IDEAS home Printed from https://ideas.repec.org/a/eee/agiwat/v324y2026ics0378377425007942.html

Research on inversion and prediction of root region soil water content in kiwifruit based on hyperparameter tuning by transformer-DsaGRU

Author

Listed:
  • Li, Xinshuai
  • Chen, Zili
  • He, Jingyuan
  • Liu, Qingyuan
  • Niu, Zhen
  • Gao, Zhilong
  • Jia, Zefeng
  • Niu, Zijie
  • Zhang, Dongyan
  • Zhou, Mingu

Abstract

The fruit expansion period of kiwifruit is highly sensitive to water demand, and the precise monitoring and prediction of root zone soil water content (RSWC) are crucial for ensuring fruit quality and yield. This study develops a Transformer–DsaGRU model that fuses UAV multispectral indices, meteorological variables and a rainfall-threshold-based dynamic step-size adjustment (Dsa) to forecast plant-scale RSWC. Field campaigns were conducted in a kiwifruit orchard in Meixian County, Shaanxi Province, China, over three growing seasons (2023–2025), yielding 3288 plant-day samples from 54 vines. After feature selection via Pearson correlation (p < 0.05) and mutual information, 12 core variables were retained and their contributions quantified using SHAP analysis. With a base input window of 10 days and Dsa-driven extension to 12 days under daily rainfall > 0.2 mm, the Transformer–DsaGRU achieved determination coefficients (R²) of 0.78 and 0.75 and mean absolute errors (MAE) of 1.11 and 1.06 % v/v for 1- and 2-day-ahead RSWC forecasts, respectively, outperforming RNN, LSTM, GRU and TCN baselines. Independent extrapolation using the 2025 data showed that the model maintains acceptable skill across phenological stages, indicating robust generalization to an unseen year. Nevertheless, the present work is constrained by the limited spatial extent of a single orchard, the focus on a specific growth phase, future studies will extend to more sites, phenological phases and soil–crop variables to support wider irrigation applications.

Suggested Citation

  • Li, Xinshuai & Chen, Zili & He, Jingyuan & Liu, Qingyuan & Niu, Zhen & Gao, Zhilong & Jia, Zefeng & Niu, Zijie & Zhang, Dongyan & Zhou, Mingu, 2026. "Research on inversion and prediction of root region soil water content in kiwifruit based on hyperparameter tuning by transformer-DsaGRU," Agricultural Water Management, Elsevier, vol. 324(C).
  • Handle: RePEc:eee:agiwat:v:324:y:2026:i:c:s0378377425007942
    DOI: 10.1016/j.agwat.2025.110080
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0378377425007942
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.agwat.2025.110080?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to

    for a different version of it.

