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June 2009, Volume 5, Issue 6
- 1-10 Meta-Analysis of 28,141 Individuals Identifies Common Variants within Five New Loci That Influence Uric Acid Concentrations
by Melanie Kolz & Toby Johnson & Serena Sanna & Alexander Teumer & Veronique Vitart & Markus Perola & Massimo Mangino & Eva Albrecht & Chris Wallace & Martin Farrall & Åsa Johansson & Dale R Nyholt & Yurii Aulchenko & Jacques S Beckmann & Sven Bergmann & Murielle Bochud & Morris Brown & Harry Campbell & for the EUROSPAN Consortium & John Connell & Anna Dominiczak & Georg Homuth & Claudia Lamina & Mark I McCarthy & for the ENGAGE Consortium & Thomas Meitinger & Vincent Mooser & Patricia Munroe & Matthias Nauck & John Peden & Holger Prokisch & Perttu Salo & Veikko Salomaa & Nilesh J Samani & David Schlessinger & Manuela Uda & Uwe Völker & Gérard Waeber & Dawn Waterworth & Rui Wang-Sattler & Alan F Wright & Jerzy Adamski & John B Whitfield & Ulf Gyllensten & James F Wilson & Igor Rudan & Peter Pramstaller & Hugh Watkins & for the PROCARDIS Consortium & Angela Doering & H-Erich Wichmann & for the KORA Study & Tim D Spector & Leena Peltonen & Henry Völzke & Ramaiah Nagaraja & Peter Vollenweider & Mark Caulfield & for the WTCCC & Thomas Illig & Christian Gieger - 1-10 The Impact of Divergence Time on the Nature of Population Structure: An Example from Iceland
by Alkes L Price & Agnar Helgason & Snaebjorn Palsson & Hreinn Stefansson & David St. Clair & Ole A Andreassen & David Reich & Augustine Kong & Kari Stefansson - 1-13 Genome-Wide Association Scan Meta-Analysis Identifies Three Loci Influencing Adiposity and Fat Distribution
by Cecilia M Lindgren & Iris M Heid & Joshua C Randall & Claudia Lamina & Valgerdur Steinthorsdottir & Lu Qi & Elizabeth K Speliotes & Gudmar Thorleifsson & Cristen J Willer & Blanca M Herrera & Anne U Jackson & Noha Lim & Paul Scheet & Nicole Soranzo & Najaf Amin & Yurii S Aulchenko & John C Chambers & Alexander Drong & Jian'an Luan & Helen N Lyon & Fernando Rivadeneira & Serena Sanna & Nicholas J Timpson & M Carola Zillikens & Jing Hua Zhao & Peter Almgren & Stefania Bandinelli & Amanda J Bennett & Richard N Bergman & Lori L Bonnycastle & Suzannah J Bumpstead & Stephen J Chanock & Lynn Cherkas & Peter Chines & Lachlan Coin & Cyrus Cooper & Gabriel Crawford & Angela Doering & Anna Dominiczak & Alex S F Doney & Shah Ebrahim & Paul Elliott & Michael R Erdos & Karol Estrada & Luigi Ferrucci & Guido Fischer & Nita G Forouhi & Christian Gieger & Harald Grallert & Christopher J Groves & Scott Grundy & Candace Guiducci & David Hadley & Anders Hamsten & Aki S Havulinna & Albert Hofman & Rolf Holle & John W Holloway & Thomas Illig & Bo Isomaa & Leonie C Jacobs & Karen Jameson & Pekka Jousilahti & Fredrik Karpe & Johanna Kuusisto & Jaana Laitinen & G Mark Lathrop & Debbie A Lawlor & Massimo Mangino & Wendy L McArdle & Thomas Meitinger & Mario A Morken & Andrew P Morris & Patricia Munroe & Narisu Narisu & Anna Nordström & Peter Nordström & Ben A Oostra & Colin N A Palmer & Felicity Payne & John F Peden & Inga Prokopenko & Frida Renström & Aimo Ruokonen & Veikko Salomaa & Manjinder S Sandhu & Laura J Scott & Angelo Scuteri & Kaisa Silander & Kijoung Song & Xin Yuan & Heather M Stringham & Amy J Swift & Tiinamaija Tuomi & Manuela Uda & Peter Vollenweider & Gerard Waeber & Chris Wallace & G Bragi Walters & Michael N Weedon & The Wellcome Trust Case Control Consortium & Jacqueline C M Witteman & Cuilin Zhang & Weihua Zhang & Mark J Caulfield & Francis S Collins & George Davey Smith & Ian N M Day & Paul W Franks & Andrew T Hattersley & Frank B Hu & Marjo-Riitta Jarvelin & Augustine Kong & Jaspal S Kooner & Markku Laakso & Edward Lakatta & Vincent Mooser & Andrew D Morris & Leena Peltonen & Nilesh J Samani & Timothy D Spector & David P Strachan & Toshiko Tanaka & Jaakko Tuomilehto & André G Uitterlinden & Cornelia M van Duijn & Nicholas J Wareham & Hugh Watkins for the PROCARDIS consortia & Dawn M Waterworth & Michael Boehnke & Panos Deloukas & Leif Groop & David J Hunter & Unnur Thorsteinsdottir & David Schlessinger & H-Erich Wichmann & Timothy M Frayling & Gonçalo R Abecasis & Joel N Hirschhorn & Ruth J F Loos & Kari Stefansson & Karen L Mohlke & Inês Barroso & Mark I McCarthy for the GIANT consortium - 1-15 A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies
by Bryan N Howie & Peter Donnelly & Jonathan Marchini - 1-15 Identifying Relationships among Genomic Disease Regions: Predicting Genes at Pathogenic SNP Associations and Rare Deletions
by Soumya Raychaudhuri & Robert M Plenge & Elizabeth J Rossin & Aylwin C Y Ng & International Schizophrenia Consortium & Shaun M Purcell & Pamela Sklar & Edward M Scolnick & Ramnik J Xavier & David Altshuler & Mark J Daly
May 2009, Volume 5, Issue 5
- 1-13 Modulated Modularity Clustering as an Exploratory Tool for Functional Genomic Inference
by Eric A Stone & Julien F Ayroles - 1-18 Epistatic Module Detection for Case-Control Studies: A Bayesian Model with a Gibbs Sampling Strategy
by Wanwan Tang & Xuebing Wu & Rui Jiang & Yanda Li
April 2009, Volume 5, Issue 4
- 1-13 Rapid and Accurate Multiple Testing Correction and Power Estimation for Millions of Correlated Markers
by Buhm Han & Hyun Min Kang & Eleazar Eskin - 1-13 Meta-Analysis of Genome-Wide Scans for Human Adult Stature Identifies Novel Loci and Associations with Measures of Skeletal Frame Size
by Nicole Soranzo & Fernando Rivadeneira & Usha Chinappen-Horsley & Ida Malkina & J Brent Richards & Naomi Hammond & Lisette Stolk & Alexandra Nica & Michael Inouye & Albert Hofman & Jonathan Stephens & Eleanor Wheeler & Pascal Arp & Rhian Gwilliam & P Mila Jhamai & Simon Potter & Amy Chaney & Mohammed J R Ghori & Radhi Ravindrarajah & Sergey Ermakov & Karol Estrada & Huibert A P Pols & Frances M Williams & Wendy L McArdle & Joyce B van Meurs & Ruth J F Loos & Emmanouil T Dermitzakis & Kourosh R Ahmadi & Deborah J Hart & Willem H Ouwehand & Nicholas J Wareham & Inês Barroso & Manjinder S Sandhu & David P Strachan & Gregory Livshits & Timothy D Spector & André G Uitterlinden & Panos Deloukas
March 2009, Volume 5, Issue 3
- 1-7 Measures of Autozygosity in Decline: Globalization, Urbanization, and Its Implications for Medical Genetics
by Michael A Nalls & Javier Simon-Sanchez & J Raphael Gibbs & Coro Paisan-Ruiz & Jose Tomas Bras & Toshiko Tanaka & Mar Matarin & Sonja Scholz & Charles Weitz & Tamara B Harris & Luigi Ferrucci & John Hardy & Andrew B Singleton - 1-7 The Distribution of Fitness Effects of Beneficial Mutations in Pseudomonas aeruginosa
by R Craig MacLean & Angus Buckling - 1-8 Rapid Pathway Evolution Facilitated by Horizontal Gene Transfers across Prokaryotic Lineages
by Wataru Iwasaki & Toshihisa Takagi - 1-9 A Genome-Wide Association Study Confirms VKORC1, CYP2C9, and CYP4F2 as Principal Genetic Determinants of Warfarin Dose
by Fumihiko Takeuchi & Ralph McGinnis & Stephane Bourgeois & Chris Barnes & Niclas Eriksson & Nicole Soranzo & Pamela Whittaker & Venkatesh Ranganath & Vasudev Kumanduri & William McLaren & Lennart Holm & Jonatan Lindh & Anders Rane & Mia Wadelius & Panos Deloukas
January 2009, Volume 5, Issue 1
- 1-8 IL2RA Genetic Heterogeneity in Multiple Sclerosis and Type 1 Diabetes Susceptibility and Soluble Interleukin-2 Receptor Production
