IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v56y2012i12p4348-4365.html
   My bibliography  Save this article

A semiparametric Bayesian approach to generalized partial linear mixed models for longitudinal data

Author

Listed:
  • Tang, Nian-Sheng
  • Duan, Xing-De

Abstract

A generalized partial linear mixed model (GPLMM) is a natural extension of generalized linear mixed models (GLMMs) and partial linear models (PLMs). Almost all existing methods for analyzing GPLMMs are developed on the basis of the assumption that random effects are distributed as a fully parametric distribution such as normal distribution. In this paper, we extend the GPLMMs by specifying a Dirichlet process prior for a general distribution of random effects, and propose a semiparametric Bayesian approach by simultaneously utilizing an approximation truncation Dirichlet process prior of the random effects and a P-spline approximation of the smoothing function. By combining the block Gibbs sampler and the Metropolis–Hastings algorithm, a hybrid algorithm is presented for sampling observations from the posterior distribution. A procedure for selecting the degree of the polynomial components in nonparametric approximation using Bayes factor is given via path sampling. Some goodness-of-fit statistics are proposed to evaluate the plausibility of the posited model. Several simulation studies and a real example are presented to illustrate the proposed methodologies.

Suggested Citation

  • Tang, Nian-Sheng & Duan, Xing-De, 2012. "A semiparametric Bayesian approach to generalized partial linear mixed models for longitudinal data," Computational Statistics & Data Analysis, Elsevier, vol. 56(12), pages 4348-4365.
  • Handle: RePEc:eee:csdana:v:56:y:2012:i:12:p:4348-4365
    DOI: 10.1016/j.csda.2012.03.018
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0167947312001442
    Download Restriction: Full text for ScienceDirect subscribers only.

