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NULISA: a proteomic liquid biopsy platform with attomolar sensitivity and high multiplexing

Author

Listed:
  • Wei Feng

    (Alamar Biosciences, Inc)

  • Joanne C. Beer

    (Alamar Biosciences, Inc)

  • Qinyu Hao

    (Alamar Biosciences, Inc)

  • Ishara S. Ariyapala

    (Alamar Biosciences, Inc)

  • Aparna Sahajan

    (Alamar Biosciences, Inc)

  • Andrei Komarov

    (Alamar Biosciences, Inc)

  • Katie Cha

    (Alamar Biosciences, Inc)

  • Mason Moua

    (Alamar Biosciences, Inc)

  • Xiaolei Qiu

    (Alamar Biosciences, Inc)

  • Xiaomei Xu

    (Alamar Biosciences, Inc)

  • Shweta Iyengar

    (Alamar Biosciences, Inc)

  • Thu Yoshimura

    (Alamar Biosciences, Inc)

  • Rajini Nagaraj

    (Alamar Biosciences, Inc)

  • Li Wang

    (Alamar Biosciences, Inc)

  • Ming Yu

    (Alamar Biosciences, Inc)

  • Kate Engel

    (Alamar Biosciences, Inc)

  • Lucas Zhen

    (Alamar Biosciences, Inc)

  • Wen Xue

    (Alamar Biosciences, Inc)

  • Chen-jung Lee

    (Alamar Biosciences, Inc)

  • Chan Ho Park

    (Alamar Biosciences, Inc)

  • Cheng Peng

    (Alamar Biosciences, Inc)

  • Kaiyuan Zhang

    (Alamar Biosciences, Inc)

  • Adrian Grzybowski

    (Alamar Biosciences, Inc)

  • Johnnie Hahm

    (Alamar Biosciences, Inc)

  • Susanne V. Schmidt

    (University of Bonn)

  • Alexandru Odainic

    (University of Bonn
    University of Melbourne)

  • Jasper Spitzer

    (University of Bonn)

  • Kasun Buddika

    (Alamar Biosciences, Inc)

  • Dwight Kuo

    (Alamar Biosciences, Inc)

  • Lei Fang

    (Alamar Biosciences, Inc)

  • Bingqing Zhang

    (Alamar Biosciences, Inc)

  • Steve Chen

    (Alamar Biosciences, Inc)

  • Eicke Latz

    (University of Bonn
    Deutsches Rheuma-Forschungszentrum Berlin (DRFZ))

  • Yiyuan Yin

    (Alamar Biosciences, Inc)

  • Yuling Luo

    (Alamar Biosciences, Inc)

  • Xiao-Jun Ma

    (Alamar Biosciences, Inc)

Abstract

The blood proteome holds great promise for precision medicine but poses substantial challenges due to the low abundance of most plasma proteins and the vast dynamic range of the plasma proteome. Here we address these challenges with NUcleic acid Linked Immuno-Sandwich Assay (NULISA™), which improves the sensitivity of traditional proximity ligation assays by ~10,000-fold to attomolar level, by suppressing assay background via a dual capture and release mechanism built into oligonucleotide-conjugated antibodies. Highly multiplexed quantification of both low- and high-abundance proteins spanning a wide dynamic range is achieved by attenuating signals from abundant targets with unconjugated antibodies and next-generation sequencing of barcoded reporter DNA. A 200-plex NULISA containing 124 cytokines and chemokines and other proteins demonstrates superior sensitivity to a proximity extension assay in detecting biologically important low-abundance biomarkers in patients with autoimmune diseases and COVID-19. Fully automated NULISA makes broad and in-depth proteomic analysis easily accessible for research and diagnostic applications.

Suggested Citation

  • Wei Feng & Joanne C. Beer & Qinyu Hao & Ishara S. Ariyapala & Aparna Sahajan & Andrei Komarov & Katie Cha & Mason Moua & Xiaolei Qiu & Xiaomei Xu & Shweta Iyengar & Thu Yoshimura & Rajini Nagaraj & Li, 2023. "NULISA: a proteomic liquid biopsy platform with attomolar sensitivity and high multiplexing," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-42834-x
    DOI: 10.1038/s41467-023-42834-x
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