by Lisa M Maier & Christopher E Lowe & Jason Cooper & Kate Downes & David E Anderson & Christopher Severson & Pamela M Clark & Brian Healy & Neil Walker & Cristin Aubin & Jorge R Oksenberg & Stephen L Hauser & Alistair Compston & Stephen Sawcer & The International Multiple Sclerosis Genetics Consortium & Philip L De Jager & Linda S Wicker & John A Todd & David A Hafler
December 2008, Volume 4, Issue 12
- 1-10 The Population Genetics of dN/dS
by Sergey Kryazhimskiy & Joshua B Plotkin - 1-11 Practical Issues in Imputation-Based Association Mapping
by Yongtao Guan & Matthew Stephens
November 2008, Volume 4, Issue 11
- 1-16 Genetic Analysis of Human Traits In Vitro: Drug Response and Gene Expression in Lymphoblastoid Cell Lines
by Edwin Choy & Roman Yelensky & Sasha Bonakdar & Robert M Plenge & Richa Saxena & Philip L De Jager & Stanley Y Shaw & Cara S Wolfish & Jacqueline M Slavik & Chris Cotsapas & Manuel Rivas & Emmanouil T Dermitzakis & Ellen Cahir-McFarland & Elliott Kieff & David Hafler & Mark J Daly & David Altshuler
October 2008, Volume 4, Issue 10
- 1-11 Efficient and Accurate Construction of Genetic Linkage Maps from the Minimum Spanning Tree of a Graph
by Yonghui Wu & Prasanna R Bhat & Timothy J Close & Stefano Lonardi
September 2008, Volume 4, Issue 9
- 1-6 A Review of Family-Based Tests for Linkage Disequilibrium between a Quantitative Trait and a Genetic Marker
by Warren J Ewens & Mingyao Li & Richard S Spielman - 1-10 Screening and Replication using the Same Data Set: Testing Strategies for Family-Based Studies in which All Probands Are Affected
by Amy Murphy & Scott T Weiss & Christoph Lange
August 2008, Volume 4, Issue 8
- 1-3 A Tribute to Evgenii V. Ananiev, 1947–2008
by Sergei M Mirkin - 1-9 Linkage Disequilibrium-Based Quality Control for Large-Scale Genetic Studies
by Paul Scheet & Matthew Stephens - 1-19 Identification and Functional Analysis of Light-Responsive Unique Genes and Gene Family Members in Rice
by Ki-Hong Jung & Jinwon Lee & Chris Dardick & Young-Su Seo & Peijian Cao & Patrick Canlas & Jirapa Phetsom & Xia Xu & Shu Ouyang & Kyungsook An & Yun-Ja Cho & Geun-Cheol Lee & Yoosook Lee & Gynheung An & Pamela C Ronald
July 2008, Volume 4, Issue 7
- 1-8 Simultaneous Analysis of All SNPs in Genome-Wide and Re-Sequencing Association Studies
by Clive J Hoggart & John C Whittaker & Maria De Iorio & David J Balding - 1-9 An Integrated Approach for the Analysis of Biological Pathways using Mixed Models
by Lily Wang & Bing Zhang & Russell D Wolfinger & Xi Chen - 1-13 Tracing Sub-Structure in the European American Population with PCA-Informative Markers
by Peristera Paschou & Petros Drineas & Jamey Lewis & Caroline M Nievergelt & Deborah A Nickerson & Joshua D Smith & Paul M Ridker & Daniel I Chasman & Ronald M Krauss & Elad Ziv - 1-14 Zebrafish Whole-Adult-Organism Chemogenomics for Large-Scale Predictive and Discovery Chemical Biology
by Siew Hong Lam & Sinnakarupan Mathavan & Yan Tong & Haixia Li & R Krishna Murthy Karuturi & Yilian Wu & Vinsensius B Vega & Edison T Liu & Zhiyuan Gong
June 2008, Volume 4, Issue 6
- 1-8 Evaluating Statistical Methods Using Plasmode Data Sets in the Age of Massive Public Databases: An Illustration Using False Discovery Rates
by Gary L Gadbury & Qinfang Xiang & Lin Yang & Stephen Barnes & Grier P Page & David B Allison - 1-17 A Large-Scale Rheumatoid Arthritis Genetic Study Identifies Association at Chromosome 9q33.2
by Monica Chang & Charles M Rowland & Veronica E Garcia & Steven J Schrodi & Joseph J Catanese & Annette H M van der Helm-van Mil & Kristin G Ardlie & Christopher I Amos & Lindsey A Criswell & Daniel L Kastner & Peter K Gregersen & Fina A S Kurreeman & Rene E M Toes & Tom W J Huizinga & Michael F Seldin & Ann B Begovich
