IDEAS home Printed from https://ideas.repec.org/a/eee/jmvana/v143y2016icp398-413.html
   My bibliography  Save this article

Extending mixtures of factor models using the restricted multivariate skew-normal distribution

Author

Listed:
  • Lin, Tsung-I
  • McLachlan, Geoffrey J.
  • Lee, Sharon X.

Abstract

The mixture of factor analyzers (MFA) model provides a powerful tool for analyzing high-dimensional data as it can reduce the number of free parameters through its factor-analytic representation of the component covariance matrices. This paper extends the MFA model to incorporate a restricted version of the multivariate skew-normal distribution for the latent component factors, called mixtures of skew-normal factor analyzers (MSNFA). The proposed MSNFA model allows us to relax the need of the normality assumption for the latent factors in order to accommodate skewness in the observed data. The MSNFA model thus provides an approach to model-based density estimation and clustering of high-dimensional data exhibiting asymmetric characteristics. A computationally feasible Expectation Conditional Maximization (ECM) algorithm is developed for computing the maximum likelihood estimates of model parameters. The potential of the proposed methodology is exemplified using both real and simulated data.

Suggested Citation

  • Lin, Tsung-I & McLachlan, Geoffrey J. & Lee, Sharon X., 2016. "Extending mixtures of factor models using the restricted multivariate skew-normal distribution," Journal of Multivariate Analysis, Elsevier, vol. 143(C), pages 398-413.
  • Handle: RePEc:eee:jmvana:v:143:y:2016:i:c:p:398-413
    DOI: 10.1016/j.jmva.2015.09.025
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0047259X15002523
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.jmva.2015.09.025?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. McLachlan, Geoff & Lee, Sharon X, 2013. "EMMIXuskew: An R Package for Fitting Mixtures of Multivariate Skew t Distributions via the EM Algorithm," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 55(i12).
    2. Murray, Paula M. & Browne, Ryan P. & McNicholas, Paul D., 2014. "Mixtures of skew-t factor analyzers," Computational Statistics & Data Analysis, Elsevier, vol. 77(C), pages 326-335.
    3. Melnykov, Volodymyr, 2013. "On the distribution of posterior probabilities in finite mixture models with application in clustering," Journal of Multivariate Analysis, Elsevier, vol. 122(C), pages 175-189.
    4. Reinaldo B. Arellano‐Valle & Adelchi Azzalini, 2006. "On the Unification of Families of Skew‐normal Distributions," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 33(3), pages 561-574, September.
    5. Melnykov, Volodymyr & Chen, Wei-Chen & Maitra, Ranjan, 2012. "MixSim: An R Package for Simulating Data to Study Performance of Clustering Algorithms," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 51(i12).
    6. A. Azzalini & A. Capitanio, 1999. "Statistical applications of the multivariate skew normal distribution," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 61(3), pages 579-602.
    7. Wan-Lun Wang & Tsung-I Lin, 2013. "An efficient ECM algorithm for maximum likelihood estimation in mixtures of t-factor analyzers," Computational Statistics, Springer, vol. 28(2), pages 751-769, April.
    8. Adelchi Azzalini & Antonella Capitanio, 2003. "Distributions generated by perturbation of symmetry with emphasis on a multivariate skew t‐distribution," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 65(2), pages 367-389, May.
    9. Lawrence Hubert & Phipps Arabie, 1985. "Comparing partitions," Journal of Classification, Springer;The Classification Society, vol. 2(1), pages 193-218, December.
    10. McLachlan, G. J. & Peel, D. & Bean, R. W., 2003. "Modelling high-dimensional data by mixtures of factor analyzers," Computational Statistics & Data Analysis, Elsevier, vol. 41(3-4), pages 379-388, January.
