IDEAS home Printed from https://ideas.repec.org/a/bla/scjsta/v37y2010i4p531-552.html

The Dantzig Selector in Cox's Proportional Hazards Model

Author

Listed:
  • ANESTIS ANTONIADIS
  • PIOTR FRYZLEWICZ
  • FRÉDÉRIQUE LETUÉ

Abstract

. The Dantzig selector (DS) is a recent approach of estimation in high‐dimensional linear regression models with a large number of explanatory variables and a relatively small number of observations. As in the least absolute shrinkage and selection operator (LASSO), this approach sets certain regression coefficients exactly to zero, thus performing variable selection. However, such a framework, contrary to the LASSO, has never been used in regression models for survival data with censoring. A key motivation of this article is to study the estimation problem for Cox's proportional hazards (PH) function regression models using a framework that extends the theory, the computational advantages and the optimal asymptotic rate properties of the DS to the class of Cox's PH under appropriate sparsity scenarios. We perform a detailed simulation study to compare our approach with other methods and illustrate it on a well‐known microarray gene expression data set for predicting survival from gene expressions.

Suggested Citation

  • Anestis Antoniadis & Piotr Fryzlewicz & Frédérique Letué, 2010. "The Dantzig Selector in Cox's Proportional Hazards Model," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 37(4), pages 531-552, December.
  • Handle: RePEc:bla:scjsta:v:37:y:2010:i:4:p:531-552
    DOI: 10.1111/j.1467-9469.2009.00685.x
    as

    Download full text from publisher

    File URL: https://doi.org/10.1111/j.1467-9469.2009.00685.x
    Download Restriction: no

