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A bioenergetics-based population dynamics model of Pacific herring (Clupea harengus pallasi) coupled to a lower trophic level nutrient–phytoplankton–zooplankton model: Description, calibration, and sensitivity analysis

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  1. Libralato, Simone & Solidoro, Cosimo, 2009. "Bridging biogeochemical and food web models for an End-to-End representation of marine ecosystem dynamics: The Venice lagoon case study," Ecological Modelling, Elsevier, vol. 220(21), pages 2960-2971.
  2. Xue, Huijie & Incze, Lewis & Xu, Danya & Wolff, Nicholas & Pettigrew, Neal, 2008. "Connectivity of lobster populations in the coastal Gulf of Maine," Ecological Modelling, Elsevier, vol. 210(1), pages 193-211.
  3. Kishi, Michio J. & Kashiwai, Makoto & Ware, Daniel M. & Megrey, Bernard A. & Eslinger, David L. & Werner, Francisco E. & Noguchi-Aita, Maki & Azumaya, Tomonori & Fujii, Masahiko & Hashimoto, Shinji & , 2007. "NEMURO—a lower trophic level model for the North Pacific marine ecosystem," Ecological Modelling, Elsevier, vol. 202(1), pages 12-25.
  4. Kakehi, Shigeho & Abo, Jun-ichi & Miyamoto, Hiroomi & Fuji, Taiki & Watanabe, Kazuyoshi & Yamashita, Hideyuki & Suyama, Satoshi, 2020. "Forecasting Pacific saury (Cololabis saira) fishing grounds off Japan using a migration model driven by an ocean circulation model," Ecological Modelling, Elsevier, vol. 431(C).
  5. Batchelder, Harold P. & Kashiwai, Makoto, 2007. "Ecosystem modeling with NEMURO within the PICES Climate Change and Carrying Capacity program," Ecological Modelling, Elsevier, vol. 202(1), pages 7-11.
  6. Wen-Cheng Liu & Hong-Ming Liu & Rita Sau-Wai Yam, 2021. "A Three-Dimensional Coupled Hydrodynamic-Ecological Modeling to Assess the Planktonic Biomass in a Subalpine Lake," Sustainability, MDPI, vol. 13(22), pages 1-22, November.
  7. Hamza, Faseela & M, Anju & Valsala, Vinu & R, Smitha B., 2021. "A bioenergetics model for seasonal growth of Indian oil sardine (Sardinella longiceps) in the Indian west coast," Ecological Modelling, Elsevier, vol. 456(C).
  8. Travers, M. & Shin, Y.-J. & Jennings, S. & Machu, E. & Huggett, J.A. & Field, J.G. & Cury, P.M., 2009. "Two-way coupling versus one-way forcing of plankton and fish models to predict ecosystem changes in the Benguela," Ecological Modelling, Elsevier, vol. 220(21), pages 3089-3099.
  9. Werner, Francisco E. & Ito, Shin-Ichi & Megrey, Bernard A. & Kishi, Michio J., 2007. "Synthesis of the NEMURO model studies and future directions of marine ecosystem modeling," Ecological Modelling, Elsevier, vol. 202(1), pages 211-223.
  10. Castellani, Marco & Rosland, Rune & Urtizberea, Agurtzane & Fiksen, Øyvind, 2013. "A mass-balanced pelagic ecosystem model with size-structured behaviourally adaptive zooplankton and fish," Ecological Modelling, Elsevier, vol. 251(C), pages 54-63.
  11. Kearney, Kelly A. & Stock, Charles & Aydin, Kerim & Sarmiento, Jorge L., 2012. "Coupling planktonic ecosystem and fisheries food web models for a pelagic ecosystem: Description and validation for the subarctic Pacific," Ecological Modelling, Elsevier, vol. 237, pages 43-62.
  12. Ito, Shin-Ichi & Megrey, Bernard A. & Kishi, Michio J. & Mukai, Daiki & Kurita, Yutaka & Ueno, Yasuhiro & Yamanaka, Yasuhiro, 2007. "On the interannual variability of the growth of Pacific saury (Cololabis saira): A simple 3-box model using NEMURO.FISH," Ecological Modelling, Elsevier, vol. 202(1), pages 174-183.
  13. Martins, Irene & Colaço, Ana & Dando, Paul R. & Martins, Inês & Desbruyères, Daniel & Sarradin, Pierre-Marie & Marques, João Carlos & Serrão-Santos, Ricardo, 2008. "Size-dependent variations on the nutritional pathway of Bathymodiolus azoricus demonstrated by a C-flux model," Ecological Modelling, Elsevier, vol. 217(1), pages 59-71.