    11. O’Hagan, Adrian & Murphy, Thomas Brendan & Gormley, Isobel Claire, 2012. "Computational aspects of fitting mixture models via the expectation–maximization algorithm," Computational Statistics & Data Analysis, Elsevier, vol. 56(12), pages 3843-3864.
    12. Angela Montanari & Cinzia Viroli, 2010. "A skew-normal factor model for the analysis of student satisfaction towards university courses," Journal of Applied Statistics, Taylor & Francis Journals, vol. 37(3), pages 473-487.
    13. Adelchi Azzalini, 2005. "The Skew‐normal Distribution and Related Multivariate Families," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 32(2), pages 159-188, June.
    14. Biernacki, Christophe & Celeux, Gilles & Govaert, Gerard, 2003. "Choosing starting values for the EM algorithm for getting the highest likelihood in multivariate Gaussian mixture models," Computational Statistics & Data Analysis, Elsevier, vol. 41(3-4), pages 561-575, January.
    15. Wang, Wan-Lun, 2013. "Mixtures of common factor analyzers for high-dimensional data with missing information," Journal of Multivariate Analysis, Elsevier, vol. 117(C), pages 120-133.
    16. Arellano-Valle, Reinaldo B. & Genton, Marc G., 2005. "On fundamental skew distributions," Journal of Multivariate Analysis, Elsevier, vol. 96(1), pages 93-116, September.
    17. Karlis, Dimitris & Xekalaki, Evdokia, 2003. "Choosing initial values for the EM algorithm for finite mixtures," Computational Statistics & Data Analysis, Elsevier, vol. 41(3-4), pages 577-590, January.
    18. McLachlan, G.J. & Bean, R.W. & Ben-Tovim Jones, L., 2007. "Extension of the mixture of factor analyzers model to incorporate the multivariate t-distribution," Computational Statistics & Data Analysis, Elsevier, vol. 51(11), pages 5327-5338, July.
    19. Wang, Wan-Lun, 2015. "Mixtures of common t-factor analyzers for modeling high-dimensional data with missing values," Computational Statistics & Data Analysis, Elsevier, vol. 83(C), pages 223-235.
    20. Ole E. Barndorff‐Nielsen & Neil Shephard, 2001. "Non‐Gaussian Ornstein–Uhlenbeck‐based models and some of their uses in financial economics," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 63(2), pages 167-241.
    21. Melnykov, Volodymyr & Melnykov, Igor, 2012. "Initializing the EM algorithm in Gaussian mixture models with an unknown number of components," Computational Statistics & Data Analysis, Elsevier, vol. 56(6), pages 1381-1395.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Chaofeng Yuan & Wensheng Zhu & Xuming He & Jianhua Guo, 2019. "A mixture factor model with applications to microarray data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(1), pages 60-76, March.
    2. Sanjeena Subedi & Paul D. McNicholas, 2021. "A Variational Approximations-DIC Rubric for Parameter Estimation and Mixture Model Selection Within a Family Setting," Journal of Classification, Springer;The Classification Society, vol. 38(1), pages 89-108, April.
    3. Naderi, Mehrdad & Hung, Wen-Liang & Lin, Tsung-I & Jamalizadeh, Ahad, 2019. "A novel mixture model using the multivariate normal mean–variance mixture of Birnbaum–Saunders distributions and its application to extrasolar planets," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 126-138.
    4. Murray, Paula M. & Browne, Ryan P. & McNicholas, Paul D., 2017. "A mixture of SDB skew-t factor analyzers," Econometrics and Statistics, Elsevier, vol. 3(C), pages 160-168.
    5. Libin Jin & Sung Nok Chiu & Jianhua Zhao & Lixing Zhu, 2023. "A constrained maximum likelihood estimation for skew normal mixtures," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 86(4), pages 391-419, May.
    6. Sharon X. Lee & Tsung-I Lin & Geoffrey J. McLachlan, 2021. "Mixtures of factor analyzers with scale mixtures of fundamental skew normal distributions," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 15(2), pages 481-512, June.
