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Visualizing data through curvilinear representations of matrices

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  • Sewell, Daniel K.

Abstract

Most high dimensional data visualization techniques embed or project the data onto a low dimensional space which is then used for viewing. Results are thus limited by how much of the information in the data can be conveyed in two or three dimensions. Methods11An R package implementing the proposed methodology is provided in the supplementary material.are described for a lossless functional representation of any real matrix that can capture key features of the data, such as distances and correlations. This approach can be used to visualize both subjects and variables as curves, allowing one to see patterns of subjects, patterns of variables, and how the subject and variable patterns relate to one another. A theoretical justification is provided for this approach, and various facets of the method’s usefulness are illustrated on both synthetic and real data sets.

Suggested Citation

  • Sewell, Daniel K., 2018. "Visualizing data through curvilinear representations of matrices," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 255-270.
  • Handle: RePEc:eee:csdana:v:128:y:2018:i:c:p:255-270
    DOI: 10.1016/j.csda.2018.07.010
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    1. Ash A. Alizadeh & Michael B. Eisen & R. Eric Davis & Chi Ma & Izidore S. Lossos & Andreas Rosenwald & Jennifer C. Boldrick & Hajeer Sabet & Truc Tran & Xin Yu & John I. Powell & Liming Yang & Gerald E, 2000. "Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling," Nature, Nature, vol. 403(6769), pages 503-511, February.
    2. Carl Eckart & Gale Young, 1936. "The approximation of one matrix by another of lower rank," Psychometrika, Springer;The Psychometric Society, vol. 1(3), pages 211-218, September.
    3. Alexander Strehl & Joydeep Ghosh, 2003. "Relationship-Based Clustering and Visualization for High-Dimensional Data Mining," INFORMS Journal on Computing, INFORMS, vol. 15(2), pages 208-230, May.
    4. Unwin, Antony & Volinsky, Chris & Winkler, Sylvia, 2003. "Parallel coordinates for exploratory modelling analysis," Computational Statistics & Data Analysis, Elsevier, vol. 43(4), pages 553-564, August.
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