IDEAS home Printed from https://ideas.repec.org/a/spr/compst/v29y2014i3p489-513.html
   My bibliography  Save this article

Discriminative variable selection for clustering with the sparse Fisher-EM algorithm

Author

Listed:
  • Charles Bouveyron
  • Camille Brunet-Saumard

Abstract

The interest in variable selection for clustering has increased recently due to the growing need in clustering high-dimensional data. Variable selection allows in particular to ease both the clustering and the interpretation of the results. Existing approaches have demonstrated the importance of variable selection for clustering but turn out to be either very time consuming or not sparse enough in high-dimensional spaces. This work proposes to perform a selection of the discriminative variables by introducing sparsity in the loading matrix of the Fisher-EM algorithm. This clustering method has been recently proposed for the simultaneous visualization and clustering of high-dimensional data. It is based on a latent mixture model which fits the data into a low-dimensional discriminative subspace. Three different approaches are proposed in this work to introduce sparsity in the orientation matrix of the discriminative subspace through $$\ell _{1}$$ ℓ 1 -type penalizations. Experimental comparisons with existing approaches on simulated and real-world data sets demonstrate the interest of the proposed methodology. An application to the segmentation of hyperspectral images of the planet Mars is also presented. Copyright Springer-Verlag Berlin Heidelberg 2014

Suggested Citation

  • Charles Bouveyron & Camille Brunet-Saumard, 2014. "Discriminative variable selection for clustering with the sparse Fisher-EM algorithm," Computational Statistics, Springer, vol. 29(3), pages 489-513, June.
  • Handle: RePEc:spr:compst:v:29:y:2014:i:3:p:489-513
    DOI: 10.1007/s00180-013-0433-6
    as

    Download full text from publisher

    File URL: http://hdl.handle.net/10.1007/s00180-013-0433-6
    Download Restriction: Access to full text is restricted to subscribers.

