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Bayesian function registration with random truncation

Author

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  • Yi Lu
  • Radu Herbei
  • Sebastian Kurtek

Abstract

In this work, we develop a new set of Bayesian models to perform registration of real-valued functions. A Gaussian process prior is assigned to the parameter space of time warping functions, and a Markov chain Monte Carlo (MCMC) algorithm is utilized to explore the posterior distribution. While the proposed model can be defined on the infinite-dimensional function space in theory, dimension reduction is needed in practice because one cannot store an infinite-dimensional function on the computer. Existing Bayesian models often rely on some pre-specified, fixed truncation rule to achieve dimension reduction, either by fixing the grid size or the number of basis functions used to represent a functional object. In comparison, the new models in this paper randomize the truncation rule. Benefits of the new models include the ability to make inference on the smoothness of the functional parameters, a data-informative feature of the truncation rule, and the flexibility to control the amount of shape-alteration in the registration process. For instance, using both simulated and real data, we show that when the observed functions exhibit more local features, the posterior distribution on the warping functions automatically concentrates on a larger number of basis functions. Supporting materials including code and data to perform registration and reproduce some of the results presented herein are available online.

Suggested Citation

  • Yi Lu & Radu Herbei & Sebastian Kurtek, 2023. "Bayesian function registration with random truncation," PLOS ONE, Public Library of Science, vol. 18(7), pages 1-19, July.
  • Handle: RePEc:plo:pone00:0287734
    DOI: 10.1371/journal.pone.0287734
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    References listed on IDEAS

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    1. J. O. Ramsay & X. Wang & R. Flanagan, 1995. "A Functional Data Analysis of the Pinch Force of Human Fingers," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 44(1), pages 17-30, March.
    2. Sebastian Kurtek & Anuj Srivastava & Eric Klassen & Zhaohua Ding, 2012. "Statistical Modeling of Curves Using Shapes and Related Features," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(499), pages 1152-1165, September.
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