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A pair of readers of histone H3K4 methylation recruit Polycomb repressive complex 2 to regulate photoperiodic flowering

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Listed:
  • Xiao Luo

    (Shandong Laboratory of Advanced Agricultural Sciences in Weifang
    Chinese Academy of Sciences (CAS)
    Shandong Agricultural University)

  • Xueqin Li

    (Chinese Academy of Sciences (CAS))

  • Zhijuan Chen

    (Chinese Academy of Sciences (CAS))

  • Shu Tian

    (Peking University)

  • Yajie Liu

    (Chinese Academy of Sciences (CAS))

  • Zhiyun Shang

    (Peking University)

  • Lixian Chen

    (Chinese Academy of Sciences (CAS)
    University of the Chinese Academy of Sciences)

  • Yu Sun

    (Shandong Laboratory of Advanced Agricultural Sciences in Weifang)

  • Jiamu Du

    (Southern University of Science and Technology)

  • Yuehui He

    (Shandong Laboratory of Advanced Agricultural Sciences in Weifang
    Chinese Academy of Sciences (CAS)
    Peking University)

Abstract

The transition from vegetative growth to reproduction in flowering plants is often timed by seasonal changes in day length (photoperiod). In the long-day (LD) plant Arabidopsis thaliana, the photoperiod pathway induces a daily rhythmic activation of the florigen gene FLOWERING LOCUS T (FT) to promote the floral transition. Under inductive LDs, FT expression is activated around dusk, but to be repressed overnight and into the early afternoon the next day. Here, we report that AtING1 and AtING2, Arabidopsis homologs of the mammalian Inhibitor of Growth (ING) proteins, read di- and tri-methylated histone-3 lysine 4 (H3K4me2/me3) on FT chromatin and further recruit Polycomb-repressive complex 2 (PRC2) to repress FT expression at night and into the early afternoon the next day, following FT activation at dusk. This prevents precocious flowering under inductive LDs. Our study reveals that the H3K4me2/me3-ING1/2-PRC2 module timely represses FT expression following the daily rhythmic FT activation, to prevent excessive FT expression and thus precisely control flowering time, in response to inductive photoperiodic signals.

Suggested Citation

  • Xiao Luo & Xueqin Li & Zhijuan Chen & Shu Tian & Yajie Liu & Zhiyun Shang & Lixian Chen & Yu Sun & Jiamu Du & Yuehui He, 2025. "A pair of readers of histone H3K4 methylation recruit Polycomb repressive complex 2 to regulate photoperiodic flowering," Nature Communications, Nature, vol. 16(1), pages 1-16, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-64419-6
    DOI: 10.1038/s41467-025-64419-6
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    References listed on IDEAS

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    1. Liangyu Liu & Jessika Adrian & Artem Pankin & Jinyong Hu & Xue Dong & Maria von Korff & Franziska Turck, 2014. "Induced and natural variation of promoter length modulates the photoperiodic response of FLOWERING LOCUS T," Nature Communications, Nature, vol. 5(1), pages 1-9, December.
    2. Marcelo J. Yanovsky & Steve A. Kay, 2002. "Molecular basis of seasonal time measurement in Arabidopsis," Nature, Nature, vol. 419(6904), pages 308-312, September.
    3. Paula Suárez-López & Kay Wheatley & Frances Robson & Hitoshi Onouchi & Federico Valverde & George Coupland, 2001. "CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis," Nature, Nature, vol. 410(6832), pages 1116-1120, April.
    4. Xiaobing Shi & Tao Hong & Kay L. Walter & Mark Ewalt & Eriko Michishita & Tiffany Hung & Dylan Carney & Pedro Peña & Fei Lan & Mohan R. Kaadige & Nicolas Lacoste & Christelle Cayrou & Foteini Davrazou, 2006. "ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression," Nature, Nature, vol. 442(7098), pages 96-99, July.
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