    7. Mohsen Maleki & Darren Wraith, 2019. "Mixtures of multivariate restricted skew-normal factor analyzer models in a Bayesian framework," Computational Statistics, Springer, vol. 34(3), pages 1039-1053, September.
    8. Bhat, Chandra R. & Astroza, Sebastian & Hamdi, Amin S., 2017. "A spatial generalized ordered-response model with skew normal kernel error terms with an application to bicycling frequency," Transportation Research Part B: Methodological, Elsevier, vol. 95(C), pages 126-148.
    9. Lee, Sharon X. & McLachlan, Geoffrey J., 2021. "On formulations of skew factor models: Skew factors and/or skew errors," Statistics & Probability Letters, Elsevier, vol. 168(C).
    10. Paul D. McNicholas, 2016. "Model-Based Clustering," Journal of Classification, Springer;The Classification Society, vol. 33(3), pages 331-373, October.
    11. Paula M. Murray & Ryan P. Browne & Paul D. McNicholas, 2020. "Mixtures of Hidden Truncation Hyperbolic Factor Analyzers," Journal of Classification, Springer;The Classification Society, vol. 37(2), pages 366-379, July.
    12. José E. Chacón, 2019. "Mixture model modal clustering," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(2), pages 379-404, June.
    13. Francisco H. C. Alencar & Larissa A Matos & Víctor H. Lachos, 2022. "Finite Mixture of Censored Linear Mixed Models for Irregularly Observed Longitudinal Data," Journal of Classification, Springer;The Classification Society, vol. 39(3), pages 463-486, November.
    14. Wan-Lun Wang, 2019. "Mixture of multivariate t nonlinear mixed models for multiple longitudinal data with heterogeneity and missing values," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(1), pages 196-222, March.
    15. Wan-Lun Wang & Tsung-I Lin, 2022. "Robust clustering of multiply censored data via mixtures of t factor analyzers," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 31(1), pages 22-53, March.
    16. Michael P. B. Gallaugher & Paul D. McNicholas, 2019. "On Fractionally-Supervised Classification: Weight Selection and Extension to the Multivariate t-Distribution," Journal of Classification, Springer;The Classification Society, vol. 36(2), pages 232-265, July.
    17. Wan-Lun Wang & Tsung-I Lin, 2023. "Model-based clustering via mixtures of unrestricted skew normal factor analyzers with complete and incomplete data," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 32(3), pages 787-817, September.
    18. Hashemi, Farzane & Naderi, Mehrdad & Jamalizadeh, Ahad & Bekker, Andriette, 2021. "A flexible factor analysis based on the class of mean-mixture of normal distributions," Computational Statistics & Data Analysis, Elsevier, vol. 157(C).
    19. Wan-Lun Wang & Luis M. Castro & Yen-Ting Chang & Tsung-I Lin, 2019. "Mixtures of restricted skew-t factor analyzers with common factor loadings," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(2), pages 445-480, June.
    20. Lee, Sharon X. & McLachlan, Geoffrey J., 2022. "An overview of skew distributions in model-based clustering," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
    21. Guangbao Guo & Chunjie Wei & Guoqi Qian, 2023. "Sparse online principal component analysis for parameter estimation in factor model," Computational Statistics, Springer, vol. 38(2), pages 1095-1116, June.
    22. Matteo Farnè & Angelos T. Vouldis, 2021. "Banks’ business models in the euro area: a cluster analysis in high dimensions," Annals of Operations Research, Springer, vol. 305(1), pages 23-57, October.
    23. Wan-Lun Wang & Tsung-I Lin, 2022. "Robust clustering via mixtures of t factor analyzers with incomplete data," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 16(3), pages 659-690, September.
    24. Jafari Khaledi, Majid & Zareifard, Hamid & Boojari, Hossein, 2023. "A spatial skew-Gaussian process with a specified covariance function," Statistics & Probability Letters, Elsevier, vol. 192(C).

