IDEAS home Printed from https://ideas.repec.org/a/taf/japsta/v41y2014i8p1814-1829.html
   My bibliography  Save this article

Bayesian model selection in linear mixed effects models with autoregressive(p) errors using mixture priors

Author

Listed:
  • Tsai-Hung Fan
  • Yi-Fu Wang
  • Yi-Chen Zhang

Abstract

In this article, we apply the Bayesian approach to the linear mixed effect models with autoregressive(p) random errors under mixture priors obtained with the Markov chain Monte Carlo (MCMC) method. The mixture structure of a point mass and continuous distribution can help to select the variables in fixed and random effects models from the posterior sample generated using the MCMC method. Bayesian prediction of future observations is also one of the major concerns. To get the best model, we consider the commonly used highest posterior probability model and the median posterior probability model. As a result, both criteria tend to be needed to choose the best model from the entire simulation study. In terms of predictive accuracy, a real example confirms that the proposed method provides accurate results.

Suggested Citation

  • Tsai-Hung Fan & Yi-Fu Wang & Yi-Chen Zhang, 2014. "Bayesian model selection in linear mixed effects models with autoregressive(p) errors using mixture priors," Journal of Applied Statistics, Taylor & Francis Journals, vol. 41(8), pages 1814-1829, August.
  • Handle: RePEc:taf:japsta:v:41:y:2014:i:8:p:1814-1829
    DOI: 10.1080/02664763.2014.894001
    as

    Download full text from publisher

    File URL: http://hdl.handle.net/10.1080/02664763.2014.894001
    Download Restriction: Access to full text is restricted to subscribers.

    File URL: https://libkey.io/10.1080/02664763.2014.894001?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    2. Zhen Chen & David B. Dunson, 2003. "Random Effects Selection in Linear Mixed Models," Biometrics, The International Biometric Society, vol. 59(4), pages 762-769, December.
    3. Dries Benoit & Rahim Alhamzawi & Keming Yu, 2013. "Bayesian lasso binary quantile regression," Computational Statistics, Springer, vol. 28(6), pages 2861-2873, December.
    4. Satkartar K. Kinney & David B. Dunson, 2007. "Fixed and Random Effects Selection in Linear and Logistic Models," Biometrics, The International Biometric Society, vol. 63(3), pages 690-698, September.
    5. Chib, Siddhartha, 1993. "Bayes regression with autoregressive errors : A Gibbs sampling approach," Journal of Econometrics, Elsevier, vol. 58(3), pages 275-294, August.
    6. Howard D. Bondell & Arun Krishna & Sujit K. Ghosh, 2010. "Joint Variable Selection for Fixed and Random Effects in Linear Mixed-Effects Models," Biometrics, The International Biometric Society, vol. 66(4), pages 1069-1077, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Joseph G. Ibrahim & Hongtu Zhu & Ramon I. Garcia & Ruixin Guo, 2011. "Fixed and Random Effects Selection in Mixed Effects Models," Biometrics, The International Biometric Society, vol. 67(2), pages 495-503, June.
    2. Simona Buscemi & Antonella Plaia, 2020. "Model selection in linear mixed-effect models," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 104(4), pages 529-575, December.
    3. Mojtaba Ganjali & Taban Baghfalaki, 2018. "Application of Penalized Mixed Model in Identification of Genes in Yeast Cell-Cycle Gene Expression Data," Biostatistics and Biometrics Open Access Journal, Juniper Publishers Inc., vol. 6(2), pages 38-41, April.
    4. Daniel R. Kowal, 2023. "Subset selection for linear mixed models," Biometrics, The International Biometric Society, vol. 79(3), pages 1853-1867, September.
    5. Mingan Yang & Min Wang & Guanghui Dong, 2020. "Bayesian variable selection for mixed effects model with shrinkage prior," Computational Statistics, Springer, vol. 35(1), pages 227-243, March.
    6. Yang, Mingan, 2012. "Bayesian variable selection for logistic mixed model with nonparametric random effects," Computational Statistics & Data Analysis, Elsevier, vol. 56(9), pages 2663-2674.
    7. Abhik Ghosh & Magne Thoresen, 2018. "Non-concave penalization in linear mixed-effect models and regularized selection of fixed effects," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 102(2), pages 179-210, April.
    8. Alhamzawi, Rahim, 2016. "Bayesian model selection in ordinal quantile regression," Computational Statistics & Data Analysis, Elsevier, vol. 103(C), pages 68-78.
    9. Imori, Shinpei & Rosen, Dietrich von, 2015. "Covariance components selection in high-dimensional growth curve model with random coefficients," Journal of Multivariate Analysis, Elsevier, vol. 136(C), pages 86-94.
    10. Howard D. Bondell & Arun Krishna & Sujit K. Ghosh, 2010. "Joint Variable Selection for Fixed and Random Effects in Linear Mixed-Effects Models," Biometrics, The International Biometric Society, vol. 66(4), pages 1069-1077, December.
    11. Armagan, Artin & Dunson, David, 2011. "Sparse variational analysis of linear mixed models for large data sets," Statistics & Probability Letters, Elsevier, vol. 81(8), pages 1056-1062, August.
    12. Ping Wu & Xinchao Luo & Peirong Xu & Lixing Zhu, 2017. "New variable selection for linear mixed-effects models," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 69(3), pages 627-646, June.
    13. Kramlinger, Peter & Schneider, Ulrike & Krivobokova, Tatyana, 2023. "Uniformly valid inference based on the Lasso in linear mixed models," Journal of Multivariate Analysis, Elsevier, vol. 198(C).
    14. Ling Zhou & Huazhen Lin & Xinyuan Song & Yi Li, 2014. "Selection of Latent Variables for Multiple Mixed-outcome Models," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 41(4), pages 1064-1082, December.
    15. Luoying Yang & Tong Tong Wu, 2023. "Model‐based clustering of high‐dimensional longitudinal data via regularization," Biometrics, The International Biometric Society, vol. 79(2), pages 761-774, June.
    16. Shakhawat Hossain & Trevor Thomson & Ejaz Ahmed, 2018. "Shrinkage estimation in linear mixed models for longitudinal data," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 81(5), pages 569-586, July.
    17. Peirong Xu & Lixing Zhu & Yi Li, 2014. "Ultrahigh dimensional time course feature selection," Biometrics, The International Biometric Society, vol. 70(2), pages 356-365, June.
    18. Gerhard Tutz & Gunther Schauberger, 2015. "A Penalty Approach to Differential Item Functioning in Rasch Models," Psychometrika, Springer;The Psychometric Society, vol. 80(1), pages 21-43, March.
    19. Zhang, Yan-Qing & Tian, Guo-Liang & Tang, Nian-Sheng, 2016. "Latent variable selection in structural equation models," Journal of Multivariate Analysis, Elsevier, vol. 152(C), pages 190-205.
    20. Zhao, Kaifeng & Lian, Heng, 2016. "The Expectation–Maximization approach for Bayesian quantile regression," Computational Statistics & Data Analysis, Elsevier, vol. 96(C), pages 1-11.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:taf:japsta:v:41:y:2014:i:8:p:1814-1829. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Chris Longhurst (email available below). General contact details of provider: http://www.tandfonline.com/CJAS20 .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.