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Order selection for regression-based hidden Markov model

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  • Lin, Yiqi
  • Song, Xinyuan

Abstract

Hidden Markov models (HMMs) describe the relationship between two stochastic processes: an observed process and an unobservable finite-state transition process. Owing to their modeling dynamic heterogeneity, HMMs are widely used to analyze heterogeneous longitudinal data. Traditional HMMs frequently assume that the number of hidden states (i.e., the order of HMM) is a constant and should be specified prior to analysis. This assumption is unrealistic and restrictive in many applications. In this study, we consider regression-based hidden Markov model (RHMM) while allowing the number of hidden states to be unknown and determined by the data. We propose a novel likelihood-based double penalized method, along with an efficient expectation-conditional maximization with iterative thresholding-based descent (ECM–ITD) algorithm, to perform order selection in the context of RHMM. An extended Group-Sort-Fuse procedure is proposed to rank the regression coefficients and impose penalties on the discrepancy of adjacent coefficients. The order selection consistency and convergence of the ECM–ITD algorithm are established under mild conditions. Simulation studies are conducted to evaluate the empirical performance of the proposed method. An application of the proposed methodology to a real-life study on Alzheimer’s disease is presented.

Suggested Citation

  • Lin, Yiqi & Song, Xinyuan, 2022. "Order selection for regression-based hidden Markov model," Journal of Multivariate Analysis, Elsevier, vol. 192(C).
  • Handle: RePEc:eee:jmvana:v:192:y:2022:i:c:s0047259x22000707
    DOI: 10.1016/j.jmva.2022.105061
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    References listed on IDEAS

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    1. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    2. Xinyuan Song & Yemao Xia & Hongtu Zhu, 2017. "Hidden Markov latent variable models with multivariate longitudinal data," Biometrics, The International Biometric Society, vol. 73(1), pages 313-323, March.
    3. Zhou, Jie & Song, Xinyuan & Sun, Liuquan, 2020. "Continuous time hidden Markov model for longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 179(C).
    4. Altman, Rachel MacKay, 2007. "Mixed Hidden Markov Models: An Extension of the Hidden Markov Model to the Longitudinal Data Setting," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 201-210, March.
    5. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    6. Hansheng Wang & Bo Li & Chenlei Leng, 2009. "Shrinkage tuning parameter selection with a diverging number of parameters," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 71(3), pages 671-683, June.
    7. Edward Ip & Qiang Zhang & Jack Rejeski & Tammy Harris & Stephen Kritchevsky, 2013. "Partially Ordered Mixed Hidden Markov Model for the Disablement Process of Older Adults," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(502), pages 370-384, June.
    8. She, Yiyuan, 2012. "An iterative algorithm for fitting nonconvex penalized generalized linear models with grouped predictors," Computational Statistics & Data Analysis, Elsevier, vol. 56(10), pages 2976-2990.
    9. Chen, Jiahua & Khalili, Abbas, 2009. "Order Selection in Finite Mixture Models With a Nonsmooth Penalty," Journal of the American Statistical Association, American Statistical Association, vol. 104(485), pages 187-196.
    10. Ying Hung & Yijie Wang & Veronika Zarnitsyna & Cheng Zhu & C. F. Jeff Wu, 2013. "Hidden Markov Models With Applications in Cell Adhesion Experiments," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(504), pages 1469-1479, December.
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    Cited by:

    1. María Luz Gámiz & Nikolaos Limnios & Mari Carmen Segovia-García, 2023. "The continuous-time hidden Markov model based on discretization. Properties of estimators and applications," Statistical Inference for Stochastic Processes, Springer, vol. 26(3), pages 525-550, October.

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