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Morris, Katherine & Punzo, Antonio & McNicholas, Paul D. & Browne, Ryan P., 2019. "Asymmetric clusters and outliers: Mixtures of multivariate contaminated shifted asymmetric Laplace distributions," Computational Statistics & Data Analysis, Elsevier, vol. 132(C), pages 145-166.
    2. Wan-Lun Wang & Tsung-I Lin, 2022. "Robust clustering of multiply censored data via mixtures of t factor analyzers," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 31(1), pages 22-53, March.
    3. Murray, Paula M. & Browne, Ryan P. & McNicholas, Paul D., 2017. "Hidden truncation hyperbolic distributions, finite mixtures thereof, and their application for clustering," Journal of Multivariate Analysis, Elsevier, vol. 161(C), pages 141-156.
    4. Wang, Wan-Lun, 2015. "Mixtures of common t-factor analyzers for modeling high-dimensional data with missing values," Computational Statistics & Data Analysis, Elsevier, vol. 83(C), pages 223-235.
    5. Tsung-I Lin & Pal Wu & Geoffrey McLachlan & Sharon Lee, 2015. "A robust factor analysis model using the restricted skew- $$t$$ t distribution," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 24(3), pages 510-531, September.
    6. Zhu, Xuwen & Melnykov, Volodymyr, 2018. "Manly transformation in finite mixture modeling," Computational Statistics & Data Analysis, Elsevier, vol. 121(C), pages 190-208.
    7. Lee, Sharon X. & McLachlan, Geoffrey J., 2022. "An overview of skew distributions in model-based clustering," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
    8. Galimberti, Giuliano & Soffritti, Gabriele, 2014. "A multivariate linear regression analysis using finite mixtures of t distributions," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 138-150.
    9. Murray, Paula M. & Browne, Ryan P. & McNicholas, Paul D., 2017. "A mixture of SDB skew-t factor analyzers," Econometrics and Statistics, Elsevier, vol. 3(C), pages 160-168.
    10. Sharon X. Lee & Tsung-I Lin & Geoffrey J. McLachlan, 2021. "Mixtures of factor analyzers with scale mixtures of fundamental skew normal distributions," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 15(2), pages 481-512, June.
    11. Kahrari, F. & Rezaei, M. & Yousefzadeh, F. & Arellano-Valle, R.B., 2016. "On the multivariate skew-normal-Cauchy distribution," Statistics & Probability Letters, Elsevier, vol. 117(C), pages 80-88.
    12. Paul D. McNicholas, 2016. "Model-Based Clustering," Journal of Classification, Springer;The Classification Society, vol. 33(3), pages 331-373, October.
    13. Wang, Wan-Lun, 2013. "Mixtures of common factor analyzers for high-dimensional data with missing information," Journal of Multivariate Analysis, Elsevier, vol. 117(C), pages 120-133.
    14. Cabral, Celso Rômulo Barbosa & Lachos, Víctor Hugo & Prates, Marcos O., 2012. "Multivariate mixture modeling using skew-normal independent distributions," Computational Statistics & Data Analysis, Elsevier, vol. 56(1), pages 126-142, January.
    15. Hashemi, Farzane & Naderi, Mehrdad & Jamalizadeh, Ahad & Bekker, Andriette, 2021. "A flexible factor analysis based on the class of mean-mixture of normal distributions," Computational Statistics & Data Analysis, Elsevier, vol. 157(C).
    16. Wan-Lun Wang & Luis M. Castro & Yen-Ting Chang & Tsung-I Lin, 2019. "Mixtures of restricted skew-t factor analyzers with common factor loadings," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(2), pages 445-480, June.
    17. Wan-Lun Wang & Tsung-I Lin, 2017. "Flexible clustering via extended mixtures of common t-factor analyzers," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 101(3), pages 227-252, July.
    18. Azzalini, Adelchi & Browne, Ryan P. & Genton, Marc G. & McNicholas, Paul D., 2016. "On nomenclature for, and the relative merits of, two formulations of skew distributions," Statistics & Probability Letters, Elsevier, vol. 110(C), pages 201-206.
    19. Jamalizadeh, A. & Balakrishnan, N., 2010. "Distributions of order statistics and linear combinations of order statistics from an elliptical distribution as mixtures of unified skew-elliptical distributions," Journal of Multivariate Analysis, Elsevier, vol. 101(6), pages 1412-1427, July.
    20. Manabu Asai & Michael McAleer & Jun Yu, 2006. "Multivariate Stochastic Volatility," Microeconomics Working Papers 22058, East Asian Bureau of Economic Research.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:jmvana:v:143:y:2016:i:c:p:398-413. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/wps/find/journaldescription.cws_home/622892/description#description .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.