    File URL: https://libkey.io/10.1016/j.csda.2012.03.018?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. He, Xuming & Fung, Wing K. & Zhu, Zhongyi, 2005. "Robust Estimation in Generalized Partial Linear Models for Clustered Data," Journal of the American Statistical Association, American Statistical Association, vol. 100, pages 1176-1184, December.
    2. Chen, Xue-Dong & Tang, Nian-Sheng, 2010. "Bayesian analysis of semiparametric reproductive dispersion mixed-effects models," Computational Statistics & Data Analysis, Elsevier, vol. 54(9), pages 2145-2158, September.
    3. Guo You Qin & Zhong Yi Zhu, 2009. "Robustified Maximum Likelihood Estimation in Generalized Partial Linear Mixed Model for Longitudinal Data," Biometrics, The International Biometric Society, vol. 65(1), pages 52-59, March.
    4. Ruppert,David & Wand,M. P. & Carroll,R. J., 2003. "Semiparametric Regression," Cambridge Books, Cambridge University Press, number 9780521780506.
    5. Elizabeth R. Brown & Joseph G. Ibrahim, 2003. "A Bayesian Semiparametric Joint Hierarchical Model for Longitudinal and Survival Data," Biometrics, The International Biometric Society, vol. 59(2), pages 221-228, June.
    6. Qin, Guoyou & Zhu, Zhongyi, 2007. "Robust estimation in generalized semiparametric mixed models for longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 98(8), pages 1658-1683, September.
    7. Sik-Yum Lee, 2006. "Bayesian Analysis of Nonlinear Structural Equation Models with Nonignorable Missing Data," Psychometrika, Springer;The Psychometric Society, vol. 71(3), pages 541-564, September.
    8. Hua Liang, 2009. "Generalized partially linear mixed-effects models incorporating mismeasured covariates," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 61(1), pages 27-46, March.
    9. X. Lin & D. Zhang, 1999. "Inference in generalized additive mixed modelsby using smoothing splines," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 61(2), pages 381-400, April.
    10. Ruppert,David & Wand,M. P. & Carroll,R. J., 2003. "Semiparametric Regression," Cambridge Books, Cambridge University Press, number 9780521785167.
    11. Inyoung Kim & Noah D. Cohen & Raymond J. Carroll, 2003. "Semiparametric Regression Splines in Matched Case-Control Studies," Biometrics, The International Biometric Society, vol. 59(4), pages 1158-1169, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Dengke Xu & Zhongzhan Zhang & Liucang Wu, 2014. "Bayesian analysis of joint mean and covariance models for longitudinal data," Journal of Applied Statistics, Taylor & Francis Journals, vol. 41(11), pages 2504-2514, November.
    2. Nian-Sheng Tang & De-Wang Li & An-Min Tang, 2017. "Semiparametric Bayesian inference on generalized linear measurement error models," Statistical Papers, Springer, vol. 58(4), pages 1091-1113, December.
    3. Li, Yang & Zhao, Hui & Sun, Jianguo & Kim, KyungMann, 2014. "Nonparametric tests for panel count data with unequal observation processes," Computational Statistics & Data Analysis, Elsevier, vol. 73(C), pages 103-111.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Tang, Nian-Sheng & Duan, Xing-De, 2014. "Bayesian influence analysis of generalized partial linear mixed models for longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 126(C), pages 86-99.
    2. Chen, Xue-Dong & Tang, Nian-Sheng, 2010. "Bayesian analysis of semiparametric reproductive dispersion mixed-effects models," Computational Statistics & Data Analysis, Elsevier, vol. 54(9), pages 2145-2158, September.
    3. Hannes Matuschek & Reinhold Kliegl & Matthias Holschneider, 2015. "Smoothing Spline ANOVA Decomposition of Arbitrary Splines: An Application to Eye Movements in Reading," PLOS ONE, Public Library of Science, vol. 10(3), pages 1-15, March.
    4. Øystein Sørensen & Anders M. Fjell & Kristine B. Walhovd, 2023. "Longitudinal Modeling of Age-Dependent Latent Traits with Generalized Additive Latent and Mixed Models," Psychometrika, Springer;The Psychometric Society, vol. 88(2), pages 456-486, June.
    5. Jinsong Chen & Inyoung Kim & George R. Terrell & Lei Liu, 2014. "Generalised partial linear single-index mixed models for repeated measures data," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 26(2), pages 291-303, June.
    6. Tang, Niansheng & Wu, Ying & Chen, Dan, 2018. "Semiparametric Bayesian analysis of transformation linear mixed models," Journal of Multivariate Analysis, Elsevier, vol. 166(C), pages 225-240.
    7. Xu, Dengke & Zhang, Zhongzhan, 2013. "A semiparametric Bayesian approach to joint mean and variance models," Statistics & Probability Letters, Elsevier, vol. 83(7), pages 1624-1631.
    8. Takuma Yoshida, 2016. "Asymptotics and smoothing parameter selection for penalized spline regression with various loss functions," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 70(4), pages 278-303, November.
    9. Bravo, Francesco, 2015. "Semiparametric estimation with missing covariates," Journal of Multivariate Analysis, Elsevier, vol. 139(C), pages 329-346.
    10. Klein, Nadja & Denuit, Michel & Lang, Stefan & Kneib, Thomas, 2013. "Nonlife Ratemaking and Risk Management with Bayesian Additive Models for Location, Scale and Shape," LIDAM Discussion Papers ISBA 2013045, Université catholique de Louvain, Institute of Statistics, Biostatistics and Actuarial Sciences (ISBA).
    11. Otto-Sobotka, Fabian & Salvati, Nicola & Ranalli, Maria Giovanna & Kneib, Thomas, 2019. "Adaptive semiparametric M-quantile regression," Econometrics and Statistics, Elsevier, vol. 11(C), pages 116-129.
    12. Timothy K.M. Beatty & Erling Røed Larsen, 2005. "Using Engel curves to estimate bias in the Canadian CPI as a cost of living index," Canadian Journal of Economics/Revue canadienne d'économique, John Wiley & Sons, vol. 38(2), pages 482-499, May.
    13. Arthur Charpentier & Emmanuel Flachaire & Antoine Ly, 2017. "Econom\'etrie et Machine Learning," Papers 1708.06992, arXiv.org, revised Mar 2018.
    14. Hyunju Son & Youyi Fong, 2021. "Fast grid search and bootstrap‐based inference for continuous two‐phase polynomial regression models," Environmetrics, John Wiley & Sons, Ltd., vol. 32(3), May.
    15. Michael Wegener & Göran Kauermann, 2017. "Forecasting in nonlinear univariate time series using penalized splines," Statistical Papers, Springer, vol. 58(3), pages 557-576, September.
    16. Dlugosz, Stephan & Mammen, Enno & Wilke, Ralf A., 2017. "Generalized partially linear regression with misclassified data and an application to labour market transitions," Computational Statistics & Data Analysis, Elsevier, vol. 110(C), pages 145-159.
    17. Bernhard Baumgartner & Daniel Guhl & Thomas Kneib & Winfried J. Steiner, 2018. "Flexible estimation of time-varying effects for frequently purchased retail goods: a modeling approach based on household panel data," OR Spectrum: Quantitative Approaches in Management, Springer;Gesellschaft für Operations Research e.V., vol. 40(4), pages 837-873, October.
    18. Xiao Ni & Daowen Zhang & Hao Helen Zhang, 2010. "Variable Selection for Semiparametric Mixed Models in Longitudinal Studies," Biometrics, The International Biometric Society, vol. 66(1), pages 79-88, March.
    19. Zi Ye & Giles Hooker & Stephen P. Ellner, 2021. "Generalized Single Index Models and Jensen Effects on Reproduction and Survival," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 26(3), pages 492-512, September.
    20. Ferraccioli, Federico & Sangalli, Laura M. & Finos, Livio, 2022. "Some first inferential tools for spatial regression with differential regularization," Journal of Multivariate Analysis, Elsevier, vol. 189(C).

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:56:y:2012:i:12:p:4348-4365. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.