February 2008, Volume 4, Issue 2
- 1-4 Ready for Her Close-Up: An Interview with Elaine Strass
by Jane Gitschier - 1-11 Notch Signalling Synchronizes the Zebrafish Segmentation Clock but Is Not Needed To Create Somite Boundaries
by Ertuğrul M Özbudak & Julian Lewis
January 2008, Volume 4, Issue 1
- 1-11 Analysis and Application of European Genetic Substructure Using 300 K SNP Information
by Chao Tian & Robert M Plenge & Michael Ransom & Annette Lee & Pablo Villoslada & Carlo Selmi & Lars Klareskog & Ann E Pulver & Lihong Qi & Peter K Gregersen & Michael F Seldin
December 2007, Volume 3, Issue 12
November 2007, Volume 3, Issue 11
- 1-12 AGEMAP: A Gene Expression Database for Aging in Mice
by Jacob M Zahn & Suresh Poosala & Art B Owen & Donald K Ingram & Ana Lustig & Arnell Carter & Ashani T Weeraratna & Dennis D Taub & Myriam Gorospe & Krystyna Mazan-Mamczarz & Edward G Lakatta & Kenneth R Boheler & Xiangru Xu & Mark P Mattson & Geppino Falco & Minoru S H Ko & David Schlessinger & Jeffrey Firman & Sarah K Kummerfeld & William H Wood III & Alan B Zonderman & Stuart K Kim & Kevin G Becker
October 2007, Volume 3, Issue 10
- 1-17 Regulatory Pathway Analysis by High-Throughput In Situ Hybridization
by Axel Visel & James Carson & Judit Oldekamp & Marei Warnecke & Vladimira Jakubcakova & Xunlei Zhou & Chad A Shaw & Gonzalo Alvarez-Bolado & Gregor Eichele
September 2007, Volume 3, Issue 9
- 1-9 Linkage Analysis of a Model Quantitative Trait in Humans: Finger Ridge Count Shows Significant Multivariate Linkage to 5q14.1
by Sarah E Medland & Danuta Z Loesch & Bogdan Mdzewski & Gu Zhu & Grant W Montgomery & Nicholas G Martin - 1-12 Capturing Heterogeneity in Gene Expression Studies by Surrogate Variable Analysis
by Jeffrey T Leek & John D Storey - 1-15 Adaptive Evolution of Conserved Noncoding Elements in Mammals
by Su Yeon Kim & Jonathan K Pritchard - 1-15 Gene Expression Programs of Human Smooth Muscle Cells: Tissue-Specific Differentiation and Prognostic Significance in Breast Cancers
by Jen-Tsan Chi & Edwin H Rodriguez & Zhen Wang & Dimitry S A Nuyten & Sayan Mukherjee & Matt van de Rijn & Marc J van de Vijver & Trevor Hastie & Patrick O Brown - 1-15 PCA-Correlated SNPs for Structure Identification in Worldwide Human Populations
by Peristera Paschou & Elad Ziv & Esteban G Burchard & Shweta Choudhry & William Rodriguez-Cintron & Michael W Mahoney & Petros Drineas
August 2007, Volume 3, Issue 8
- 1-23 Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays
by Mitchell Guttman & Carolyn Mies & Katarzyna Dudycz-Sulicz & Sharon J Diskin & Don A Baldwin & Christian J Stoeckert Jr. & Gregory R Grant
June 2007, Volume 3, Issue 6
- 1-12 A Genomic Pathway Approach to a Complex Disease: Axon Guidance and Parkinson Disease
by Timothy G Lesnick & Spiridon Papapetropoulos & Deborah C Mash & Jarlath Ffrench-Mullen & Lina Shehadeh & Mariza de Andrade & John R Henley & Walter A Rocca & J Eric Ahlskog & Demetrius M Maraganore
May 2007, Volume 3, Issue 5
- 1-9 A Method to Address Differential Bias in Genotyping in Large-Scale Association Studies
by Vincent Plagnol & Jason D Cooper & John A Todd & David G Clayton - 1-11 Allele-Specific Chromatin Immunoprecipitation Studies Show Genetic Influence on Chromatin State in Human Genome
by Mitsutaka Kadota & Howard H Yang & Nan Hu & Chaoyu Wang & Ying Hu & Philip R Taylor & Kenneth H Buetow & Maxwell P Lee
April 2007, Volume 3, Issue 4
- 1-10 Genetic Structure of Chimpanzee Populations
