IDEAS home Printed from https://ideas.repec.org/a/spr/compst/v34y2019i2d10.1007_s00180-018-0842-7.html
   My bibliography  Save this article

fdANOVA: an R software package for analysis of variance for univariate and multivariate functional data

Author

Listed:
  • Tomasz Górecki

    (Adam Mickiewicz University)

  • Łukasz Smaga

    (Adam Mickiewicz University)

Abstract

Functional data, i.e., observations represented by curves or functions, frequently arise in various fields. The theory and practice of statistical methods for such data is referred to as functional data analysis (FDA) which is one of major research fields in statistics. The practical use of FDA methods is made possible thanks to availability of specialized and usually free software. In particular, a number of R packages is devoted to these methods. In the paper, we introduce a new R package fdANOVA which provides an access to a broad range of global analysis of variance methods for univariate and multivariate functional data. The implemented testing procedures mainly for homoscedastic case are briefly overviewed and illustrated by examples on a well known functional data set. To reduce the computation time, parallel implementation is developed and its efficiency is empirically evaluated. Since some of the implemented tests have not been compared in terms of size control and power yet, appropriate simulations are also conducted. Their results can help in choosing proper testing procedures in practice.

Suggested Citation

  • Tomasz Górecki & Łukasz Smaga, 2019. "fdANOVA: an R software package for analysis of variance for univariate and multivariate functional data," Computational Statistics, Springer, vol. 34(2), pages 571-597, June.
    • Handle: RePEc:spr:compst:v:34:y:2019:i:2:d:10.1007_s00180-018-0842-7
    DOI: 10.1007/s00180-018-0842-7
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s00180-018-0842-7
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.
    File URL: https://libkey.io/10.1007/s00180-018-0842-7?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Jin-Ting Zhang & Xuehua Liang, 2014. "One-Way anova for Functional Data via Globalizing the Pointwise F-test," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 41(1), pages 51-71, March.
    2. Febrero-Bande, Manuel & de la Fuente, Manuel Oviedo, 2012. "Statistical Computing in Functional Data Analysis: The R Package fda.usc," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 51(i04).
    3. Markus Pauly & Edgar Brunner & Frank Konietschke, 2015. "Asymptotic permutation tests in general factorial designs," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 77(2), pages 461-473, March.
    4. Paweł Teisseyre & Robert A. Kłopotek & Jan Mielniczuk, 2016. "Random Subspace Method for high-dimensional regression with the R package regRSM," Computational Statistics, Springer, vol. 31(3), pages 943-972, September.
    5. Tomasz Górecki & Łukasz Smaga, 2015. "A comparison of tests for the one-way ANOVA problem for functional data," Computational Statistics, Springer, vol. 30(4), pages 987-1010, December.
    6. Schmidberger, Markus & Morgan, Martin & Eddelbuettel, Dirk & Yu, Hao & Tierney, Luke & Mansmann, Ulrich, 2009. "State of the Art in Parallel Computing with R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 31(i01).
    7. Cuevas, Antonio & Febrero, Manuel & Fraiman, Ricardo, 2004. "An anova test for functional data," Computational Statistics & Data Analysis, Elsevier, vol. 47(1), pages 111-122, August.
    8. J. Cuesta-Albertos & M. Febrero-Bande, 2010. "A simple multiway ANOVA for functional data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 19(3), pages 537-557, November.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Huang, Wei-Hsueh & Huang, Li-Shan & Yang, Cheng-Tao, 2022. "Invariant tests for functional data with application to an earthquake impact study," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    2. Hlávka, Zdeněk & Hlubinka, Daniel & Koňasová, Kateřina, 2022. "Functional ANOVA based on empirical characteristic functionals," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    3. Boudreault, Jeremie & Bergeron, Normand E & St-Hilaire, Andre & Chebana, Fateh, 2022. "A new look at habitat suitability curves through functional data analysis," Ecological Modelling, Elsevier, vol. 467(C).
    4. Germán Aneiros & Ricardo Cao & Philippe Vieu, 2019. "Editorial on the special issue on Functional Data Analysis and Related Topics," Computational Statistics, Springer, vol. 34(2), pages 447-450, June.
    5. Jiménez-Gamero, M. Dolores & Franco-Pereira, Alba M., 2021. "Testing the equality of a large number of means of functional data," Journal of Multivariate Analysis, Elsevier, vol. 185(C).
    6. Balogoun, Armando Sosthène Kali & Nkiet, Guy Martial & Ogouyandjou, Carlos, 2021. "Asymptotic normality of a generalized maximum mean discrepancy estimator," Statistics & Probability Letters, Elsevier, vol. 169(C).
