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The Genetic Architecture of the Human Corpus Callosum and its Subregions

Author

Listed:
  • Ravi R. Bhatt

    (University of Southern California)

  • Shruti P. Gadewar

    (University of Southern California)

  • Ankush Shetty

    (University of Southern California)

  • Iyad Ba Gari

    (University of Southern California)

  • Elizabeth Haddad

    (University of Southern California)

  • Shayan Javid

    (University of Southern California)

  • Abhinaav Ramesh

    (University of Southern California)

  • Elnaz Nourollahimoghadam

    (University of Southern California)

  • Alyssa H. Zhu

    (University of Southern California)

  • Christiaan Leeuw

    (VU University)

  • Paul M. Thompson

    (University of Southern California)

  • Sarah E. Medland

    (QIMR Berghofer Medical Research Institute)

  • Neda Jahanshad

    (University of Southern California)

Abstract

The corpus callosum (CC) is the largest set of white matter fibers connecting the two hemispheres of the brain. In humans, it is essential for coordinating sensorimotor responses and performing associative or executive functions. Identifying which genetic variants underpin CC morphometry can provide molecular insights into the CC’s role in mediating cognitive processes. We developed and used an artificial intelligence based tool to extract the midsagittal CC’s total and regional area and thickness in two large public datasets. We performed a genome-wide association study (GWAS) meta-analysis of European participants (combined N = 46,685) with generalization to the non-European participants (combined N = 7040). Post-GWAS analyses implicated prenatal intracellular organization and cell growth patterns, and high heritability in regions of open chromatin. Results suggest programmed cell death mediated by the immune system drives the thinning of the posterior body and isthmus. Genetic overlap, and causal genetic liability, between the CC, cerebral cortex features, and neuropsychiatric disorders such as attention-deficit/hyperactivity, bipolar disorders, and Parkinson’s disease were identified.

Suggested Citation

  • Ravi R. Bhatt & Shruti P. Gadewar & Ankush Shetty & Iyad Ba Gari & Elizabeth Haddad & Shayan Javid & Abhinaav Ramesh & Elnaz Nourollahimoghadam & Alyssa H. Zhu & Christiaan Leeuw & Paul M. Thompson & , 2025. "The Genetic Architecture of the Human Corpus Callosum and its Subregions," Nature Communications, Nature, vol. 16(1), pages 1-20, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-64791-3
    DOI: 10.1038/s41467-025-64791-3
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    as
    1. Christiaan A de Leeuw & Joris M Mooij & Tom Heskes & Danielle Posthuma, 2015. "MAGMA: Generalized Gene-Set Analysis of GWAS Data," PLOS Computational Biology, Public Library of Science, vol. 11(4), pages 1-19, April.
    2. Kyoko Watanabe & Maša Umićević Mirkov & Christiaan A. Leeuw & Martijn P. Heuvel & Danielle Posthuma, 2019. "Genetic mapping of cell type specificity for complex traits," Nature Communications, Nature, vol. 10(1), pages 1-13, December.
    3. Clare Bycroft & Colin Freeman & Desislava Petkova & Gavin Band & Lloyd T. Elliott & Kevin Sharp & Allan Motyer & Damjan Vukcevic & Olivier Delaneau & Jared O’Connell & Adrian Cortes & Samantha Welsh &, 2018. "The UK Biobank resource with deep phenotyping and genomic data," Nature, Nature, vol. 562(7726), pages 203-209, October.
    4. Ami Okada & Frédéric Charron & Steves Morin & David S. Shin & Karen Wong & Pierre J. Fabre & Marc Tessier-Lavigne & Susan K. McConnell, 2006. "Boc is a receptor for sonic hedgehog in the guidance of commissural axons," Nature, Nature, vol. 444(7117), pages 369-373, November.
    5. Joana A. Revez & Tian Lin & Zhen Qiao & Angli Xue & Yan Holtz & Zhihong Zhu & Jian Zeng & Huanwei Wang & Julia Sidorenko & Kathryn E. Kemper & Anna A. E. Vinkhuyzen & Julanne Frater & Darryl Eyles & T, 2020. "Genome-wide association study identifies 143 loci associated with 25 hydroxyvitamin D concentration," Nature Communications, Nature, vol. 11(1), pages 1-12, December.
    6. Kyoko Watanabe & Erdogan Taskesen & Arjen Bochoven & Danielle Posthuma, 2017. "Functional mapping and annotation of genetic associations with FUMA," Nature Communications, Nature, vol. 8(1), pages 1-11, December.
    7. Zhihong Zhu & Zhili Zheng & Futao Zhang & Yang Wu & Maciej Trzaskowski & Robert Maier & Matthew R. Robinson & John J. McGrath & Peter M. Visscher & Naomi R. Wray & Jian Yang, 2018. "Causal associations between risk factors and common diseases inferred from GWAS summary data," Nature Communications, Nature, vol. 9(1), pages 1-12, December.
    8. Christiaan de Leeuw & Josefin Werme & Jeanne E Savage & Wouter J Peyrot & Danielle Posthuma, 2023. "On the interpretation of transcriptome-wide association studies," PLOS Genetics, Public Library of Science, vol. 19(9), pages 1-23, September.
    9. Rebecca D. Hodge & Trygve E. Bakken & Jeremy A. Miller & Kimberly A. Smith & Eliza R. Barkan & Lucas T. Graybuck & Jennie L. Close & Brian Long & Nelson Johansen & Osnat Penn & Zizhen Yao & Jeroen Egg, 2019. "Conserved cell types with divergent features in human versus mouse cortex," Nature, Nature, vol. 573(7772), pages 61-68, September.
    10. Suijuan Zhong & Shu Zhang & Xiaoying Fan & Qian Wu & Liying Yan & Ji Dong & Haofeng Zhang & Long Li & Le Sun & Na Pan & Xiaohui Xu & Fuchou Tang & Jun Zhang & Jie Qiao & Xiaoqun Wang, 2018. "A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex," Nature, Nature, vol. 555(7697), pages 524-528, March.
    11. R. J. Wheeler & E. Gluenz & K. Gull, 2015. "Basal body multipotency and axonemal remodelling are two pathways to a 9+0 flagellum," Nature Communications, Nature, vol. 6(1), pages 1-12, December.
    12. Vassily Trubetskoy & Antonio F. Pardiñas & Ting Qi & Georgia Panagiotaropoulou & Swapnil Awasthi & Tim B. Bigdeli & Julien Bryois & Chia-Yen Chen & Charlotte A. Dennison & Lynsey S. Hall & Max Lam & K, 2022. "Mapping genomic loci implicates genes and synaptic biology in schizophrenia," Nature, Nature, vol. 604(7906), pages 502-508, April.
    13. Hastie, Nicholas D. & van der Loos, Matthijs J. H. M. & Vitart, Veronique & Völzke, Henry & Wellmann, Jürgen & Yu, Lei & Zhao, Wei & Allik, Jüri & Attia, John R. & Bandinelli, Stefania & Bastardot,, 2013. "GWAS of 126,559 Individuals Identifies Genetic Variants Associated with Educational Attainment," Scholarly Articles 13383543, Harvard University Department of Economics.
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