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Spatial birth–death–move processes: Basic properties and estimation of their intensity functions

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  • Frédéric Lavancier
  • Ronan Le Guével

Abstract

Many spatiotemporal data record the time of birth and death of individuals, along with their spatial trajectories during their lifetime, whether through continuous‐time observations or discrete‐time observations. Natural applications include epidemiology, individual‐based modelling in ecology, spatiotemporal dynamics observed in bioimaging and computer vision. The aim of this article is to estimate in this context the birth and death intensity functions that depend in full generality on the current spatial configuration of all alive individuals. While the temporal evolution of the population size is a simple birth–death process, observing the lifetime and trajectories of all individuals calls for a new paradigm. To formalise this framework, we introduce spatial birth–death–move processes, where the birth and death dynamics depends on the current spatial configuration of the population and where individuals can move during their lifetime according to a continuous Markov process with possible interactions. We consider non‐parametric kernel estimators of their birth and death intensity functions. The setting is original because each observation in time belongs to a non‐vectorial, infinite dimensional space and the dependence between observations is barely tractable. We prove the consistency of the estimators in the presence of continuous‐time and discrete‐time observations, under fairly simple conditions. We moreover discuss how we can take advantage in practice of structural assumptions made on the intensity functions and we explain how data‐driven bandwidth selection can be conducted, despite the unknown (and sometimes undefined) second order moments of the estimators. We finally apply our statistical method to the analysis of the spatiotemporal dynamics of proteins involved in exocytosis in cells, providing new insights on this complex mechanism.

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  • Frédéric Lavancier & Ronan Le Guével, 2021. "Spatial birth–death–move processes: Basic properties and estimation of their intensity functions," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 83(4), pages 798-825, September.
  • Handle: RePEc:bla:jorssb:v:83:y:2021:i:4:p:798-825
    DOI: 10.1111/rssb.12452
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    References listed on IDEAS

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    1. Renshaw, Eric & Sarkka, Aila, 2001. "Gibbs point processes for studying the development of spatial-temporal stochastic processes," Computational Statistics & Data Analysis, Elsevier, vol. 36(1), pages 85-105, March.
    2. Sarkka, Aila & Renshaw, Eric, 2006. "The analysis of marked point patterns evolving through space and time," Computational Statistics & Data Analysis, Elsevier, vol. 51(3), pages 1698-1718, December.
    3. Romain Azaïs & François Dufour & Anne Gégout-Petit, 2014. "Non-Parametric Estimation of the Conditional Distribution of the Interjumping Times for Piecewise-Deterministic Markov Processes," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 41(4), pages 950-969, December.
    4. Ronald W. Wolff, 1965. "Problems of Statistical Inference for Birth and Death Queuing Models," Operations Research, INFORMS, vol. 13(3), pages 343-357, June.
    5. Frédéric Lavancier & Thierry Pécot & Liu Zengzhen & Charles Kervrann, 2020. "Testing independence between two random sets for the analysis of colocalization in bioimaging," Biometrics, The International Biometric Society, vol. 76(1), pages 36-46, March.
    6. Häbel, Henrike & Myllymäki, Mari & Pommerening, Arne, 2019. "New insights on the behaviour of alternative types of individual-based tree models for natural forests," Ecological Modelling, Elsevier, vol. 406(C), pages 23-32.
    7. Peter Diggle, 1985. "A Kernel Method for Smoothing Point Process Data," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 34(2), pages 138-147, June.
    8. Guan, Yongtao, 2008. "On Consistent Nonparametric Intensity Estimation for Inhomogeneous Spatial Point Processes," Journal of the American Statistical Association, American Statistical Association, vol. 103(483), pages 1238-1247.
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    1. Valeriy Naumov, 2024. "A Matrix-Multiplicative Solution for Multi-Dimensional QBD Processes," Mathematics, MDPI, vol. 12(3), pages 1-15, January.

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