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Sensitivity analysis and Bayesian calibration for testing robustness of the BASGRA model in different environments

Author

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  • Hjelkrem, Anne-Grete Roer
  • Höglind, Mats
  • van Oijen, Marcel
  • Schellberg, Jürgen
  • Gaiser, Thomas
  • Ewert, Frank

Abstract

Proper parameterisation and quantification of model uncertainty are two essential tasks in improvement and assessment of model performance. Bayesian calibration is a method that combines both tasks by quantifying probability distributions for model parameters and outputs. However, the method is rarely applied to complex models because of its high computational demand when used with high-dimensional parameter spaces. We therefore combined Bayesian calibration with sensitivity analysis, using the screening method by Morris (1991), in order to reduce model complexity by fixing parameters to which model output was only weakly sensitive to a nominal value. Further, the robustness of the model with respect to reduction in the number of free parameters were examined according to model discrepancy and output uncertainty. The process-based grassland model BASGRA was examined in the present study on two sites in Norway and in Germany, for two grass species (Phleum pratense and Arrhenatherum elatius). According to this study, a reduction of free model parameters from 66 to 45 was possible. The sensitivity analysis showed that the parameters to be fixed were consistent across sites (which differed in climate and soil conditions), while model calibration had to be performed separately for each combination of site and species. The output uncertainty decreased slightly, but still covered the field observations of aboveground biomass. Considering the training data, the mean square error for both the 66 and the 45 parameter model was dominated by errors in timing (phase shift), whereas no general pattern was found in errors when using the validation data. Stronger model reduction should be avoided, as the error term increased and output uncertainty was underestimated.

Suggested Citation

  • Hjelkrem, Anne-Grete Roer & Höglind, Mats & van Oijen, Marcel & Schellberg, Jürgen & Gaiser, Thomas & Ewert, Frank, 2017. "Sensitivity analysis and Bayesian calibration for testing robustness of the BASGRA model in different environments," Ecological Modelling, Elsevier, vol. 359(C), pages 80-91.
  • Handle: RePEc:eee:ecomod:v:359:y:2017:i:c:p:80-91
    DOI: 10.1016/j.ecolmodel.2017.05.015
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    References listed on IDEAS

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    1. Confalonieri, R. & Bellocchi, G. & Bregaglio, S. & Donatelli, M. & Acutis, M., 2010. "Comparison of sensitivity analysis techniques: A case study with the rice model WARM," Ecological Modelling, Elsevier, vol. 221(16), pages 1897-1906.
    2. Oomen, Roelof J. & Ewert, Frank & Snyman, Hennie A., 2016. "Modelling rangeland productivity in response to degradation in a semi-arid climate," Ecological Modelling, Elsevier, vol. 322(C), pages 54-70.
    3. Campbell, Katherine, 2006. "Statistical calibration of computer simulations," Reliability Engineering and System Safety, Elsevier, vol. 91(10), pages 1358-1363.
    4. Marc C. Kennedy & Anthony O'Hagan, 2001. "Bayesian calibration of computer models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 63(3), pages 425-464.
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    Cited by:

    1. Hjelkrem, Anne-Grete Roer & Eikemo, Håvard & Le, Vinh Hong & Hermansen, Arne & Nærstad, Ragnhild, 2021. "A process-based model to forecast risk of potato late blight in Norway (The Nærstad model): model development, sensitivity analysis and Bayesian calibration," Ecological Modelling, Elsevier, vol. 450(C).
    2. Höglind, Mats & Cameron, David & Persson, Tomas & Huang, Xiao & van Oijen, Marcel, 2020. "BASGRA_N: A model for grassland productivity, quality and greenhouse gas balance," Ecological Modelling, Elsevier, vol. 417(C).

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