Ongoing shuffling of protein fragments diversifies core viral functions linked to interactions with bacterial hosts
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-023-43236-9
Download full text from publisher
References listed on IDEAS
- Ruochen Ouyang & Ana Rita Costa & C. Keith Cassidy & Aleksandra Otwinowska & Vera C. J. Williams & Agnieszka Latka & Phill J. Stansfeld & Zuzanna Drulis-Kawa & Yves Briers & Daniël M. Pelt & Stan J. J, 2022. "High-resolution reconstruction of a Jumbo-bacteriophage infecting capsulated bacteria using hyperbranched tail fibers," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
- Florian Tesson & Alexandre Hervé & Ernest Mordret & Marie Touchon & Camille d’Humières & Jean Cury & Aude Bernheim, 2022. "Systematic and quantitative view of the antiviral arsenal of prokaryotes," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
- Leland H. Hartwell & John J. Hopfield & Stanislas Leibler & Andrew W. Murray, 1999. "From molecular to modular cell biology," Nature, Nature, vol. 402(6761), pages 47-52, December.
- Richard E. Lenski & Charles Ofria & Robert T. Pennock & Christoph Adami, 2003. "The evolutionary origin of complex features," Nature, Nature, vol. 423(6936), pages 139-144, May.
- Susanne Meile & Jiemin Du & Samuel Staubli & Sebastian Grossmann & Hendrik Koliwer-Brandl & Pietro Piffaretti & Lorenz Leitner & Cassandra I. Matter & Jasmin Baggenstos & Laura Hunold & Sonja Milek & , 2023. "Engineered reporter phages for detection of Escherichia coli, Enterococcus, and Klebsiella in urine," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Tracy Chih-Ting Koubkova-Yu & Jung-Chi Chao & Jun-Yi Leu, 2018. "Heterologous Hsp90 promotes phenotypic diversity through network evolution," PLOS Biology, Public Library of Science, vol. 16(11), pages 1-29, November.
- T. Ochiai & J. C. Nacher, 2007. "Stochastic analysis of autoregulatory gene expression dynamics," Mathematical and Computer Modelling of Dynamical Systems, Taylor & Francis Journals, vol. 14(4), pages 377-388, November.
- Dimitris Iliopoulos & Arend Hintze & Christoph Adami, 2010. "Critical Dynamics in the Evolution of Stochastic Strategies for the Iterated Prisoner's Dilemma," PLOS Computational Biology, Public Library of Science, vol. 6(10), pages 1-8, October.
- Danielle Miller & Adi Stern & David Burstein, 2022. "Deciphering microbial gene function using natural language processing," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
- Frederic Li Mow Chee & Bruno Beernaert & Billie G. C. Griffith & Alexander E. P. Loftus & Yatendra Kumar & Jimi C. Wills & Martin Lee & Jessica Valli & Ann P. Wheeler & J. Douglas Armstrong & Maddy Pa, 2023. "Mena regulates nesprin-2 to control actin–nuclear lamina associations, trans-nuclear membrane signalling and gene expression," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
- Joshua S Weitz & Philip N Benfey & Ned S Wingreen, 2007. "Evolution, Interactions, and Biological Networks," PLOS Biology, Public Library of Science, vol. 5(1), pages 1-3, January.
- Bo Xu & Hongfei Lin & Yang Chen & Zhihao Yang & Hongfang Liu, 2013. "Protein Complex Identification by Integrating Protein-Protein Interaction Evidence from Multiple Sources," PLOS ONE, Public Library of Science, vol. 8(12), pages 1-12, December.
- Angelina Beavogui & Auriane Lacroix & Nicolas Wiart & Julie Poulain & Tom O. Delmont & Lucas Paoli & Patrick Wincker & Pedro H. Oliveira, 2024. "The defensome of complex bacterial communities," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
- Robrecht Cannoodt & Joeri Ruyssinck & Jan Ramon & Katleen De Preter & Yvan Saeys, 2018. "IncGraph: Incremental graphlet counting for topology optimisation," PLOS ONE, Public Library of Science, vol. 13(4), pages 1-11, April.
- Margaritis Voliotis & Philipp Thomas & Ramon Grima & Clive G Bowsher, 2016. "Stochastic Simulation of Biomolecular Networks in Dynamic Environments," PLOS Computational Biology, Public Library of Science, vol. 12(6), pages 1-18, June.
- Cui, Xue-Mei & Yoon, Chang No & Youn, Hyejin & Lee, Sang Hoon & Jung, Jean S. & Han, Seung Kee, 2017. "Dynamic burstiness of word-occurrence and network modularity in textbook systems," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 487(C), pages 103-110.
- Miguel A Fortuna & Luis Zaman & Charles Ofria & Andreas Wagner, 2017. "The genotype-phenotype map of an evolving digital organism," PLOS Computational Biology, Public Library of Science, vol. 13(2), pages 1-20, February.
- Briscoe, Gerard & De Wilde, Philippe, 2011. "Physical complexity of variable length symbolic sequences," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 390(21), pages 3732-3741.
- Andrea Maesani & Pradeep Ruben Fernando & Dario Floreano, 2014. "Artificial Evolution by Viability Rather than Competition," PLOS ONE, Public Library of Science, vol. 9(1), pages 1-12, January.
- Mirzadeh Phirouzabadi, Amir & Savage, David & Blackmore, Karen & Juniper, James, 2020. "The evolution of dynamic interactions between the knowledge development of powertrain systems," Transport Policy, Elsevier, vol. 93(C), pages 1-16.
- Yongli Li & Chong Wu & Zizheng Wang, 2015. "An information-theoretic approach for detecting communities in networks," Quality & Quantity: International Journal of Methodology, Springer, vol. 49(4), pages 1719-1733, July.
- Anne Lopes & Sophie Sacquin-Mora & Viktoriya Dimitrova & Elodie Laine & Yann Ponty & Alessandra Carbone, 2013. "Protein-Protein Interactions in a Crowded Environment: An Analysis via Cross-Docking Simulations and Evolutionary Information," PLOS Computational Biology, Public Library of Science, vol. 9(12), pages 1-18, December.
- Sun, Lanfang & Jiang, Lu & Li, Menghui & He, Dacheng, 2006. "Statistical analysis of gene regulatory networks reconstructed from gene expression data of lung cancer," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 370(2), pages 663-671.
- Andriani, Pierpaolo & Carignani, Giuseppe, 2014. "Modular exaptation: A missing link in the synthesis of artificial form," Research Policy, Elsevier, vol. 43(9), pages 1608-1620.
- Deck, Cary & Sarangi, Sudipta & Wiser, Matt, 2017. "An experimental investigation of simultaneous multi-battle contests with strategic complementarities," Journal of Economic Psychology, Elsevier, vol. 63(C), pages 117-134.
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-43236-9. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.