IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-46060-x.html
   My bibliography  Save this article

Enhancing phosphate-solubilising microbial communities through artificial selection

Author

Listed:
  • Lena Faller

    (Droevendaalsesteeg 10
    Utrecht University, Institute of Environmental Biology, Ecology and Biodiversity, Padualaan 8)

  • Marcio F. A. Leite

    (Droevendaalsesteeg 10
    Utrecht University, Institute of Environmental Biology, Ecology and Biodiversity, Padualaan 8)

  • Eiko E. Kuramae

    (Droevendaalsesteeg 10
    Utrecht University, Institute of Environmental Biology, Ecology and Biodiversity, Padualaan 8)

Abstract

Microbial communities, acting as key drivers of ecosystem processes, harbour immense potential for sustainable agriculture practices. Phosphate-solubilising microorganisms, for example, can partially replace conventional phosphate fertilisers, which rely on finite resources. However, understanding the mechanisms and engineering efficient communities poses a significant challenge. In this study, we employ two artificial selection methods, environmental perturbation, and propagation, to construct phosphate-solubilising microbial communities. To assess trait transferability, we investigate the community performance in different media and a hydroponic system with Chrysanthemum indicum. Our findings reveal a distinct subset of phosphate-solubilising bacteria primarily dominated by Klebsiella and Enterobacterales. The propagated communities consistently demonstrate elevated levels of phosphate solubilisation, surpassing the starting soil community by 24.2% in activity. The increased activity of propagated communities remains consistent upon introduction into the hydroponic system. This study shows the efficacy of community-level artificial selection, particularly through propagation, as a tool for successfully modifying microbial communities to enhance phosphate solubilisation.

Suggested Citation

  • Lena Faller & Marcio F. A. Leite & Eiko E. Kuramae, 2024. "Enhancing phosphate-solubilising microbial communities through artificial selection," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46060-x
    DOI: 10.1038/s41467-024-46060-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-46060-x
    File Function: Abstract
    Download Restriction: no
    File URL: https://libkey.io/10.1038/s41467-024-46060-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Epskamp, Sacha & Cramer, Angélique O.J. & Waldorp, Lourens J. & Schmittmann, Verena D. & Borsboom, Denny, 2012. "qgraph: Network Visualizations of Relationships in Psychometric Data," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 48(i04).
    2. Zeileis, Achim, 2006. "Object-oriented Computation of Sandwich Estimators," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 16(i09).
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Georgia Mangion & Melanie Simmonds-Buckley & Stephen Kellett & Peter Taylor & Amy Degnan & Charlotte Humphrey & Kate Freshwater & Marisa Poggioli & Cristina Fiorani, 2022. "Modelling Identity Disturbance: A Network Analysis of the Personality Structure Questionnaire (PSQ)," IJERPH, MDPI, vol. 19(21), pages 1-17, October.
    2. Jiang, Xianfeng & Packer, Frank, 2019. "Credit ratings of Chinese firms by domestic and global agencies: Assessing the determinants and impact," Journal of Banking & Finance, Elsevier, vol. 105(C), pages 178-193.
    3. Sviták, Jan & Tichem, Jan & Haasbeek, Stefan, 2021. "Price effects of search advertising restrictions," International Journal of Industrial Organization, Elsevier, vol. 77(C).
    4. Christopher F. Parmeter, 2018. "Estimation of the two-tiered stochastic frontier model with the scaling property," Journal of Productivity Analysis, Springer, vol. 49(1), pages 37-47, February.
    5. Hasler Mario, 2013. "Multiple Contrasts for Repeated Measures," The International Journal of Biostatistics, De Gruyter, vol. 9(1), pages 1-13, July.
    6. Denny Borsboom, 2022. "Possible Futures for Network Psychometrics," Psychometrika, Springer;The Psychometric Society, vol. 87(1), pages 253-265, March.
    7. Jayawickreme, Nuwan & Mootoo, Candace & Fountain, Christine & Rasmussen, Andrew & Jayawickreme, Eranda & Bertuccio, Rebecca F., 2017. "Post-conflict struggles as networks of problems: A network analysis of trauma, daily stressors and psychological distress among Sri Lankan war survivors," Social Science & Medicine, Elsevier, vol. 190(C), pages 119-132.
    8. Zhou, Jianhua & Zhang, Lulu & Gong, Xue, 2023. "Longitudinal network relations between symptoms of problematic internet game use and internalizing and externalizing problems among Chinese early adolescents," Social Science & Medicine, Elsevier, vol. 333(C).
    9. Vinícius B. P. Chagas & Pedro L. B. Chaffe & Günter Blöschl, 2022. "Climate and land management accelerate the Brazilian water cycle," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    10. Kleiber Christian & Zeileis Achim, 2010. "The Grunfeld Data at 50," German Economic Review, De Gruyter, vol. 11(4), pages 404-417, December.
    11. Erdogan, Murside Rabia & Camgoz, Selin Metin & Karan, Mehmet Baha & Berument, M. Hakan, 2022. "The switching behavior of large-scale electricity consumers in The Turkish electricity retail market," Energy Policy, Elsevier, vol. 160(C).
    12. Lupi, Claudio, 2009. "Unit Root CADF Testing with R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 32(i02).
    13. Yi-Lung Chen & Hsing-Ying Ho & Ray C. Hsiao & Wei-Hsin Lu & Cheng-Fang Yen, 2020. "Correlations between Quality of Life, School Bullying, and Suicide in Adolescents with Attention-Deficit Hyperactivity Disorder," IJERPH, MDPI, vol. 17(9), pages 1-12, May.
    14. Kan, Kees-Jan & van der Maas, Han L.J. & Levine, Stephen Z., 2019. "Extending psychometric network analysis: Empirical evidence against g in favor of mutualism?," Intelligence, Elsevier, vol. 73(C), pages 52-62.
    15. Mireille E. Schnitzer & Erica E.M. Moodie & Mark J. van der Laan & Robert W. Platt & Marina B. Klein, 2014. "Modeling the impact of hepatitis C viral clearance on end-stage liver disease in an HIV co-infected cohort with targeted maximum likelihood estimation," Biometrics, The International Biometric Society, vol. 70(1), pages 144-152, March.
    16. Horváth, Lajos & Rice, Gregory, 2019. "Asymptotics for empirical eigenvalue processes in high-dimensional linear factor models," Journal of Multivariate Analysis, Elsevier, vol. 169(C), pages 138-165.
    17. Wilms, Rafael & Dahan, Clara Seif el, 2022. "Are we on the same page? The moderating role of value congruence in charismatic signaling-charismatic effects relationship," OSF Preprints s5q6d, Center for Open Science.
    18. Don Watson & Manfred Krug & Claus-Christian Carbon, 2022. "The relationship between citations and the linguistic traits of specific academic discourse communities identified by using social network analysis," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(4), pages 1755-1781, April.
    19. Shinsuke Ohnuki & Yoshikazu Ohya, 2018. "High-dimensional single-cell phenotyping reveals extensive haploinsufficiency," PLOS Biology, Public Library of Science, vol. 16(5), pages 1-23, May.
    20. Zeileis, Achim & Koenker, Roger, 2008. "Econometrics in R: Past, Present, and Future," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 27(i01).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46060-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.