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Assessing the predictive value of morphological traits on primary lifestyle of birds through the extreme gradient boosting algorithm

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  • Luis Javier Madrigal-Roca

Abstract

The relationship between morphological traits and ecological performance in birds is an important area of research, as it can help us to understand how birds are able to adapt and how they are affected by changes in their environment. Many studies have investigated the relationship between morphological traits and certain aspects of the performance and ecological niche of these animals. However, the relationship between morphological traits and the primary lifestyle of birds has not previously been explored. This paper aims to evaluate the predictive potential of morphological data to determine the primary lifestyle of birds through a tree-based machine learning algorithm. By doing this, it is also possible to evaluate these artificial categories that we used to split up birds and know whether they are suitable for dividing them in function of shared morphological characteristics or need a redefinition under more discriminant criteria. Supplementary dataset 1 of the AVONET project was used, which comprises the 11 morphological predictors used in this work and the classification according to the primary lifestyle for more than 95% of the existing bird species. For all morphological traits used, statistically significant univariate differences were found between primary lifestyles. The three fitted machine learning models showed high accuracy, in all cases above 78% and superior to the ones achieved through traditional approaches used as contrasts. The results obtained provide evidence that primary lifestyle can be predicted in birds based on morphological traits, as well as more insights about the relevance of functional traits for ecological modeling. This is another step forward in our mechanistic understanding of bird ecology, while exploring how birds have adapted to their environments and how they interact with their surroundings.

Suggested Citation

  • Luis Javier Madrigal-Roca, 2024. "Assessing the predictive value of morphological traits on primary lifestyle of birds through the extreme gradient boosting algorithm," PLOS ONE, Public Library of Science, vol. 19(1), pages 1-18, January.
  • Handle: RePEc:plo:pone00:0295182
    DOI: 10.1371/journal.pone.0295182
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    1. Kuhn, Max, 2008. "Building Predictive Models in R Using the caret Package," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 28(i05).
    2. Hothorn, Torsten & Hornik, Kurt & van de Wiel, Mark A. & Zeileis, Achim, 2006. "A Lego System for Conditional Inference," The American Statistician, American Statistical Association, vol. 60, pages 257-263, August.
    3. Loïc Chalmandrier & Florian Hartig & Daniel C. Laughlin & Heike Lischke & Maximilian Pichler & Daniel B. Stouffer & Loïc Pellissier, 2021. "Linking functional traits and demography to model species-rich communities," Nature Communications, Nature, vol. 12(1), pages 1-9, December.
    4. Catherine Sheard & Montague H. C. Neate-Clegg & Nico Alioravainen & Samuel E. I. Jones & Claire Vincent & Hannah E. A. MacGregor & Tom P. Bregman & Santiago Claramunt & Joseph A. Tobias, 2020. "Ecological drivers of global gradients in avian dispersal inferred from wing morphology," Nature Communications, Nature, vol. 11(1), pages 1-9, December.
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