    References listed on IDEAS

    as
    1. Deng, Juntao & Pan, Shijia & Zhou, Mingu & Gao, Wen & Yan, Yuncai & Niu, Zijie & Han, Wenting, 2023. "Optimum sampling window size and vegetation index selection for low-altitude multispectral estimation of root soil moisture content for Xuxiang Kiwifruit," Agricultural Water Management, Elsevier, vol. 282(C).
    2. Zhang, Rui & Bao, Xin & Hong, Ruikai & He, Xu & Yin, Gaofei & Chen, Jie & Ouyang, Xiaoying & Wang, Yongxun & Liu, Guoxiang, 2024. "Soil moisture retrieval over croplands using novel dual-polarization SAR vegetation index," Agricultural Water Management, Elsevier, vol. 306(C).
    3. El-Hendawy, Salah E. & Al-Suhaibani, Nasser A. & Elsayed, Salah & Hassan, Wael M. & Dewir, Yaser Hassan & Refay, Yahya & Abdella, Kamel A., 2019. "Potential of the existing and novel spectral reflectance indices for estimating the leaf water status and grain yield of spring wheat exposed to different irrigation rates," Agricultural Water Management, Elsevier, vol. 217(C), pages 356-373.
    4. Wang, Yue & Zha, Yuanyuan, 2024. "Comparison of transformer, LSTM and coupled algorithms for soil moisture prediction in shallow-groundwater-level areas with interpretability analysis," Agricultural Water Management, Elsevier, vol. 305(C).
    5. Zhu, Shidan & Cui, Ningbo & Jin, Huaan & Jin, Xiuliang & Guo, Li & Jiang, Shouzheng & Wu, Zongjun & Lv, Min & Chen, Fei & Liu, Quanshan & Wang, Mingjun, 2024. "Optimization of multi-dimensional indices for kiwifruit orchard soil moisture content estimation using UAV and ground multi-sensors," Agricultural Water Management, Elsevier, vol. 294(C).
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Zhu, Shidan & Cui, Ningbo & Jin, Huaan & Jin, Xiuliang & Guo, Li & Jiang, Shouzheng & Wu, Zongjun & Lv, Min & Chen, Fei & Liu, Quanshan & Wang, Mingjun, 2024. "Optimization of multi-dimensional indices for kiwifruit orchard soil moisture content estimation using UAV and ground multi-sensors," Agricultural Water Management, Elsevier, vol. 294(C).
    2. Adel H. Elmetwalli & Yasser S. A. Mazrou & Andrew N. Tyler & Peter D. Hunter & Osama Elsherbiny & Zaher Mundher Yaseen & Salah Elsayed, 2022. "Assessing the Efficiency of Remote Sensing and Machine Learning Algorithms to Quantify Wheat Characteristics in the Nile Delta Region of Egypt," Agriculture, MDPI, vol. 12(3), pages 1-21, February.
    3. Luís Guilherme Teixeira Crusiol & Liang Sun & Zheng Sun & Ruiqing Chen & Yongfeng Wu & Juncheng Ma & Chenxi Song, 2022. "In-Season Monitoring of Maize Leaf Water Content Using Ground-Based and UAV-Based Hyperspectral Data," Sustainability, MDPI, vol. 14(15), pages 1-19, July.
    4. Hui Zhan & Peng Guo & Jiaxin Hao & Jiali Li & Zixu Wang, 2025. "Inversion of County-Level Farmland Soil Moisture Based on SHAP and Stacking Models," Agriculture, MDPI, vol. 15(14), pages 1-21, July.
    5. Yu, Jingxin & Qu, Qinglin & Peng, Shuyi & Wei, Xiaoming & Li, Yinkun & Sun, Congcong, 2025. "Deep learning for intelligent irrigation decision-making: A review," Agricultural Water Management, Elsevier, vol. 320(C).
    6. Song, Xingyang & Zhou, Guangsheng & He, Qijing & Zhou, Huailin, 2020. "Stomatal limitations to photosynthesis and their critical Water conditions in different growth stages of maize under water stress," Agricultural Water Management, Elsevier, vol. 241(C).
    7. Peng, Zhigong & Lin, Shaozhe & Zhang, Baozhong & Wei, Zheng & Liu, Lu & Han, Nana & Cai, Jiabing & Chen, He, 2020. "Winter Wheat Canopy Water Content Monitoring Based on Spectral Transforms and “Three-edge” Parameters," Agricultural Water Management, Elsevier, vol. 240(C).
    8. Li, Zhenxiao & Cheng, Qian & Chen, Zhen & Xiang, Youzhen & Hu, Xiaotao & Lazarovitch, Naftali & Zhen, Jingbo, 2025. "Estimating soil water content of cotton fields using UAV-based multi-source remote sensing data fusion," Agricultural Water Management, Elsevier, vol. 322(C).
    9. Xingyang Song & Guangsheng Zhou & Qijin He, 2021. "Critical Leaf Water Content for Maize Photosynthesis under Drought Stress and Its Response to Rewatering," Sustainability, MDPI, vol. 13(13), pages 1-14, June.
