. Matthias Held & Grit Laudel & Jochen Gläser, 2021. "Challenges to the validity of topic reconstruction," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(5), pages 4511-4536, May.
    3. Frank Havemann & Jochen Gläser & Michael Heinz, 2017. "Memetic search for overlapping topics based on a local evaluation of link communities," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1089-1118, May.
    4. Theresa Velden & Kevin W. Boyack & Jochen Gläser & Rob Koopman & Andrea Scharnhorst & Shenghui Wang, 2017. "Comparison of topic extraction approaches and their results," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1169-1221, May.
    5. Sjögårde, Peter & Ahlgren, Per, 2018. "Granularity of algorithmically constructed publication-level classifications of research publications: Identification of topics," Journal of Informetrics, Elsevier, vol. 12(1), pages 133-152.
    6. Jianhua Hou & Xiucai Yang & Chaomei Chen, 2018. "Emerging trends and new developments in information science: a document co-citation analysis (2009–2016)," Scientometrics, Springer;Akadémiai Kiadó, vol. 115(2), pages 869-892, May.
    7. Rons, Nadine, 2018. "Bibliometric approximation of a scientific specialty by combining key sources, title words, authors and references," Journal of Informetrics, Elsevier, vol. 12(1), pages 113-132.
    8. Rob Koopman & Shenghui Wang & Andrea Scharnhorst, 2017. "Contextualization of topics: browsing through the universe of bibliographic information," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1119-1139, May.
    9. Kevin W. Boyack, 2017. "Investigating the effect of global data on topic detection," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 999-1015, May.
    10. Paola Bernardi & Alberto Bertello & Canio Forliano & Ludovico Bullini Orlandi, 2022. "Beyond the “ivory tower”. Comparing academic and non-academic knowledge on social entrepreneurship," International Entrepreneurship and Management Journal, Springer, vol. 18(3), pages 999-1032, September.
    11. María Pinto & Rosaura Fernández-Pascual & David Caballero-Mariscal & Dora Sales, 2020. "Information literacy trends in higher education (2006–2019): visualizing the emerging field of mobile information literacy," Scientometrics, Springer;Akadémiai Kiadó, vol. 124(2), pages 1479-1510, August.
    12. Michel Zitt, 2015. "Meso-level retrieval: IR-bibliometrics interplay and hybrid citation-words methods in scientific fields delineation," Scientometrics, Springer;Akadémiai Kiadó, vol. 102(3), pages 2223-2245, March.
    13. Emilio Abad-Segura & Alfonso Infante-Moro & Mariana-Daniela González-Zamar & Eloy López-Meneses, 2021. "Blockchain Technology for Secure Accounting Management: Research Trends Analysis," Mathematics, MDPI, vol. 9(14), pages 1-26, July.
    14. Takano, Yasutomo & Kajikawa, Yuya, 2019. "Extracting commercialization opportunities of the Internet of Things: Measuring text similarity between papers and patents," Technological Forecasting and Social Change, Elsevier, vol. 138(C), pages 45-68.
    15. Christian Weismayer & Ilona Pezenka, 2017. "Identifying emerging research fields: a longitudinal latent semantic keyword analysis," Scientometrics, Springer;Akadémiai Kiadó, vol. 113(3), pages 1757-1785, December.
    16. Yang, Siluo & Han, Ruizhen & Wolfram, Dietmar & Zhao, Yuehua, 2016. "Visualizing the intellectual structure of information science (2006–2015): Introducing author keyword coupling analysis," Journal of Informetrics, Elsevier, vol. 10(1), pages 132-150.
    17. Tomasz Ingram & Monika Wieczorek-Kosmala & Karel Hlaváček, 2023. "Organizational Resilience as a Response to the Energy Crisis: Systematic Literature Review," Energies, MDPI, vol. 16(2), pages 1-35, January.
    18. Theresa Velden & Shiyan Yan & Carl Lagoze, 2017. "Mapping the cognitive structure of astrophysics by infomap clustering of the citation network and topic affinity analysis," Scientometrics, Springer;Akadémiai Kiadó, vol. 111(2), pages 1033-1051, May.
    19. Juan Pablo Bascur & Suzan Verberne & Nees Jan Eck & Ludo Waltman, 2023. "Academic information retrieval using citation clusters: in-depth evaluation based on systematic reviews," Scientometrics, Springer;Akadémiai Kiadó, vol. 128(5), pages 2895-2921, May.
    20. Paul Donner, 2021. "Validation of the Astro dataset clustering solutions with external data," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(2), pages 1619-1645, February.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:scient:v:117:y:2018:i:1:d:10.1007_s11192-018-2841-4. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.