    File URL: https://libkey.io/10.1007/s00180-013-0433-6?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Richard Bellman, 1957. "On a Dynamic Programming Approach to the Caterer Problem--I," Management Science, INFORMS, vol. 3(3), pages 270-278, April.
    2. Galimberti, Giuliano & Montanari, Angela & Viroli, Cinzia, 2009. "Penalized factor mixture analysis for variable selection in clustered data," Computational Statistics & Data Analysis, Elsevier, vol. 53(12), pages 4301-4310, October.
    3. Bouveyron, C. & Girard, S. & Schmid, C., 2007. "High-dimensional data clustering," Computational Statistics & Data Analysis, Elsevier, vol. 52(1), pages 502-519, September.
    4. McLachlan, G. J. & Peel, D. & Bean, R. W., 2003. "Modelling high-dimensional data by mixtures of factor analyzers," Computational Statistics & Data Analysis, Elsevier, vol. 41(3-4), pages 379-388, January.
    5. Sijian Wang & Ji Zhu, 2008. "Variable Selection for Model-Based High-Dimensional Clustering and Its Application to Microarray Data," Biometrics, The International Biometric Society, vol. 64(2), pages 440-448, June.
    6. Witten, Daniela M. & Tibshirani, Robert, 2010. "A Framework for Feature Selection in Clustering," Journal of the American Statistical Association, American Statistical Association, vol. 105(490), pages 713-726.
    7. Robert Tibshirani & Guenther Walther & Trevor Hastie, 2001. "Estimating the number of clusters in a data set via the gap statistic," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 63(2), pages 411-423.
    8. Hui Zou & Trevor Hastie, 2005. "Addendum: Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(5), pages 768-768, November.
    9. Raftery, Adrian E. & Dean, Nema, 2006. "Variable Selection for Model-Based Clustering," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 168-178, March.
    10. Hui Zou & Trevor Hastie, 2005. "Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(2), pages 301-320, April.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Nickolay Trendafilov & Martin Kleinsteuber & Hui Zou, 2014. "Sparse matrices in data analysis," Computational Statistics, Springer, vol. 29(3), pages 403-405, June.
    2. Gilles Celeux & Cathy Maugis-Rabusseau & Mohammed Sedki, 2019. "Variable selection in model-based clustering and discriminant analysis with a regularization approach," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(1), pages 259-278, March.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Bouveyron, Charles & Brunet-Saumard, Camille, 2014. "Model-based clustering of high-dimensional data: A review," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 52-78.
    2. Floriello, Davide & Vitelli, Valeria, 2017. "Sparse clustering of functional data," Journal of Multivariate Analysis, Elsevier, vol. 154(C), pages 1-18.
    3. Arias-Castro, Ery & Pu, Xiao, 2017. "A simple approach to sparse clustering," Computational Statistics & Data Analysis, Elsevier, vol. 105(C), pages 217-228.
    4. Alessandro Casa & Andrea Cappozzo & Michael Fop, 2022. "Group-Wise Shrinkage Estimation in Penalized Model-Based Clustering," Journal of Classification, Springer;The Classification Society, vol. 39(3), pages 648-674, November.
    5. Mihee Lee & Haipeng Shen & Jianhua Z. Huang & J. S. Marron, 2010. "Biclustering via Sparse Singular Value Decomposition," Biometrics, The International Biometric Society, vol. 66(4), pages 1087-1095, December.
    6. Peña, Daniel & Prieto Fernández, Francisco Javier & Rendon Aguirre, Janeth Carolina, 2017. "Clustering Big Data by Extreme Kurtosis Projections," DES - Working Papers. Statistics and Econometrics. WS 24522, Universidad Carlos III de Madrid. Departamento de Estadística.
    7. Bouveyron, Charles & Brunet, Camille, 2012. "Theoretical and practical considerations on the convergence properties of the Fisher-EM algorithm," Journal of Multivariate Analysis, Elsevier, vol. 109(C), pages 29-41.
    8. Kim, Nam-Hwui & Browne, Ryan P., 2021. "In the pursuit of sparseness: A new rank-preserving penalty for a finite mixture of factor analyzers," Computational Statistics & Data Analysis, Elsevier, vol. 160(C).
    9. Satre-Meloy, Aven & Diakonova, Marina & Grünewald, Philipp, 2020. "Cluster analysis and prediction of residential peak demand profiles using occupant activity data," Applied Energy, Elsevier, vol. 260(C).
    10. Andrews, Jeffrey L. & McNicholas, Paul D. & Subedi, Sanjeena, 2011. "Model-based classification via mixtures of multivariate t-distributions," Computational Statistics & Data Analysis, Elsevier, vol. 55(1), pages 520-529, January.
    11. Gaynor, Sheila & Bair, Eric, 2017. "Identification of relevant subtypes via preweighted sparse clustering," Computational Statistics & Data Analysis, Elsevier, vol. 116(C), pages 139-154.
    12. Gilles Celeux & Cathy Maugis-Rabusseau & Mohammed Sedki, 2019. "Variable selection in model-based clustering and discriminant analysis with a regularization approach," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(1), pages 259-278, March.
    13. Šárka Brodinová & Peter Filzmoser & Thomas Ortner & Christian Breiteneder & Maia Rohm, 2019. "Robust and sparse k-means clustering for high-dimensional data," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(4), pages 905-932, December.
    14. Lee, Kyu Ha & Chakraborty, Sounak & Sun, Jianguo, 2017. "Variable selection for high-dimensional genomic data with censored outcomes using group lasso prior," Computational Statistics & Data Analysis, Elsevier, vol. 112(C), pages 1-13.
    15. Thierry Chekouo & Alejandro Murua, 2018. "High-dimensional variable selection with the plaid mixture model for clustering," Computational Statistics, Springer, vol. 33(3), pages 1475-1496, September.
    16. Pedro Galeano & Daniel Peña, 2019. "Data science, big data and statistics," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(2), pages 289-329, June.
    17. Tutz, Gerhard & Pößnecker, Wolfgang & Uhlmann, Lorenz, 2015. "Variable selection in general multinomial logit models," Computational Statistics & Data Analysis, Elsevier, vol. 82(C), pages 207-222.
    18. Oxana Babecka Kucharcukova & Jan Bruha, 2016. "Nowcasting the Czech Trade Balance," Working Papers 2016/11, Czech National Bank.
    19. Carstensen, Kai & Heinrich, Markus & Reif, Magnus & Wolters, Maik H., 2020. "Predicting ordinary and severe recessions with a three-state Markov-switching dynamic factor model," International Journal of Forecasting, Elsevier, vol. 36(3), pages 829-850.
    20. Hou-Tai Chang & Ping-Huai Wang & Wei-Fang Chen & Chen-Ju Lin, 2022. "Risk Assessment of Early Lung Cancer with LDCT and Health Examinations," IJERPH, MDPI, vol. 19(8), pages 1-12, April.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:compst:v:29:y:2014:i:3:p:489-513. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.