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Sparse inverse covariance selection with mass-nonlocal priors

Author

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  • Fagbohungbe, Taiwo
  • Zhang, Liangliang
  • Cao, Xuan

Abstract

To tackle the challenges of understanding complex multivariate relationships in high-dimensional settings, we develop a method for estimating the sparsity pattern of inverse covariance matrices. Our approach employs a generalized likelihood framework for scalable computation, integrating spike and slab priors with nonlocal slab components on the elements of the inverse covariance matrix. We implement the Bayesian model using an entry-wise Gibbs sampler and establish its theoretical consistency in high-dimensional settings under mild conditions. The practical utility of our method is demonstrated through extensive numerical studies and an application to neuropathy data analysis.

Suggested Citation

  • Fagbohungbe, Taiwo & Zhang, Liangliang & Cao, Xuan, 2025. "Sparse inverse covariance selection with mass-nonlocal priors," Statistics & Probability Letters, Elsevier, vol. 219(C).
  • Handle: RePEc:eee:stapro:v:219:y:2025:i:c:s0167715224003171
    DOI: 10.1016/j.spl.2024.110348
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    References listed on IDEAS

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    1. Banerjee, Sayantan & Ghosal, Subhashis, 2015. "Bayesian structure learning in graphical models," Journal of Multivariate Analysis, Elsevier, vol. 136(C), pages 147-162.
    2. Kshitij Khare & Sang-Yun Oh & Bala Rajaratnam, 2015. "A convex pseudolikelihood framework for high dimensional partial correlation estimation with convergence guarantees," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 77(4), pages 803-825, September.
    3. Shi, Guiling & Lim, Chae Young & Maiti, Tapabrata, 2019. "Model selection using mass-nonlocal prior," Statistics & Probability Letters, Elsevier, vol. 147(C), pages 36-44.
    4. Valen E. Johnson & David Rossell, 2012. "Bayesian Model Selection in High-Dimensional Settings," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(498), pages 649-660, June.
    5. Peng, Jie & Wang, Pei & Zhou, Nengfeng & Zhu, Ji, 2009. "Partial Correlation Estimation by Joint Sparse Regression Models," Journal of the American Statistical Association, American Statistical Association, vol. 104(486), pages 735-746.
    6. Jianqing Fan & Yuan Liao & Han Liu, 2016. "An overview of the estimation of large covariance and precision matrices," Econometrics Journal, Royal Economic Society, vol. 19(1), pages 1-32, February.
    7. Kyoungjae Lee & Xuan Cao, 2021. "Bayesian group selection in logistic regression with application to MRI data analysis," Biometrics, The International Biometric Society, vol. 77(2), pages 391-400, June.
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