by Celine Becquet & Nick Patterson & Anne C Stone & Molly Przeworski & David Reich - 1-12 Generalized Analysis of Molecular Variance
by Caroline M Nievergelt & Ondrej Libiger & Nicholas J Schork
March 2007, Volume 3, Issue 3
- 1-10 Incorporating Single-Locus Tests into Haplotype Cladistic Analysis in Case-Control Studies
by Jianfeng Liu & Chris Papasian & Hong-Wen Deng
December 2006, Volume 2, Issue 12
- 1-15 Soft Sweeps III: The Signature of Positive Selection from Recurrent Mutation
by Pleuni S Pennings & Joachim Hermisson - 1-20 Population Structure and Eigenanalysis
by Nick Patterson & Alkes L Price & David Reich
November 2006, Volume 2, Issue 11
- 1-2 Authors' Reply
by Erik van Nimwegen & Mihaela Zavolan
August 2006, Volume 2, Issue 8
- 1-9 Family-Based versus Unrelated Case-Control Designs for Genetic Associations
by Evangelos Evangelou & Thomas A Trikalinos & Georgia Salanti & John P A Ioannidis - 1-11 Are Molecular Haplotypes Worth the Time and Expense? A Cost-Effective Method for Applying Molecular Haplotypes
by Mark A Levenstien & Jürg Ott & Derek Gordon
July 2006, Volume 2, Issue 7
- 1-8 Possible Ancestral Structure in Human Populations
by Vincent Plagnol & Jeffrey D Wall - 1-12 Structural Model Analysis of Multiple Quantitative Traits
by Renhua Li & Shirng-Wern Tsaih & Keith Shockley & Ioannis M Stylianou & Jon Wergedal & Beverly Paigen & Gary A Churchill - 1-13 Anatomic Demarcation by Positional Variation in Fibroblast Gene Expression Programs
by John L Rinn & Chanda Bondre & Hayes B Gladstone & Patrick O Brown & Howard Y Chang
June 2006, Volume 2, Issue 6
- 1-4 The Making of a President: An Interview with Shirley Tilghman
by Jane Gitschier
May 2006, Volume 2, Issue 5
- 1-11 High-Resolution Recombination Patterns in a Region of Human Chromosome 21 Measured by Sperm Typing
by Irene Tiemann-Boege & Peter Calabrese & David M Cochran & Rebecca Sokol & Norman Arnheim
April 2006, Volume 2, Issue 4
- 1-13 Mice and Men: Their Promoter Properties
by Vladimir B Bajic & Sin Lam Tan & Alan Christoffels & Christian Schönbach & Leonard Lipovich & Liang Yang & Oliver Hofmann & Adele Kruger & Winston Hide & Chikatoshi Kai & Jun Kawai & David A Hume & Piero Carninci & Yoshihide Hayashizaki
March 2006, Volume 2, Issue 3
- 1-10 CpG Island Methylation in Human Lymphocytes Is Highly Correlated with DNA Sequence, Repeats, and Predicted DNA Structure
by Christoph Bock & Martina Paulsen & Sascha Tierling & Thomas Mikeska & Thomas Lengauer & Jörn Walter - 1-13 The Dictyostelium Kinome—Analysis of the Protein Kinases from a Simple Model Organism
by Jonathan M Goldberg & Gerard Manning & Allen Liu & Petra Fey & Karen E Pilcher & Yanji Xu & Janet L Smith
February 2006, Volume 2, Issue 2
- 1-7 DNA Sequences Shaped by Selection for Stability
by Martin Ackermann & Lin Chao - 1-12 An Integrated Strategy for Analyzing the Unique Developmental Programs of Different Myoblast Subtypes
by Beatriz Estrada & Sung E Choe & Stephen S Gisselbrecht & Sebastien Michaud & Lakshmi Raj & Brian W Busser & Marc S Halfon & George M Church & Alan M Michelson
December 2005, Volume 1, Issue 6
- 1-1 Species Choice for Comparative Genomics: Being Greedy Works
by Fabio Pardi & Nick Goldman - 1-12 Clines, Clusters, and the Effect of Study Design on the Inference of Human Population Structure
by Noah A Rosenberg & Saurabh Mahajan & Sohini Ramachandran & Chengfeng Zhao & Jonathan K Pritchard & Marcus W Feldman
July 2005, Volume 1, Issue 1
- 1-1 Diversity of Flowering Responses in Wild Arabidopsis thaliana Strains
by Janne Lempe & Sureshkumar Balasubramanian & Sridevi Sureshkumar & Anandita Singh & Markus Schmid & Detlef Weigel