    10. Elmetwalli, Adel H. & Tyler, Andrew N., 2020. "Estimation of maize properties and differentiating moisture and nitrogen deficiency stress via ground – Based remotely sensed data," Agricultural Water Management, Elsevier, vol. 242(C).
    11. Liu, Qi & Hu, Xiaolong & Zhang, Yiqiang & Shi, Liangsheng & Yang, Wei & Yang, Yixuan & Zhang, Ruxin & Zhang, Dongliang & Miao, Ze & Wang, Yifan & Qu, Zhongyi, 2025. "Improving maize water stress diagnosis accuracy by integrating multimodal UAVs data and leaf area index inversion model," Agricultural Water Management, Elsevier, vol. 312(C).
    12. Du, Ruiqi & Xiang, Youzhen & Zhang, Fucang & Chen, Junying & Shi, Hongzhao & Liu, Hao & Yang, Xiaofei & Yang, Ning & Yang, Xizhen & Wang, Tianyang & Wu, Yuxiao, 2024. "Combing transfer learning with the OPtical TRApezoid Model (OPTRAM) to diagnosis small-scale field soil moisture from hyperspectral data," Agricultural Water Management, Elsevier, vol. 298(C).
    13. Shaeden Gokool & Maqsooda Mahomed & Richard Kunz & Alistair Clulow & Mbulisi Sibanda & Vivek Naiken & Kershani Chetty & Tafadzwanashe Mabhaudhi, 2023. "Crop Monitoring in Smallholder Farms Using Unmanned Aerial Vehicles to Facilitate Precision Agriculture Practices: A Scoping Review and Bibliometric Analysis," Sustainability, MDPI, vol. 15(4), pages 1-18, February.
    14. Crusiol, Luís Guilherme Teixeira & Nanni, Marcos Rafael & Furlanetto, Renato Herrig & Sibaldelli, Rubson Natal Ribeiro & Sun, Liang & Gonçalves, Sergio Luiz & Foloni, José Salvador Simonetto & Mertz-H, 2023. "Assessing the sensitive spectral bands for soybean water status monitoring and soil moisture prediction using leaf-based hyperspectral reflectance," Agricultural Water Management, Elsevier, vol. 277(C).
    15. Liu, Quanshan & Wu, Zongjun & Cui, Ningbo & Zheng, Shunsheng & Zhu, Shidan & Jiang, Shouzheng & Wang, Zhihui & Gong, Daozhi & Wang, Yaosheng & Zhao, Lu, 2024. "Soil moisture content estimation of drip-irrigated citrus orchard based on UAV images and machine learning algorithm in Southwest China," Agricultural Water Management, Elsevier, vol. 303(C).
    16. Zoratipour, Elahe & Veysi, Shadman & Mohammadi, Amir Soltani & Nasab, Saeed Boroomand & Naseri, Abd Ali, 2025. "Bias correction of satellite based crop water stress index using machine learning methods," Agricultural Water Management, Elsevier, vol. 320(C).
    17. Hong Li & Wunian Yang & Junjie Lei & Jinxing She & Xiangshan Zhou, 2021. "Estimation of leaf water content from hyperspectral data of different plant species by using three new spectral absorption indices," PLOS ONE, Public Library of Science, vol. 16(3), pages 1-16, March.
    18. Parra-López, Carlos & Ben Abdallah, Saker & Garcia-Garcia, Guillermo & Hassoun, Abdo & Trollman, Hana & Jagtap, Sandeep & Gupta, Sumit & Aït-Kaddour, Abderrahmane & Makmuang, Sureerat & Carmona-Torres, 2025. "Digital technologies for water use and management in agriculture: Recent applications and future outlook," Agricultural Water Management, Elsevier, vol. 309(C).
    19. Zhai, Chao & He, Xinyi & Cao, Zhixiang & Abdou-Tankari, Mahamadou & Wang, Yi & Zhang, Minghao, 2025. "Photovoltaic power forecasting based on VMD-SSA-Transformer: Multidimensional analysis of dataset length, weather mutation and forecast accuracy," Energy, Elsevier, vol. 324(C).
    20. Wu, Zongjun & Cui, Ningbo & Zhang, Wenjiang & Yang, Yenan & Gong, Daozhi & Liu, Quanshan & Zhao, Lu & Xing, Liwen & He, Qingyan & Zhu, Shidan & Zheng, Shunsheng & Wen, Shenglin & Zhu, Bin, 2024. "Estimation of soil moisture in drip-irrigated citrus orchards using multi-modal UAV remote sensing," Agricultural Water Management, Elsevier, vol. 302(C).

    More about this item

    Keywords

    ;
    ;
    ;

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:agiwat:v:324:y:2026:i:c:s0378377425007942. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/agwat .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.