  14. Mukai, Daiki & Kishi, Michio J. & Ito, Shin-ichi & Kurita, Yutaka, 2007. "The importance of spawning season on the growth of Pacific saury: A model-based study using NEMURO.FISH," Ecological Modelling, Elsevier, vol. 202(1), pages 165-173.
  15. Hashioka, Taketo & Yamanaka, Yasuhiro, 2007. "Ecosystem change in the western North Pacific associated with global warming using 3D-NEMURO," Ecological Modelling, Elsevier, vol. 202(1), pages 95-104.
  16. Carroll, Rosemary W.H. & Warwick, John J., 2017. "The importance of dynamic mercury water column concentrations on body burdens in a planktivorous fish: A bioenergetic and mercury mass balance perspective," Ecological Modelling, Elsevier, vol. 364(C), pages 66-76.
  17. Pethybridge, H. & Roos, D. & Loizeau, V. & Pecquerie, L. & Bacher, C., 2013. "Responses of European anchovy vital rates and population growth to environmental fluctuations: An individual-based modeling approach," Ecological Modelling, Elsevier, vol. 250(C), pages 370-383.
  18. Megrey, Bernard A. & Rose, Kenneth A. & Ito, Shin-ichi & Hay, Douglas E. & Werner, Francisco E. & Yamanaka, Yasuhiro & Aita, Maki Noguchi, 2007. "North Pacific basin-scale differences in lower and higher trophic level marine ecosystem responses to climate impacts using a nutrient-phytoplankton–zooplankton model coupled to a fish bioenergetics m," Ecological Modelling, Elsevier, vol. 202(1), pages 196-210.
  19. Deslauriers, David & Heironimus, Laura B. & Chipps, Steven R., 2016. "Test of a foraging-bioenergetics model to evaluate growth dynamics of endangered pallid sturgeon (Scaphirhynchus albus)," Ecological Modelling, Elsevier, vol. 336(C), pages 1-12.
  20. Dalyander, P. Soupy & Cerco, Carl F., 2010. "Integration of a fish bioenergetics model into a spatially explicit water quality model: Application to menhaden in Chesapeake Bay," Ecological Modelling, Elsevier, vol. 221(16), pages 1922-1933.
  21. Castellani, Marco & Våge, Selina & Strand, Espen & Thingstad, T. Frede & Giske, Jarl, 2013. "The Scaled Subspaces Method: A new trait-based approach to model communities of populations with largely inhomogeneous density," Ecological Modelling, Elsevier, vol. 251(C), pages 173-186.
  22. Anne Hollowed & Enrique Curchitser & Charles Stock & Chang Zhang, 2013. "Trade-offs associated with different modeling approaches for assessment of fish and shellfish responses to climate change," Climatic Change, Springer, vol. 119(1), pages 111-129, July.
  23. Gurkan, Zeren & Christensen, Asbjørn & Maar, Marie & Møller, Eva Friis & Madsen, Kristine Skovgaard & Munk, Peter & Mosegaard, Henrik, 2013. "Spatio-temporal dynamics of growth and survival of Lesser Sandeel early life-stages in the North Sea: Predictions from a coupled individual-based and hydrodynamic–biogeochemical model," Ecological Modelling, Elsevier, vol. 250(C), pages 294-306.
  24. Frisk, C. & Andersen, K.H. & Temming, A. & Herrmann, J.P. & Madsen, K.S. & Kraus, G., 2015. "Environmental effects on sprat (Sprattus sprattus) physiology and growth at the distribution frontier: A bioenergetic modelling approach," Ecological Modelling, Elsevier, vol. 299(C), pages 130-139.
  25. Rose, Kenneth A. & Werner, Francisco E. & Megrey, Bernard A. & Aita, Maki Noguchi & Yamanaka, Yasuhiro & Hay, Douglas E. & Schweigert, Jake F. & Foster, Matthew Birch, 2007. "Simulated herring growth responses in the Northeastern Pacific to historic temperature and zooplankton conditions generated by the 3-dimensional NEMURO nutrient–phytoplankton–zooplankton model," Ecological Modelling, Elsevier, vol. 202(1), pages 184-195.
  26. Yoshie, Naoki & Yamanaka, Yasuhiro & Rose, Kenneth A. & Eslinger, David L. & Ware, Daniel M. & Kishi, Michio J., 2007. "Parameter sensitivity study of the NEMURO lower trophic level marine ecosystem model," Ecological Modelling, Elsevier, vol. 202(1), pages 26-37.
  27. Zouiten, Hala & Díaz, César Álvarez & Gómez, Andrés García & Cortezón, José Antonio Revilla & Alba, Javier García, 2013. "An advanced tool for eutrophication modeling in coastal lagoons: Application to the Victoria lagoon in the north of Spain," Ecological Modelling, Elsevier, vol. 265(C), pages 99-113.
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