IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-49840-7.html
   My bibliography  Save this article

Phage predation accelerates the spread of plasmid-encoded antibiotic resistance

Author

Listed:
  • Chujin Ruan

    (China Agricultural University
    Swiss Federal Institute of Aquatic Science and Technology (Eawag))

  • Josep Ramoneda

    (Center for Advanced Studies of Blanes (CEAB)
    University of Colorado)

  • Anton Kan

    (Swiss Federal Institute of Technology (ETH))

  • Timothy J. Rudge

    (Newcastle University)

  • Gang Wang

    (China Agricultural University
    China Agricultural University)

  • David R. Johnson

    (Swiss Federal Institute of Aquatic Science and Technology (Eawag)
    University of Bern)

Abstract

Phage predation is generally assumed to reduce microbial proliferation while not contributing to the spread of antibiotic resistance. However, this assumption does not consider the effect of phage predation on the spatial organization of different microbial populations. Here, we show that phage predation can increase the spread of plasmid-encoded antibiotic resistance during surface-associated microbial growth by reshaping spatial organization. Using two strains of the bacterium Escherichia coli, we demonstrate that phage predation slows the spatial segregation of the strains during growth. This increases the number of cell-cell contacts and the extent of conjugation-mediated plasmid transfer between them. The underlying mechanism is that phage predation shifts the location of fastest growth from the biomass periphery to the interior where cells are densely packed and aligned closer to parallel with each other. This creates straighter interfaces between the strains that are less likely to merge together during growth, consequently slowing the spatial segregation of the strains and enhancing plasmid transfer between them. Our results have implications for the design and application of phage therapy and reveal a mechanism for how microbial functions that are deleterious to human and environmental health can proliferate in the absence of positive selection.

Suggested Citation

  • Chujin Ruan & Josep Ramoneda & Anton Kan & Timothy J. Rudge & Gang Wang & David R. Johnson, 2024. "Phage predation accelerates the spread of plasmid-encoded antibiotic resistance," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-49840-7
    DOI: 10.1038/s41467-024-49840-7
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-49840-7
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-49840-7?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Tim N. Enke & Gabriel E. Leventhal & Matthew Metzger & José T. Saavedra & Otto X. Cordero, 2018. "Microscale ecology regulates particulate organic matter turnover in model marine microbial communities," Nature Communications, Nature, vol. 9(1), pages 1-8, December.
    2. Charlotte Brives & Jessica Pourraz, 2020. "Phage therapy as a potential solution in the fight against AMR: obstacles and possible futures," Palgrave Communications, Palgrave Macmillan, vol. 6(1), pages 1-11, December.
    3. Yinyin Ma & Josep Ramoneda & David R. Johnson, 2023. "Timing of antibiotic administration determines the spread of plasmid-encoded antibiotic resistance during microbial range expansion," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    4. Bryan T Weinstein & Maxim O Lavrentovich & Wolfram Möbius & Andrew W Murray & David R Nelson, 2017. "Genetic drift and selection in many-allele range expansions," PLOS Computational Biology, Public Library of Science, vol. 13(12), pages 1-31, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Serhii Aif & Nico Appold & Lucas Kampman & Oskar Hallatschek & Jona Kayser, 2022. "Evolutionary rescue of resistant mutants is governed by a balance between radial expansion and selection in compact populations," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
    2. Rebecca Conners & Mathew McLaren & Urszula Łapińska & Kelly Sanders & M. Rhia L. Stone & Mark A. T. Blaskovich & Stefano Pagliara & Bertram Daum & Jasna Rakonjac & Vicki A. M. Gold, 2021. "CryoEM structure of the outer membrane secretin channel pIV from the f1 filamentous bacteriophage," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    3. Mohammad Bahadori & Chengrong Chen & Stephen Lewis & Juntao Wang & Jupei Shen & Enqing Hou & Mehran Rezaei Rashti & Qiaoyun Huang & Zoe Bainbridge & Tom Stevens, 2023. "The origin of suspended particulate matter in the Great Barrier Reef," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    4. Wen-Xin Jiang & Ping-Yi Li & Xiu-Lan Chen & Yi-Shuo Zhang & Jing-Ping Wang & Yan-Jun Wang & Qi Sheng & Zhong-Zhi Sun & Qi-Long Qin & Xue-Bing Ren & Peng Wang & Xiao-Yan Song & Yin Chen & Yu-Zhong Zhan, 2022. "A pathway for chitin oxidation in marine bacteria," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    5. Trang T. H. Nguyen & Emily J. Zakem & Ali Ebrahimi & Julia Schwartzman & Tolga Caglar & Kapil Amarnath & Uria Alcolombri & François J. Peaudecerf & Terence Hwa & Roman Stocker & Otto X. Cordero & Naom, 2022. "Microbes contribute to setting the ocean carbon flux by altering the fate of sinking particulates," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
    6. Yichao Wu & Chengxia Fu & Caroline L. Peacock & Søren J. Sørensen & Marc A. Redmile-Gordon & Ke-Qing Xiao & Chunhui Gao & Jun Liu & Qiaoyun Huang & Zixue Li & Peiyi Song & Yongguan Zhu & Jizhong Zhou , 2023. "Cooperative microbial interactions drive spatial segregation in porous environments," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    7. Fondi, Marco & Di Patti, Francesca, 2019. "A synthetic ecosystem for the multi-level modelling of heterotroph-phototroph metabolic interactions," Ecological Modelling, Elsevier, vol. 399(C), pages 13-22.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-49840-7. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.