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Beta-lactam, aminoglycoside, and quinolone resistance in Escherichia coli strains isolated from shrimps and mussels in the Marmara Sea

Author

Listed:
  • B Celik

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • B Ergul

    (Ambarli Veterinary Border Control Point Directorate, Republic of Turkiye Ministry of Agriculture and Forestry, Istanbul, Turkiye)

  • AI Kekec

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • B Halac

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • B Maslak

    (Institute of Graduate Studies, Istanbul University - Cerrahpasa, Avcilar/Istanbul, Turkiye)

  • B Diren Sigirci

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • B Basaran Kahraman

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • AF Bagcigil

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • K Metiner

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

  • S Ak

    (Department of Microbiology, Faculty of Veterinary Medicine, Istanbul University - Cerrahpasa, Buyukcekmece/Istanbul, Turkiye)

Abstract

The purpose of the study was to examine the prevalence of Escherichia coli in shrimps and mussels, and to determine the distribution of β-lactam, aminoglycoside, quinolone, and multi-drug resistance phenotypically and genotypically in E. coli isolates obtained from mussels and shrimps in Istanbul. Faecal samples were collected from mussels (n = 96) and shrimps (n = 96) from the Marmara Sea coastline and fish markets in Istanbul. For the detection of antibiotic susceptibilities, seven antibiotic groups were used. β-lactamase, aminoglycoside, and quinolone genes were also determined. A total of 34 (17.7%, 15 shrimps, and 19 mussels) E. coli were isolated, and 17 (50%) were found to be resistant to one or more antimicrobials. The highest resistance was seen against aminoglycosides with 11 isolates (32.35%), followed by quinolones with 10 isolates (29.41%) and extended-spectrum β-lactamase (ESBL) with 4 isolates (11.76%). Multi-drug resistance was detected in 5 isolates (14.7%) from 3 shrimp and 2 mussel samples. The prevalence of ESBL genes was demonstrated at 3.84% in mussels and shrimp samples. There were no AmpC and carbapenemase-producing genes. These samples harbored blaCTX-M-1 (n = 3) and blaTEM (n = 4). Ten isolates were resistant to aminoglycosides genotypically. Resistance genes detected were strB in 2 isolates, aadA in 5, strB and aadA together in 3, ANT('')-Ia, aphA1 and aphA2 simultaneously in 3, aphA1 in 1, aac(3)-IIa in 1 isolate. aac(6')-Ib-cr gene was detected in only one of 10 phenotypically resistant isolates to quinolones.

Suggested Citation

  • B Celik & B Ergul & AI Kekec & B Halac & B Maslak & B Diren Sigirci & B Basaran Kahraman & AF Bagcigil & K Metiner & S Ak, 2023. "Beta-lactam, aminoglycoside, and quinolone resistance in Escherichia coli strains isolated from shrimps and mussels in the Marmara Sea," Veterinární medicína, Czech Academy of Agricultural Sciences, vol. 68(5), pages 208-217.
    • Handle: RePEc:caa:jnlvet:v:68:y:2023:i:5:id:105-2022-vetmed
    DOI: 10.17221/105/2022-VETMED
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    References listed on IDEAS

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    1. Miriam Reverter & Samira Sarter & Domenico Caruso & Jean-Christophe Avarre & Marine Combe & Elodie Pepey & Laurent Pouyaud & Sarahi Vega-Heredía & Hugues Verdal & Rodolphe E. Gozlan, 2020. "Aquaculture at the crossroads of global warming and antimicrobial resistance," Nature Communications, Nature, vol. 11(1), pages 1-8, December.
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