    7. Ofélia Anjos & Miguel Martínez Comesaña & Ilda Caldeira & Soraia Inês Pedro & Pablo Eguía Oller & Sara Canas, 2020. "Application of Functional Data Analysis and FTIR-ATR Spectroscopy to Discriminate Wine Spirits Ageing Technologies," Mathematics, MDPI, vol. 8(6), pages 1-21, June.
    8. Rafael Meléndez & Ramón Giraldo & Víctor Leiva, 2020. "Sign, Wilcoxon and Mann-Whitney Tests for Functional Data: An Approach Based on Random Projections," Mathematics, MDPI, vol. 9(1), pages 1-11, December.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Balogoun, Armando Sosthène Kali & Nkiet, Guy Martial & Ogouyandjou, Carlos, 2021. "Asymptotic normality of a generalized maximum mean discrepancy estimator," Statistics & Probability Letters, Elsevier, vol. 169(C).
    2. Qiu, Zhiping & Chen, Jianwei & Zhang, Jin-Ting, 2021. "Two-sample tests for multivariate functional data with applications," Computational Statistics & Data Analysis, Elsevier, vol. 157(C).
    3. Hlávka, Zdeněk & Hlubinka, Daniel & Koňasová, Kateřina, 2022. "Functional ANOVA based on empirical characteristic functionals," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    4. Pini, Alessia & Sørensen, Helle & Tolver, Anders & Vantini, Simone, 2023. "Local inference for functional linear mixed models," Computational Statistics & Data Analysis, Elsevier, vol. 181(C).
    5. Ana Debón & Steven Haberman & Francisco Montes & Edoardo Otranto, 2021. "Do Different Models Induce Changes in Mortality Indicators? That Is a Key Question for Extending the Lee-Carter Model," IJERPH, MDPI, vol. 18(4), pages 1-16, February.
    6. T. Górecki & Ł. Smaga, 2017. "Multivariate analysis of variance for functional data," Journal of Applied Statistics, Taylor & Francis Journals, vol. 44(12), pages 2172-2189, September.
    7. Jia Guo & Bu Zhou & Jianwei Chen & Jin-Ting Zhang, 2019. "An $${{\varvec{L}}}^{2}$$L2-norm-based test for equality of several covariance functions: a further study," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(4), pages 1092-1112, December.
    8. Łukasz Smaga, 2020. "A note on repeated measures analysis for functional data," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 104(1), pages 117-139, March.
    9. Jiménez-Gamero, M. Dolores & Franco-Pereira, Alba M., 2021. "Testing the equality of a large number of means of functional data," Journal of Multivariate Analysis, Elsevier, vol. 185(C).
    10. Christian Acal & Ana M. Aguilera, 2023. "Basis expansion approaches for functional analysis of variance with repeated measures," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 17(2), pages 291-321, June.
    11. Huang, Wei-Hsueh & Huang, Li-Shan & Yang, Cheng-Tao, 2022. "Invariant tests for functional data with application to an earthquake impact study," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    12. Rafael Meléndez & Ramón Giraldo & Víctor Leiva, 2020. "Sign, Wilcoxon and Mann-Whitney Tests for Functional Data: An Approach Based on Random Projections," Mathematics, MDPI, vol. 9(1), pages 1-11, December.
    13. Łukasz Smaga & Hidetoshi Matsui, 2018. "A note on variable selection in functional regression via random subspace method," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 27(3), pages 455-477, August.
    14. Zhang, Jin-Ting & Cheng, Ming-Yen & Wu, Hau-Tieng & Zhou, Bu, 2019. "A new test for functional one-way ANOVA with applications to ischemic heart screening," Computational Statistics & Data Analysis, Elsevier, vol. 132(C), pages 3-17.
    15. A. Debòn & S. Haberman & F. Montes & E. Otranto, 2012. "Model effect on projected mortality indicators," Working Paper CRENoS 201215, Centre for North South Economic Research, University of Cagliari and Sassari, Sardinia.
    16. Kraus, David, 2019. "Inferential procedures for partially observed functional data," Journal of Multivariate Analysis, Elsevier, vol. 173(C), pages 583-603.
    17. Jiang, Qing & Hušková, Marie & Meintanis, Simos G. & Zhu, Lixing, 2019. "Asymptotics, finite-sample comparisons and applications for two-sample tests with functional data," Journal of Multivariate Analysis, Elsevier, vol. 170(C), pages 202-220.
    18. Xiaoqi Jiang & Steven Wink & Bob van de Water & Annette Kopp-Schneider, 2017. "Functional analysis of high-content high-throughput imaging data," Journal of Applied Statistics, Taylor & Francis Journals, vol. 44(11), pages 1903-1919, August.
    19. Tao Zhang & Zhiwen Wang & Yanling Wan, 2021. "Functional test for high-dimensional covariance matrix, with application to mitochondrial calcium concentration," Statistical Papers, Springer, vol. 62(3), pages 1213-1230, June.
    20. Pini, Alessia & Stamm, Aymeric & Vantini, Simone, 2018. "Hotelling’s T2 in separable Hilbert spaces," Journal of Multivariate Analysis, Elsevier, vol. 167(C), pages 284-305.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:compst:v:34:y:2019:i:2:d:10.1007_s00180-018-0842-7. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.