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A semi-parametric approach for mixture models: Application to local false discovery rate estimation

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  • Robin, Stephane
  • Bar-Hen, Avner
  • Daudin, Jean-Jacques
  • Pierre, Laurent

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  • Robin, Stephane & Bar-Hen, Avner & Daudin, Jean-Jacques & Pierre, Laurent, 2007. "A semi-parametric approach for mixture models: Application to local false discovery rate estimation," Computational Statistics & Data Analysis, Elsevier, vol. 51(12), pages 5483-5493, August.
    • Handle: RePEc:eee:csdana:v:51:y:2007:i:12:p:5483-5493
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    References listed on IDEAS

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    1. Allison, David B. & Gadbury, Gary L. & Heo, Moonseong & Fernandez, Jose R. & Lee, Cheol-Koo & Prolla, Tomas A. & Weindruch, Richard, 2002. "A mixture model approach for the analysis of microarray gene expression data," Computational Statistics & Data Analysis, Elsevier, vol. 39(1), pages 1-20, March.
    2. Priebe, Carey E. & Marchette, David J., 2000. "Alternating kernel and mixture density estimates," Computational Statistics & Data Analysis, Elsevier, vol. 35(1), pages 43-65, November.
    3. Marco Di Marzio, 2004. "Boosting kernel density estimates: A bias reduction technique?," Biometrika, Biometrika Trust, vol. 91(1), pages 226-233, March.
    4. Efron B. & Tibshirani R. & Storey J.D. & Tusher V., 2001. "Empirical Bayes Analysis of a Microarray Experiment," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1151-1160, December.
    5. Smyth Gordon K, 2004. "Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 3(1), pages 1-28, February.
    6. Paul Delmar & Stéphane Robin & Diana Tronik‐Le Roux & Jean Jacques Daudin, 2005. "Mixture model on the variance for the differential analysis of gene expression data," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 54(1), pages 31-50, January.
    7. John D. Storey & Jonathan E. Taylor & David Siegmund, 2004. "Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: a unified approach," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 66(1), pages 187-205, February.
    8. Efron, Bradley, 2004. "Large-Scale Simultaneous Hypothesis Testing: The Choice of a Null Hypothesis," Journal of the American Statistical Association, American Statistical Association, vol. 99, pages 96-104, January.
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    Cited by:

    1. Volant, Stevenn & Martin Magniette, Marie-Laure & Robin, Stéphane, 2012. "Variational Bayes approach for model aggregation in unsupervised classification with Markovian dependency," Computational Statistics & Data Analysis, Elsevier, vol. 56(8), pages 2375-2387.
    2. C Matias & T Rebafka & F Villers, 2018. "A semiparametric extension of the stochastic block model for longitudinal networks," Biometrika, Biometrika Trust, vol. 105(3), pages 665-680.
    3. Jaspers, Stijn & Aerts, Marc & Verbeke, Geert & Beloeil, Pierre-Alexandre, 2014. "A new semi-parametric mixture model for interval censored data, with applications in the field of antimicrobial resistance," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 30-42.
    4. Allison, David B. & Visscher, Peter M. & Rosa, Guilherme J.M. & Amos, Christopher I., 2009. "Statistical genetics & statistical genomics: Where biology, epistemology, statistics, and computation collide," Computational Statistics & Data Analysis, Elsevier, vol. 53(5), pages 1531-1534, March.
    5. Rohit Kumar Patra & Bodhisattva Sen, 2016. "Estimation of a two-component mixture model with applications to multiple testing," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 78(4), pages 869-893, September.
    6. David R. Bickel, 2013. "Minimax-Optimal Strength of Statistical Evidence for a Composite Alternative Hypothesis," International Statistical Review, International Statistical Institute, vol. 81(2), pages 188-206, August.
    7. Marot Guillemette & Mayer Claus-Dieter, 2009. "Sequential Analysis for Microarray Data Based on Sensitivity and Meta-Analysis," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 8(1), pages 1-33, January.
    8. Friguet, Chloé & Causeur, David, 2011. "Estimation of the proportion of true null hypotheses in high-dimensional data under dependence," Computational Statistics & Data Analysis, Elsevier, vol. 55(9), pages 2665-2676, September.
    9. Park, DoHwan & Park, Junyong & Zhong, Xiaosong & Sadelain, Michel, 2011. "Estimation of empirical null using a mixture of normals and its use in local false discovery rate," Computational Statistics & Data Analysis, Elsevier, vol. 55(7), pages 2421-2432, July.
    10. Rostyslav Maiboroda & Olena Sugakova, 2012. "Nonparametric density estimation for symmetric distributions by contaminated data," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 75(1), pages 109-126, January.

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