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Natural variation of STKc_GSK3 kinase TaSG-D1 contributes to heat stress tolerance in Indian dwarf wheat

Author

Listed:
  • Jie Cao

    (China Agricultural University)

  • Zhen Qin

    (China Agricultural University)

  • Guangxian Cui

    (China Agricultural University)

  • Zhaoyan Chen

    (China Agricultural University)

  • Xuejiao Cheng

    (China Agricultural University)

  • Huiru Peng

    (China Agricultural University)

  • Yingyin Yao

    (China Agricultural University)

  • Zhaorong Hu

    (China Agricultural University)

  • Weilong Guo

    (China Agricultural University)

  • Zhongfu Ni

    (China Agricultural University)

  • Qixin Sun

    (China Agricultural University)

  • Mingming Xin

    (China Agricultural University)

Abstract

Heat stress threatens global wheat (Triticum aestivum) production, causing dramatic yield losses worldwide. Identifying heat tolerance genes and comprehending molecular mechanisms are essential. Here, we identify a heat tolerance gene, TaSG-D1E286K, in Indian dwarf wheat (Triticum sphaerococcum), which encodes an STKc_GSK3 kinase. TaSG-D1E286K improves heat tolerance compared to TaSG-D1 by enhancing phosphorylation and stability of downstream target TaPIF4 under heat stress condition. Additionally, we reveal evolutionary footprints of TaPIF4 during wheat selective breeding in China, that is, InDels predominantly occur in the TaPIF4 promoter of Chinese modern wheat cultivars and result in decreased expression level of TaPIF4 in response to heat stress. These sequence variations with negative effect on heat tolerance are mainly introduced from European germplasm. Our study provides insight into heat stress response mechanisms and proposes a potential strategy to improve wheat heat tolerance in future.

Suggested Citation

  • Jie Cao & Zhen Qin & Guangxian Cui & Zhaoyan Chen & Xuejiao Cheng & Huiru Peng & Yingyin Yao & Zhaorong Hu & Weilong Guo & Zhongfu Ni & Qixin Sun & Mingming Xin, 2024. "Natural variation of STKc_GSK3 kinase TaSG-D1 contributes to heat stress tolerance in Indian dwarf wheat," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46419-0
    DOI: 10.1038/s41467-024-46419-0
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    1. Sara Kim & Geonhee Hwang & Soohwan Kim & Thom Nguyen Thi & Hanim Kim & Jinkil Jeong & Jaewook Kim & Jungmook Kim & Giltsu Choi & Eunkyoo Oh, 2020. "The epidermis coordinates thermoresponsive growth through the phyB-PIF4-auxin pathway," Nature Communications, Nature, vol. 11(1), pages 1-13, December.
    2. S. Asseng & F. Ewert & P. Martre & R. P. Rötter & D. B. Lobell & D. Cammarano & B. A. Kimball & M. J. Ottman & G. W. Wall & J. W. White & M. P. Reynolds & P. D. Alderman & P. V. V. Prasad & P. K. Agga, 2015. "Rising temperatures reduce global wheat production," Nature Climate Change, Nature, vol. 5(2), pages 143-147, February.
    3. Miguel de Lucas & Jean-Michel Davière & Mariana Rodríguez-Falcón & Mariela Pontin & Juan Manuel Iglesias-Pedraz & Séverine Lorrain & Christian Fankhauser & Miguel Angel Blázquez & Elena Titarenko & Sa, 2008. "A molecular framework for light and gibberellin control of cell elongation," Nature, Nature, vol. 451(7177), pages 480-484, January.
    4. Weilong Guo & Mingming Xin & Zihao Wang & Yingyin Yao & Zhaorong Hu & Wanjun Song & Kuohai Yu & Yongming Chen & Xiaobo Wang & Panfeng Guan & Rudi Appels & Huiru Peng & Zhongfu Ni & Qixin Sun, 2020. "Origin and adaptation to high altitude of Tibetan semi-wild wheat," Nature Communications, Nature, vol. 11(1), pages 1-12, December.
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