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Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

Author

Listed:
  • Willm Martens-Habbena

    (University of Washington, Seattle, Washington 98105, USA)

  • Paul M. Berube

    (University of Washington, Seattle, Washington 98105, USA
    Present addresses: Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA (P.M.B.); Department of Biology, San Francisco State University, San Francisco, California 94132, USA (J.R.T).)

  • Hidetoshi Urakawa

    (University of Washington, Seattle, Washington 98105, USA)

  • José R. de la Torre

    (University of Washington, Seattle, Washington 98105, USA
    Present addresses: Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA (P.M.B.); Department of Biology, San Francisco State University, San Francisco, California 94132, USA (J.R.T).)

  • David A. Stahl

    (University of Washington, Seattle, Washington 98105, USA)

Abstract

Ammonia for Archaea Aerobic ammonia oxidation is a key process in the global nitrogen cycle. It was thought that only a few groups of bacteria could catalyse the reaction, until a few years ago when widely distributed Archaea species were found to do the same. Now a study of the marine archaeal isolate known as SCM1 reveals that it has a much higher affinity for ammonia than bacterial ammonia oxidizers. This would explain why marine Archaea can successfully compete with other microbes in the oligotrophic ocean, and it supports the hypothesis that nitrification may be more prevalent in the marine nitrogen cycle than assumed in current biogeochemical models.

Suggested Citation

  • Willm Martens-Habbena & Paul M. Berube & Hidetoshi Urakawa & José R. de la Torre & David A. Stahl, 2009. "Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria," Nature, Nature, vol. 461(7266), pages 976-979, October.
    • Handle: RePEc:nat:nature:v:461:y:2009:i:7266:d:10.1038_nature08465
    DOI: 10.1038/nature08465
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    Cited by:

    1. Jingyi Dong & Liming Tian & Jiaqi Zhang & Yinghui Liu & Haiyan Li & Qi Dong, 2022. "Grazing Intensity Has More Effect on the Potential Nitrification Activity Than the Potential Denitrification Activity in An Alpine Meadow," Agriculture, MDPI, vol. 12(10), pages 1-17, September.
    2. Jianfeng Ning & Yuji Arai & Jian Shen & Ronghui Wang & Shaoying Ai, 2021. "Effects of Phosphorus on Nitrification Process in a Fertile Soil Amended with Urea," Agriculture, MDPI, vol. 11(6), pages 1-12, June.
    3. Nagendranatha Reddy, C. & Venkata Mohan, S., 2016. "Integrated bio-electrogenic process for bioelectricity production and cathodic nutrient recovery from azo dye wastewater," Renewable Energy, Elsevier, vol. 98(C), pages 188-196.
    4. Lin, L. & Norman, J.S. & Barrett, J.E., 2017. "Ammonia-uptake kinetics and domain-level contributions of bacteria and archaea to nitrification in temperate forest soils," Ecological Modelling, Elsevier, vol. 362(C), pages 111-119.
    5. Zhen-Zhen Zheng & Li-Wei Zheng & Min Nina Xu & Ehui Tan & David A. Hutchins & Wenchao Deng & Yao Zhang & Dalin Shi & Minhan Dai & Shuh-Ji Kao, 2020. "Substrate regulation leads to differential responses of microbial ammonia-oxidizing communities to ocean warming," Nature Communications, Nature, vol. 11(1), pages 1-10, December.
    6. Jie Zhou & Yanling Zheng & Lijun Hou & Zhirui An & Feiyang Chen & Bolin Liu & Li Wu & Lin Qi & Hongpo Dong & Ping Han & Guoyu Yin & Xia Liang & Yi Yang & Xiaofei Li & Dengzhou Gao & Ye Li & Zhanfei Li, 2023. "Effects of acidification on nitrification and associated nitrous oxide emission in estuarine and coastal waters," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    7. Sharif Hossain & Christopher W. K. Chow & David Cook & Emma Sawade & Guna A. Hewa, 2022. "Review of Nitrification Monitoring and Control Strategies in Drinking Water System," IJERPH, MDPI, vol. 19(7), pages 1-31, March.

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