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Bayesian bivariate survival analysis using the power variance function copula

Author

Listed:
  • Jose S. Romeo

    (University of Santiago
    Massey University)

  • Renate Meyer

    (University of Auckland)

  • Diego I. Gallardo

    (Universidad de Atacama)

Abstract

Copula models have become increasingly popular for modelling the dependence structure in multivariate survival data. The two-parameter Archimedean family of Power Variance Function (PVF) copulas includes the Clayton, Positive Stable (Gumbel) and Inverse Gaussian copulas as special or limiting cases, thus offers a unified approach to fitting these important copulas. Two-stage frequentist procedures for estimating the marginal distributions and the PVF copula have been suggested by Andersen (Lifetime Data Anal 11:333–350, 2005), Massonnet et al. (J Stat Plann Inference 139(11):3865–3877, 2009) and Prenen et al. (J R Stat Soc Ser B 79(2):483–505, 2017) which first estimate the marginal distributions and conditional on these in a second step to estimate the PVF copula parameters. Here we explore an one-stage Bayesian approach that simultaneously estimates the marginal and the PVF copula parameters. For the marginal distributions, we consider both parametric as well as semiparametric models. We propose a new method to simulate uniform pairs with PVF dependence structure based on conditional sampling for copulas and on numerical approximation to solve a target equation. In a simulation study, small sample properties of the Bayesian estimators are explored. We illustrate the usefulness of the methodology using data on times to appendectomy for adult twins in the Australian NH&MRC Twin registry. Parameters of the marginal distributions and the PVF copula are simultaneously estimated in a parametric as well as a semiparametric approach where the marginal distributions are modelled using Weibull and piecewise exponential distributions, respectively.

Suggested Citation

  • Jose S. Romeo & Renate Meyer & Diego I. Gallardo, 2018. "Bayesian bivariate survival analysis using the power variance function copula," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 24(2), pages 355-383, April.
  • Handle: RePEc:spr:lifeda:v:24:y:2018:i:2:d:10.1007_s10985-017-9396-1
    DOI: 10.1007/s10985-017-9396-1
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    References listed on IDEAS

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    1. Leen Prenen & Roel Braekers & Luc Duchateau, 2017. "Extending the Archimedean copula methodology to model multivariate survival data grouped in clusters of variable size," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 79(2), pages 483-505, March.
    2. Tianle Hu & Bin Nan & Xihong Lin & James M. Robins, 2011. "Time-dependent cross ratio estimation for bivariate failure times," Biometrika, Biometrika Trust, vol. 98(2), pages 341-354.
    3. Joseph G. Ibrahim & Ming-Hui Chen & Debajyoti Sinha, 2001. "Bayesian Semiparametric Models for Survival Data with a Cure Fraction," Biometrics, The International Biometric Society, vol. 57(2), pages 383-388, June.
    4. David J. Spiegelhalter & Nicola G. Best & Bradley P. Carlin & Angelika Van Der Linde, 2002. "Bayesian measures of model complexity and fit," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 64(4), pages 583-639, October.
    5. Klara Goethals & Paul Janssen & Luc Duchateau, 2008. "Frailty models and copulas: similarities and differences," Journal of Applied Statistics, Taylor & Francis Journals, vol. 35(9), pages 1071-1079.
    6. Huard, David & Evin, Guillaume & Favre, Anne-Catherine, 2006. "Bayesian copula selection," Computational Statistics & Data Analysis, Elsevier, vol. 51(2), pages 809-822, November.
    7. C. Paddy Farrington & Steffen Unkel & Karim Anaya-Izquierdo, 2012. "The relative frailty variance and shared frailty models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 74(4), pages 673-696, September.
    8. Joe, Harry, 2005. "Asymptotic efficiency of the two-stage estimation method for copula-based models," Journal of Multivariate Analysis, Elsevier, vol. 94(2), pages 401-419, June.
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    Cited by:

    1. Eleanderson Campos & Roel Braekers & Devanil J. Souza & Lucas M. Chaves, 2021. "Factor copula models for right-censored clustered survival data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 27(3), pages 499-535, July.
    2. Petti, Danilo & Eletti, Alessia & Marra, Giampiero & Radice, Rosalba, 2022. "Copula link-based additive models for bivariate time-to-event outcomes with general censoring scheme," Computational Statistics & Data Analysis, Elsevier, vol. 175(C).

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