IDEAS home Printed from https://ideas.repec.org/a/plo/pone00/0169787.html
   My bibliography  Save this article

Turning Simulation into Estimation: Generalized Exchange Algorithms for Exponential Family Models

Author

Listed:
  • Maarten Marsman
  • Gunter Maris
  • Timo Bechger
  • Cees Glas

Abstract

The Single Variable Exchange algorithm is based on a simple idea; any model that can be simulated can be estimated by producing draws from the posterior distribution. We build on this simple idea by framing the Exchange algorithm as a mixture of Metropolis transition kernels and propose strategies that automatically select the more efficient transition kernels. In this manner we achieve significant improvements in convergence rate and autocorrelation of the Markov chain without relying on more than being able to simulate from the model. Our focus will be on statistical models in the Exponential Family and use two simple models from educational measurement to illustrate the contribution.

Suggested Citation

  • Maarten Marsman & Gunter Maris & Timo Bechger & Cees Glas, 2017. "Turning Simulation into Estimation: Generalized Exchange Algorithms for Exponential Family Models," PLOS ONE, Public Library of Science, vol. 12(1), pages 1-15, January.
  • Handle: RePEc:plo:pone00:0169787
    DOI: 10.1371/journal.pone.0169787
    as

    Download full text from publisher

    File URL: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0169787
    Download Restriction: no

    File URL: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0169787&type=printable
    Download Restriction: no

    File URL: https://libkey.io/10.1371/journal.pone.0169787?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. J. Møller & A. N. Pettitt & R. Reeves & K. K. Berthelsen, 2006. "An efficient Markov chain Monte Carlo method for distributions with intractable normalising constants," Biometrika, Biometrika Trust, vol. 93(2), pages 451-458, June.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Rajala, T. & Penttinen, A., 2014. "Bayesian analysis of a Gibbs hard-core point pattern model with varying repulsion range," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 530-541.
    2. Laleh Tafakori & Armin Pourkhanali & Riccardo Rastelli, 2022. "Measuring systemic risk and contagion in the European financial network," Empirical Economics, Springer, vol. 63(1), pages 345-389, July.
    3. Del Negro, Marco & Schorfheide, Frank, 2008. "Forming priors for DSGE models (and how it affects the assessment of nominal rigidities)," Journal of Monetary Economics, Elsevier, vol. 55(7), pages 1191-1208, October.
    4. Bee, Marco & Benedetti, Roberto & Espa, Giuseppe, 2017. "Approximate maximum likelihood estimation of the Bingham distribution," Computational Statistics & Data Analysis, Elsevier, vol. 108(C), pages 84-96.
    5. Luigi Spezia, 2019. "Modelling covariance matrices by the trigonometric separation strategy with application to hidden Markov models," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(2), pages 399-422, June.
    6. James C. Russell & Ephraim M. Hanks & Murali Haran, 2016. "Dynamic Models of Animal Movement with Spatial Point Process Interactions," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 21(1), pages 22-40, March.
    7. Solaiman Afroughi & Soghrat Faghihzadeh & Majid Jafari Khaledi & Mehdi Ghandehari Motlagh & Ebrahim Hajizadeh, 2011. "Analysis of clustered spatially correlated binary data using autologistic model and Bayesian method with an application to dental caries of 3--5-year-old children," Journal of Applied Statistics, Taylor & Francis Journals, vol. 38(12), pages 2763-2774, February.
    8. Max J. Pachali & Peter Kurz & Thomas Otter, 2020. "How to generalize from a hierarchical model?," Quantitative Marketing and Economics (QME), Springer, vol. 18(4), pages 343-380, December.
    9. Michael L. Stein, 2021. "A parametric model for distributions with flexible behavior in both tails," Environmetrics, John Wiley & Sons, Ltd., vol. 32(2), March.
    10. Tetyana Kosyakova & Thomas Otter & Sanjog Misra & Christian Neuerburg, 2020. "Exact MCMC for Choices from Menus—Measuring Substitution and Complementarity Among Menu Items," Marketing Science, INFORMS, vol. 39(2), pages 427-447, March.
    11. Jonathan U Harrison & Ruth E Baker, 2020. "An automatic adaptive method to combine summary statistics in approximate Bayesian computation," PLOS ONE, Public Library of Science, vol. 15(8), pages 1-21, August.
    12. C Rohrbeck & D A Costain & A Frigessi, 2018. "Bayesian spatial monotonic multiple regression," Biometrika, Biometrika Trust, vol. 105(3), pages 691-707.
    13. Lombardi, Marco J. & Nicoletti, Giulio, 2012. "Bayesian prior elicitation in DSGE models: Macro- vs micropriors," Journal of Economic Dynamics and Control, Elsevier, vol. 36(2), pages 294-313.
    14. Park, Jaewoo & Jin, Ick Hoon & Schweinberger, Michael, 2022. "Bayesian model selection for high-dimensional Ising models, with applications to educational data," Computational Statistics & Data Analysis, Elsevier, vol. 165(C).
    15. repec:dau:papers:123456789/5724 is not listed on IDEAS
    16. Jieying Jiao & Guanyu Hu & Jun Yan, 2021. "Heterogeneity pursuit for spatial point pattern with application to tree locations: A Bayesian semiparametric recourse," Environmetrics, John Wiley & Sons, Ltd., vol. 32(7), November.
    17. Johan Koskinen & Galina Daraganova, 2022. "Bayesian analysis of social influence," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 185(4), pages 1855-1881, October.
    18. Shen, Yunyi & Olson, Erik R. & Van Deelen, Timothy R., 2021. "Spatially explicit modeling of community occupancy using Markov Random Field models with imperfect observation: Mesocarnivores in Apostle Islands National Lakeshore," Ecological Modelling, Elsevier, vol. 459(C).
    19. Cécile Hardouin & Xavier Guyon, 2014. "Recursions on the marginals and exact computation of the normalizing constant for Gibbs processes," Computational Statistics, Springer, vol. 29(6), pages 1637-1650, December.
    20. Chen, Jiaxun & Micheas, Athanasios C. & Holan, Scott H., 2022. "Hierarchical Bayesian modeling of spatio-temporal area-interaction processes," Computational Statistics & Data Analysis, Elsevier, vol. 167(C).
    21. Donatello Telesca & Peter Müller & Steven M. Kornblau & Marc A. Suchard & Yuan Ji, 2012. "Modeling Protein Expression and Protein Signaling Pathways," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(500), pages 1372-1384, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:plo:pone00:0169787. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: plosone (email available below). General contact details of provider: https://journals.plos.org/plosone/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.