    File URL: https://libkey.io/10.1111/j.1467-9469.2009.00685.x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Hui Zou, 2008. "A note on path-based variable selection in the penalized proportional hazards model," Biometrika, Biometrika Trust, vol. 95(1), pages 241-247.
    2. Jianqing Fan & Jinchi Lv, 2008. "Sure independence screening for ultrahigh dimensional feature space," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(5), pages 849-911, November.
    3. Jovanovic, Borko D. & Hosmer, David W. & Buonaccorsi, John P., 1995. "Equivalence of several methods for efficient best subsets selection in generalized linear models," Computational Statistics & Data Analysis, Elsevier, vol. 20(1), pages 59-64, July.
    4. van Wieringen, Wessel N. & Kun, David & Hampel, Regina & Boulesteix, Anne-Laure, 2009. "Survival prediction using gene expression data: A review and comparison," Computational Statistics & Data Analysis, Elsevier, vol. 53(5), pages 1590-1603, March.
    5. Hao Helen Zhang & Wenbin Lu, 2007. "Adaptive Lasso for Cox's proportional hazards model," Biometrika, Biometrika Trust, vol. 94(3), pages 691-703.
    6. Wang, Hansheng & Leng, Chenlei, 2007. "Unified LASSO Estimation by Least Squares Approximation," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 1039-1048, September.
    7. Bair, Eric & Hastie, Trevor & Paul, Debashis & Tibshirani, Robert, 2006. "Prediction by Supervised Principal Components," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 119-137, March.
    8. Gareth M. James & Peter Radchenko, 2009. "A generalized Dantzig selector with shrinkage tuning," Biometrika, Biometrika Trust, vol. 96(2), pages 323-337.
    9. Torben Martinussen & Thomas H. Scheike, 2009. "Covariate Selection for the Semiparametric Additive Risk Model," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 36(4), pages 602-619, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Gerda Claeskens, 2012. "Focused estimation and model averaging with penalization methods: an overview," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 66(3), pages 272-287, August.
    2. Jianbo Li & Yuan Li & Riquan Zhang, 2017. "B spline variable selection for the single index models," Statistical Papers, Springer, vol. 58(3), pages 691-706, September.
    3. Li, Jianbo & Gu, Minggao & Zhang, Riquan, 2013. "Variable selection for general transformation models with right censored data via nonconcave penalties," Journal of Multivariate Analysis, Elsevier, vol. 115(C), pages 445-456.
    4. Li, Jianbo & Gu, Minggao, 2012. "Adaptive LASSO for general transformation models with right censored data," Computational Statistics & Data Analysis, Elsevier, vol. 56(8), pages 2583-2597.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Antoniadis, Anestis & Fryzlewicz, Piotr & Letué, Frédérique, 2010. "The Dantzig selector in Cox's proportional hazards model," LSE Research Online Documents on Economics 30992, London School of Economics and Political Science, LSE Library.
    2. Yan, Xiaodong & Wang, Hongni & Wang, Wei & Xie, Jinhan & Ren, Yanyan & Wang, Xinjun, 2021. "Optimal model averaging forecasting in high-dimensional survival analysis," International Journal of Forecasting, Elsevier, vol. 37(3), pages 1147-1155.
    3. Bergersen Linn Cecilie & Glad Ingrid K. & Lyng Heidi, 2011. "Weighted Lasso with Data Integration," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 10(1), pages 1-29, August.
    4. Tomohiro Ando & Ruey S. Tsay, 2009. "Model selection for generalized linear models with factor‐augmented predictors," Applied Stochastic Models in Business and Industry, John Wiley & Sons, vol. 25(3), pages 207-235, May.
    5. Jianqing Fan & Yang Feng & Jiancheng Jiang & Xin Tong, 2016. "Feature Augmentation via Nonparametrics and Selection (FANS) in High-Dimensional Classification," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(513), pages 275-287, March.
    6. Hansheng Wang & Chih‐Ling Tsai, 2009. "‘Model selection for generalized linear models with factor‐augmented predictors’," Applied Stochastic Models in Business and Industry, John Wiley & Sons, vol. 25(3), pages 241-242, May.
    7. Jingxuan Luo & Lili Yue & Gaorong Li, 2023. "Overview of High-Dimensional Measurement Error Regression Models," Mathematics, MDPI, vol. 11(14), pages 1-22, July.
    8. Zhao, Xiaobing & Zhou, Xian, 2014. "Sufficient dimension reduction on marginal regression for gaps of recurrent events," Journal of Multivariate Analysis, Elsevier, vol. 127(C), pages 56-71.
    9. Chen, Xiaolin & Wang, Qihua, 2013. "Variable selection in the additive rate model for recurrent event data," Computational Statistics & Data Analysis, Elsevier, vol. 57(1), pages 491-503.
    10. Guang Cheng & Hao Zhang & Zuofeng Shang, 2015. "Sparse and efficient estimation for partial spline models with increasing dimension," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 67(1), pages 93-127, February.
    11. Hojin Yang & Hongtu Zhu & Joseph G. Ibrahim, 2018. "MILFM: Multiple index latent factor model based on high‐dimensional features," Biometrics, The International Biometric Society, vol. 74(3), pages 834-844, September.
    12. Yichen Cheng & Xinlei Wang & Yusen Xia, 2021. "Supervised t -Distributed Stochastic Neighbor Embedding for Data Visualization and Classification," INFORMS Journal on Computing, INFORMS, vol. 33(2), pages 566-585, May.
    13. Shu, Lei & Hao, Yifan & Chen, Yu & Yang, Qing, 2025. "SFQRA: Scaled factor-augmented quantile regression with aggregation in conditional mean forecasting," Journal of Multivariate Analysis, Elsevier, vol. 207(C).
    14. Hao, Meiling & Lin, Yunyuan & Zhao, Xingqiu, 2016. "A relative error-based approach for variable selection," Computational Statistics & Data Analysis, Elsevier, vol. 103(C), pages 250-262.
    15. Zhang, Hao Helen & Lu, Wenbin & Wang, Hansheng, 2010. "On sparse estimation for semiparametric linear transformation models," Journal of Multivariate Analysis, Elsevier, vol. 101(7), pages 1594-1606, August.
    16. Wei Zhang & Takayo Ota & Viji Shridhar & Jeremy Chien & Baolin Wu & Rui Kuang, 2013. "Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment," PLOS Computational Biology, Public Library of Science, vol. 9(3), pages 1-16, March.
    17. Zhao, Sihai Dave & Li, Yi, 2012. "Principled sure independence screening for Cox models with ultra-high-dimensional covariates," Journal of Multivariate Analysis, Elsevier, vol. 105(1), pages 397-411.
    18. Denis Agniel & Katherine P. Liao & Tianxi Cai, 2016. "Estimation and testing for multiple regulation of multivariate mixed outcomes," Biometrics, The International Biometric Society, vol. 72(4), pages 1194-1205, December.
    19. Na You & Shun He & Xueqin Wang & Junxian Zhu & Heping Zhang, 2018. "Subtype classification and heterogeneous prognosis model construction in precision medicine," Biometrics, The International Biometric Society, vol. 74(3), pages 814-822, September.
    20. Yu Takagi & Hirokazu Matsuda & Yukio Taniguchi & Hiroaki Iwaisaki, 2014. "Predicting the Phenotypic Values of Physiological Traits Using SNP Genotype and Gene Expression Data in Mice," PLOS ONE, Public Library of Science, vol. 9(12), pages 1-17, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:scjsta:v:37:y:2010:i:4:p:531-552. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0303-6898 .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.